Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00148 ATGGCTTTCCCTTTTCTTTTTCTCATTGTCCTCTCCGTCCCCGTCTCCGTCGACTCGAAACTCACCCTCGGTTATTACCAAAAAACATGTCCCAACTTCGAGAAGATCATCCGCGAGACCGTCACCAATAAACAAATCAATAGTCCAGTTACTGCCGCAGGAACCCTACGACTCTTCTTTCATGACTGCATGGTCGATGGTTGCGATGCCTCTGTCCTCATTTCCTCCAATACCTTCAACAAAGCCGAACGTGAGGCCGATATCAACCATTCCCTCTCTGGGGATGCCTTTGATGTCATCATTCATGCCAAAACCAACCTCGAACTCGTCTGTCCTGGCATTGTATCTTGTTCTGATATCTTAGCTCAGGCGACTCGGGATTTGGTGGTGATGGTTGGAGGTCCGTTCTACAACGTTCGATTAGGGAGAAAAGATGGGATGATATCAAAATTAGAGAATGTGGAAGGGAACCTCCCATTAGTGAGCGATTCAGTGGACCAACTCATTGATATGTTCGCCGGAAAAGGGTTCACGACCAAAGAATTGGTGGCACTGTCCGGCGGCCATACCATCGGATTCTCCCACTGCAAGGAGTTCGCCGGCCGCCTCTTCAATTTCAGCGCCACCACACCCACTGACCCAGACATTTACCCAAAATTCGCCGAGAAACTCAAGGTCATGTGCGGTAATTTTCAAAAGGACTCCGACATGTCAGCATTCAACGACGTAATGACACCTGGCAAATTCGACAACATGTACTTTCAGAATCTGCCACGTGGACTTGGATTATTGGCTACTGACAATGCGCTAGGTAAGGATCCGAGGACCAAGCCGTTTGTGGATATGTACGCCGTGAACCAGACGGCGTTTTTTAACGACTTCGCTCACGCTATGGAGAAACTCAGTATTCACGGCGTTAAGACGGGAAGGAAAGGGGAAGTTCGGCGAAGGTGTGATTTGTTCAATTCTATTAAGACATAA 981 48.22 MAFPFLFLIVLSVPVSVDSKLTLGYYQKTCPNFEKIIRETVTNKQINSPVTAAGTLRLFFHDCMVDGCDASVLISSNTFNKAEREADINHSLSGDAFDVIIHAKTNLELVCPGIVSCSDILAQATRDLVVMVGGPFYNVRLGRKDGMISKLENVEGNLPLVSDSVDQLIDMFAGKGFTTKELVALSGGHTIGFSHCKEFAGRLFNFSATTPTDPDIYPKFAEKLKVMCGNFQKDSDMSAFNDVMTPGKFDNMYFQNLPRGLGLLATDNALGKDPRTKPFVDMYAVNQTAFFNDFAHAMEKLSIHGVKTGRKGEVRRRCDLFNSIKT 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 760016 761245 - CmaCh18G001480.1 Cma18g00148 313486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00148 326 PANTHER PEROXIDASE 41 5 326 - -
Cma18g00148 326 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 SUPERFAMILY Heme-dependent peroxidases 21 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Cma18g00148 326 Gene3D Peroxidase, domain 2 159 301 - -
Cma18g00148 326 ProSiteProfiles Plant heme peroxidase family profile. 20 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 PANTHER - 5 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cma18g00148 326 Gene3D - 24 322 - -
Cma18g00148 326 Pfam Peroxidase 40 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma18g00148 326 CDD secretory_peroxidase 20 321 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01064 Cma-Chr11:5836905 Cma18g00148 Cma-Chr18:760016 1.32E-138 dispersed
Cma20g01022 Cma-Chr20:7265817 Cma18g00148 Cma-Chr18:760016 3.22E-95 dispersed
Cma10g00148 Cma-Chr10:676861 Cma18g00148 Cma-Chr18:760016 2.83E-156 wgd
Cma11g00115 Cma-Chr11:619576 Cma18g00148 Cma-Chr18:760016 1.54E-128 wgd
Cma13g00904 Cma-Chr13:7246240 Cma18g00148 Cma-Chr18:760016 0 wgd
Cma14g00629 Cma-Chr14:3113042 Cma18g00148 Cma-Chr18:760016 7.81E-141 wgd
Cma18g00148 Cma-Chr18:760016 Cma04g02725 Cma-Chr4:18364076 1.46E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00148 K00430 - csv:101220163 558.91