Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00330 ATGACAGATGGAAAAAGTGGAGCAAATGTCTGTAAATATGCCCAAAATTTCCGAGGAAGGAGATGGGAGAATTACTCTGGTTCTGATTCAAACATCACTCCCTTGGAGGAAATGTCTGCTTATTGGTGGAAGACCTTCGCTGGGGATGAAGATCGACCGGAGAAGCCTCGGCGATGTGGAGTTACAGAGATGAGAAGTCCCCATTACACTCTCTCTAGCCAAAATGTGATTCAGGAAATTTTCGAGTCGATGGGTCAATTTGTTGATGGATTAAAGTTCTCCGGAGGTTCACACAGCCTGTTGCCGAGGGAGTTTGTGAAAGAGGTGACGGAAATGGCTCATCGACATGACATTTATGTCAGTACGGGTGACTGGGCGGAGCATTTACTTCGCAAAGGTCCGTCGGGTTTCAAAGAGTATGTGGAGGAATGCAAGCTCATGGGATTTGATACTATTGAGCTTAACGTAGACTCACTTGAAGTTCCTGAAGAAACTCTTCTGAGATATGTGCGCTTGATTAAGAACGGTGGCCTTAGGGCTAAGCCTCAATTTGCAGTGAAGTTCAATAAGTCGGACATTCCCGCTGGCGATCGAGCATTTGGAGCTTATATTGTTCCAAGACCTCGATCTTCTGAACTGGTAGAGGATGTTGATCTTTTGATCAGAAGGGCTGAGAGATGCCTAGAAGCTGGGGCAGACATGATAATGATCGATGCAGACGATGTCAGTAAACACACTGATTCTCTTCGAGCAGACATTATTGCCAAGATCATTGGACGTCTTGGCCTAGAGAAAACGATGTTTGAAGCATCGAATCCCAAAACATTGGAGTGGTTTATCAATCAATACAGCTCAAAGGTGAATCTCTTTGTGGATCACTCCCAAGTTATGGAACTTGAGTGCCTTCGGGGCCGCAACCTGGGAGGCGGCGAGTCACAGAAGCTTGACCAATCTAACGACGAGAGAAGAAAGAAGGCGATCGTCTCTGGTCCGCGAGCGAGGGAGAGAGCAGTGAGAAGAACCGTCAGACCTTCAGATCGGACTAGTTTCGATCGCCCTACATCGTGGGGAAATCCAATGAACAGGTCGGACCATCGGTCTAGGCCGCATTCATCTCCGGCAATCAGTCATTTTGATGACAAAACTCCATTTCTCGCTCCTGCTGCACATATTGGCCGAAATTTCGATGAGGATGAAAGGAAGCCTCTGGGCGGTGTAACACCTCCACGTCGAACTATCAGTGATGAGAGCATTAGGGTTCTTCCTAGTCGTTCAGAGTTAAAGCCTGACTATGAATCAAGTGGGAGGCAGAGGATGGCTCCAATGTCGCAGTTTCCAACTTCTGGTGCAGTAAATTCGTACGCAGGGAGAGTTGGTGAAGCGCTCCACTCAGGTGTTGCTCCTCAGAATTCAGGTGGAGGCAGCGGGATGGCTTTTTCTGGGGCTCATCCAAATGCATGGCAAGTAAGGAAGGAGGTGGTTTCTGTGGTTAAAGAACATTCTCATTCTGCGTGGGCTGGACCTAGCGCTGTCTCAAAGCTTGCTCATGCTAGTGCTCTCGAAAAGGTGTCTTCAGGGAGATGGCAGTCACAAACATCTGTCGGTTATCAAACTGATGTGGTCGTTGTCGCATCTTCTGAACCAGATATTAAAGTTCAGTCAAAGGGTTATGGTAGTTCCTTTGACAGGGTTGATGTATTGTATGGTAGGGAACTTCGTGATGCTTCATTAGCTAGGCATGCAGGAAGACAACTGGACATAGATGATGGAACTGAGGGAAATAGACAAGATTTTTCCGAGCGTGATAGGGTTGTAGTTGCTAAATATCATGCTGTTAAAGATAGATCTTCTAAAATGGATGTTTCTGTAGTTCAGCATTCTGAGCCTAATCAAATGGCTGGCGGGGGTCCAGTAGTATCGGAACGCCCAAAGTTGAAATTACTTCCAAGAACAAAGCCATTAGCAGGTTCAGAACCCATTGTTACTGATAACAAGCAGATGATTCCTGATGCTGTTTCTGCTGAAAATGTGAATGAAGTGCATGGAAATTCAAATTATTTGAAACCTAGTTCAGCTGGTTCTGAGAGTGGGAAGGAAGGAATTGATCGTCCAAAATTGAACCTGAAGCCCCGGTCACAACCCATTGAACAACTGGAGGGAAGTAGGGGGAGAGGCAGGATTTCTGTGTTTGGTGGTGCTCGCCCACGGGAGCAGGTTCTGAAGGAACGGGGGGTTGATAACACCACTAATAACAACCATGATCTTGTTCAAAATTCCGGAAGGATTGAAGAAAACATTTCAAGAACTGAAAGGGTTCAAGGGCCCCCAGTTCCTGTGCATCGAACTGGAAAAACAGGGCAGGGTAAGGAAGGTGAGAGAAGGGATAACAGGGCAGATCCAGAGATGCAAAGGAGGAATTTCTCTGATAATCGAAGGAGGGATCGAGACACTGAAAGACAGCAGCAGCAGCAGCTTGAGCGGCCACCTTCTCCAGAGACATGGCGCAAGCCTGTTGAGCAGCAGCCAAAACCTGCCTCGAACTCTACCGACGTGCGTCCTGGGAAAGTAGCTTCAGCACTTGAGCTGGCTCAAGCCTTCTCTAGGTCGGTTTCGGATTCAAACGTGGCCGATAGGGTTCCCAGTCAAAGCAACCTCCCAGGACGGTCTCAGATGCCTTTTTCTCGGCTTATGGGGTCATCCTCTAGACCTCAAATCAATGGTTATTAA 2727 47.41 MTDGKSGANVCKYAQNFRGRRWENYSGSDSNITPLEEMSAYWWKTFAGDEDRPEKPRRCGVTEMRSPHYTLSSQNVIQEIFESMGQFVDGLKFSGGSHSLLPREFVKEVTEMAHRHDIYVSTGDWAEHLLRKGPSGFKEYVEECKLMGFDTIELNVDSLEVPEETLLRYVRLIKNGGLRAKPQFAVKFNKSDIPAGDRAFGAYIVPRPRSSELVEDVDLLIRRAERCLEAGADMIMIDADDVSKHTDSLRADIIAKIIGRLGLEKTMFEASNPKTLEWFINQYSSKVNLFVDHSQVMELECLRGRNLGGGESQKLDQSNDERRKKAIVSGPRARERAVRRTVRPSDRTSFDRPTSWGNPMNRSDHRSRPHSSPAISHFDDKTPFLAPAAHIGRNFDEDERKPLGGVTPPRRTISDESIRVLPSRSELKPDYESSGRQRMAPMSQFPTSGAVNSYAGRVGEALHSGVAPQNSGGGSGMAFSGAHPNAWQVRKEVVSVVKEHSHSAWAGPSAVSKLAHASALEKVSSGRWQSQTSVGYQTDVVVVASSEPDIKVQSKGYGSSFDRVDVLYGRELRDASLARHAGRQLDIDDGTEGNRQDFSERDRVVVAKYHAVKDRSSKMDVSVVQHSEPNQMAGGGPVVSERPKLKLLPRTKPLAGSEPIVTDNKQMIPDAVSAENVNEVHGNSNYLKPSSAGSESGKEGIDRPKLNLKPRSQPIEQLEGSRGRGRISVFGGARPREQVLKERGVDNTTNNNHDLVQNSGRIEENISRTERVQGPPVPVHRTGKTGQGKEGERRDNRADPEMQRRNFSDNRRRDRDTERQQQQQLERPPSPETWRKPVEQQPKPASNSTDVRPGKVASALELAQAFSRSVSDSNVADRVPSQSNLPGRSQMPFSRLMGSSSRPQINGY 908
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1762238 1771134 + CmaCh18G003300.1 Cma18g00330 313668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00330 908 PANTHER OS07G0546100 PROTEIN 341 908 - -
Cma18g00330 908 MobiDBLite consensus disorder prediction 680 908 - -
Cma18g00330 908 MobiDBLite consensus disorder prediction 315 347 - -
Cma18g00330 908 MobiDBLite consensus disorder prediction 785 822 - -
Cma18g00330 908 MobiDBLite consensus disorder prediction 307 380 - -
Cma18g00330 908 Gene3D Aldolase class I 49 310 IPR013785 -
Cma18g00330 908 MobiDBLite consensus disorder prediction 744 763 - -
Cma18g00330 908 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 51 306 IPR003830 -
Cma18g00330 908 MobiDBLite consensus disorder prediction 396 416 - -
Cma18g00330 908 MobiDBLite consensus disorder prediction 348 362 - -
Cma18g00330 908 MobiDBLite consensus disorder prediction 864 908 - -
Cma18g00330 908 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 50 303 IPR036112 -
Cma18g00330 908 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 341 908 IPR010433 GO:0003743
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00702 Cma-Chr13:6365200 Cma18g00330 Cma-Chr18:1762238 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00330 - - cmos:111434321 854.744