Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00278 ATGGACGGTTGGACGTCACTCGGAGGCGTTCTTCTGAGTATAACAGGCACAGAGGCTTTATTTGCGGATCTAGCTCATTTTCGTGTAGCTGCTATACAGATTGCTTTTACAGTATTTGTTTTTCCTTGCCTTCTCTTGGCATATTCTGGACAAGCTGCCTATCTTATGAGCAATATGGAGCATGTCCATGATGTCTTCTATCGTTCAATCCCAGAGTCCATATATTGGCCAGTGTTTCTTGTGGCAACTGCTGCTGCTATAGTTGCTAGTCAAGCCACTATATCTGCAACATTTTCAATAATCAAGCAGGCTCTTGCTCATGGCTGCTTTCCAAGGGTTAAAGTTGTTCATACCTCGAAGAACTTTCTTGGTCAGATATATGTTCCTGATATTAACTGGATCCTCATGGTTCTTTGCATTGCTGTGACAGCAGGATTTAAGAATCAAAGTCAAATTGGAAATGCTTATGGGACAGCAGTGGTGGTAGTCATGCTTGTGACCACACTGCTTATGATTCTAATCATGATCTTGGTATGGCGCTGTCATTGGGTCATCGCCCTGATCTTCACCGGTCTGTCGCTAATCGTGGAGTGCAGTTACTTTTCTGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTACCCCTTGTGATTGCTGCAGCCTTTCTTATCATCATGTATGTGTGGCATTATGGTACTGTTAAACGATACGAATTCGAGCTGCACAGTAAAGTTTCAATGGCATGGGTTCTCGGTCTTGGTCCGAGTCTAGGATTAGTCCGTGTTCCTGGGATTGGACTTGTATATACTGAGCTAGCAAGCGGCGTACCTCACATATTTTCCCATTTCATTACGAATCTGCCCGCCATCCATTCCGTTGTCGTGTTTGTTTGCGTGAAATACCTTCCAGTCTACACCGTTCCAGAGGAAGAACGATACCTGGTAAAGCGGATAGGACCAAAGAACTTCCACATGTTTCGTTGTGTCGCGAGATACGGTTATAAAGACCTCCACAAAAAGGATGATGACTTTGAGAAGAAGCTTTTTGATAGCATCTTCCTGTTTGTTAGGCTTGAATCCATGATGGAAGGTTGTTCAGACTCTGATGAGTACAGTTTATATGGTCAGCAAACTGAGCATTCAAGGGATGGCCTATTGATTGGCACCAATGGAAATGCAACTACATCCAATGGGGACATGACATTCTCATCGGTTGACTCGATCGTGCCTGTTCGATCTCCGGTGCGTTCGAATAACACGGTAAGGTCATCTGGGCAGGCAAGCAACCATACGGATAGCGACGAGATTGAGTTCTTGATTAGGTGTAGAGATGCAGGGGTGGTGCATATATTGGGGAACACTGTAATTAGAGCAAGAAGGGAATCAAAATTCTACAAGAAGATAGCTGTGGATTATATATATGCATTTCTTAGAAAGATTTGCAGGGAGAACAGTGTGATTTTCAATGTTCCTCATGAGAGTTTATTAAACGTTGGTCAAATTTTCTATGTATAG 1515 43.5 MDGWTSLGGVLLSITGTEALFADLAHFRVAAIQIAFTVFVFPCLLLAYSGQAAYLMSNMEHVHDVFYRSIPESIYWPVFLVATAAAIVASQATISATFSIIKQALAHGCFPRVKVVHTSKNFLGQIYVPDINWILMVLCIAVTAGFKNQSQIGNAYGTAVVVVMLVTTLLMILIMILVWRCHWVIALIFTGLSLIVECSYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERYLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTEHSRDGLLIGTNGNATTSNGDMTFSSVDSIVPVRSPVRSNNTVRSSGQASNHTDSDEIEFLIRCRDAGVVHILGNTVIRARRESKFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1459966 1463319 - CmaCh18G002780.1 Cma18g00278 313616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00278 504 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 503 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma18g00278 504 Pfam K+ potassium transporter 2 336 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma18g00278 504 PANTHER POTASSIUM TRANSPORTER 1 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00855 Cma-Chr13:7042516 Cma18g00278 Cma-Chr18:1459966 0 dispersed
Cma18g00278 Cma-Chr18:1459966 Cma11g01561 Cma-Chr11:10170172 0 dispersed
Cma13g00853 Cma-Chr13:7035994 Cma18g00278 Cma-Chr18:1459966 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00278 K03549 - csv:101217915 913.679