Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00279 TTGTGTTCATCTATCCAAGTATATTTTGATGTTCTTGTTAAACTTCTTGGATTGCTCTGTTCATCGATGCTCCAAGCTGGGGTTTCTGCTGATTTGAAATTTAAAGATCAGGCATCCTTGTTAACTAAGATGACTTCGAGAGGGGAAAGCGATGGGGACTCTGAAATGAAGGGAAGCATGTGGGTTTTGGACCAGAAACTCGATCAACCAATGGATGAAGAAGCTGGGAGGCTTAACAATATGTACAAAGAAAAGAAATTCTCGGTATTGTTGCTTCTTCGACTTGCATATCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGGACTTCTCCCCTCTACGTTTTTTACAATACATTTCCTCATGGAATTTCTGATCCGGAAGATGTAGTTGGAGCTCTTTCATTGATTATTTACTCTCTCACTCTCATTCCTCTCATAAAATATGTATTTATCGTGTGTAAAGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTCTACTCCTTGCTATGTCGTCATGCAAATGTAAAAACTATTCCGAACCAACATCGAAAGGATGAGGAGCTAACAACATATAGCCGCTCTAAGTTTCACGAGCAATCGTTTGCTGCTAAAACTAAAGGATGGCTTGAAAGACAATCATCCAGGAAGAATGCGTTGCTCATTCTTGTTCTTGTTGGCACTTCTATGGTTGTTGGAGATGGAATTCTCACTCCTGCAATATCGGGTATTGTTTATTTTCGAGTAATCACTCCGAAGGCCCCGACTTAG 771 40.47 LCSSIQVYFDVLVKLLGLLCSSMLQAGVSADLKFKDQASLLTKMTSRGESDGDSEMKGSMWVLDQKLDQPMDEEAGRLNNMYKEKKFSVLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGISDPEDVVGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHANVKTIPNQHRKDEELTTYSRSKFHEQSFAAKTKGWLERQSSRKNALLILVLVGTSMVVGDGILTPAISGIVYFRVITPKAPT 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1464937 1466209 - CmaCh18G002790.1 Cma18g00279 313617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00279 256 Pfam K+ potassium transporter 97 242 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma18g00279 256 PANTHER POTASSIUM TRANSPORTER 45 243 - -
Cma18g00279 256 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 45 243 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00279 Cma-Chr18:1464937 Cma13g00855 Cma-Chr13:7042516 1.59E-131 dispersed
Cma18g00279 Cma-Chr18:1464937 Cma13g00853 Cma-Chr13:7035994 6.18E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00279 K03549 - csv:101217915 375.17