Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma18g00069 | ATGGCAACTGTGCTCGACTCCCGTTTCTTGGCGCTTACTGCCATTGTCACTATCGGATATCAACTATTGTTCTTTATAGTCACAGCTCTTCTCAAGTTCGACAAAGTCACTGATTTTGCTGGCAGCACAAATTTTGTGATAATTGCTATTTTGACTCTAGTTCTTAAGGGTAGCTGGCATTTTAGACAGGTTGTTCTGTCTTTTCTTGTGGTGGCATGGGGTCTTCGTCTTGGTTTTTTCCTGCTAATGAGGATTTTGCAATGGGGAGAGGACCGGCGTTTTGATGAAATGCGTAGTAATTTGGGAAAATTAGCAGTTTTCTGGATATTTCAGGCTGTTTGGGTCTGGACCGTGAGTTTACCTGTCACAGTGGTCAATGGAAGCAATAACAATCCACCTCTCCAAGCTGCGGATGTAATTGGGTGGATTATGTGGTTAGTGGGTGTTGTATTCGAAGCTACAGCTGACCAACAAAAGCTGACATTTAAAAACTCTCCAGAAAATCGGGGGAAGTGGTGCAATGTTGGACTTTGGAAGGTCACTCGTCATCCTAATTACTTTGGTGAGATCTTTCTTTGGTGGGGAATCTTCGTTGCTTCCACACCCGTTCTGGAAGGTGCTGAGTGGCTTGTGATACTTGGGCCAATTTTCCTCACATTGTTGCTTCTCTTCGTCAGTGGGATCCCTCTCCTCGAGGAATCAGCAGATAAGAAGTTCGGAAATGTGACTGAATATGTACAGTATAAAAGAAAGACCAGCGCCCTCATCCCACTACCTACCGCAATATACGCAAATCTTCCCTCGTGGTTCAAGAAAATTTTTCTATTTGAATTTCCTTTTTACAGCCGCAATCTTCCCCGGGATGGGCTAAACTGA | 876 | 44.06 | MATVLDSRFLALTAIVTIGYQLLFFIVTALLKFDKVTDFAGSTNFVIIAILTLVLKGSWHFRQVVLSFLVVAWGLRLGFFLLMRILQWGEDRRFDEMRSNLGKLAVFWIFQAVWVWTVSLPVTVVNGSNNNPPLQAADVIGWIMWLVGVVFEATADQQKLTFKNSPENRGKWCNVGLWKVTRHPNYFGEIFLWWGIFVASTPVLEGAEWLVILGPIFLTLLLLFVSGIPLLEESADKKFGNVTEYVQYKRKTSALIPLPTAIYANLPSWFKKIFLFEFPFYSRNLPRDGLN | 291 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 292522 | 297092 | + | CmaCh18G000690.1 | Cma18g00069 | 313407 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma18g00069 | 291 | Gene3D | - | 58 | 258 | - | - | |
| Cma18g00069 | 291 | PANTHER | - | 5 | 290 | - | - | |
| Cma18g00069 | 291 | ProSiteProfiles | Steroid 5-alpha reductase C-terminal domain profile. | 141 | 209 | IPR001104 | GO:0006629|GO:0016627 | |
| Cma18g00069 | 291 | PANTHER | 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE | 5 | 290 | IPR010721 | - | |
| Cma18g00069 | 291 | Pfam | Protein of unknown function (DUF1295) | 24 | 252 | IPR010721 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cma13g00996 | Cma18g00069 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma06g00932 | Cma-Chr6:6302208 | Cma18g00069 | Cma-Chr18:292522 | 5.31E-14 | dispersed | |
| Cma18g00069 | Cma-Chr18:292522 | Cma13g00996 | Cma-Chr13:7694080 | 7.39E-135 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma18g00069 | - | - | bhj:120083299 | 534.643 |