Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00370 ATGGCGGCTCTGAAACTCCCAATTCTTCTCCACTTCTTCTCCCTTCTTTTCTTCTCCATATCCGCCGTCGATTTCGTCTTTAATGGCTTCAATTCCACCGATCTCTTCCTCTACGGCAACGCCACCGTCGAATCCCCTGTTCTTGCGCTCACAAACCAAACAAGTTTCTCAATTGGCCGCGCTCTGTACCCATCCAAAATCCCCACAAAGAACTCCAATTCCTCAACGGTTTTCCCTTTCTCCACTTCTTTCATCTTCGCCATGGCTCCTTTCAAGGATCTCCTCCCCGGTCATGGCTTCGTTTTCATCTTCGTTCCGGCCACTGGAATCACCGGCACAGCCTCTGCTCAGAATTTAGGGTTTTTGAACTTCACGCTCAATGGAAACCCTAATAACCATGTTTTTGGAATTGAATTCGATGTGTTTGCTAATCCGGAATTCAATGATCCAGATGATAATCATGTCGGAATTAATTTGAATTCCTTGACCTCTAATTTCACCGGAGTTGCTGGGTTTTGGTCGGACGGCGGCTCGTTCAGTAGTTTCCGGCTTAATAGCGGCGGAAACTACCAAGTCTGGGTTGATTATTCCGATTTTGAGATGAACGTTACGATGGCTCCGGCGGGGATGAAAAAGCCACGGCGGCCGTTGATTAACGCCTCCCTGAATCTCTCGGAGATTTTCTTAGACGAAATGTACGTGGGGTTCACGAGCGCCACCGGCCAGTTAGTTCAAGGTCACAACATCTTAGCATGGAGTTTTAGCAACACCAATTTTTCATTAAGCGAGAGTTTGGTTACCATTGGATTGCCCTCCTTCTTTCTCCCAAAAGACCCATTTACGGAGTCGAAATGGTTCATCGCCGCCGTGACGGTTGGCGGATTTCTAGTTCTTTGTTTTATTGTTGGGACTTTGGGGATTTTGATCGCCGACCACCGGAGGAGAGCGAGGGCGAGAGCTGAAATGGAGGATTGGGAATTTGAGTATTGGCCGCATCGAATCACATATCAAGAAATTGAATCAGCGACGAAAGGATTTGCTGAAGAAAATGTGATCGGAATCGGTGGGAATGGGAAAGTTCATAAAGGGGTTTTGGCCGGAGGAGGTTTAGAAGTTGCAGTGAAGCGAATTTCTCATGAAAACGACGGGATGCGGGAGTTCATATCTGAAATCACGAGCATAGGGAGATTGAAGCACAGGAATCTTGTTAGTTTGAGAGGTTGGTGTAAGAAAGAGAAAGGAAATTTCTTACTAGTTTACGATTACATGGAAAATGGAAGCTTAGACAAATGGATATTCAATTGTGACGAGACAAACATGTTGAGCTACGATGATCGAATCAGAATATTGAAAAACGTAGCCTCAGGAGTGTTATATTTACACGAAGGATGGGAATCAAAGGTTCTTCACAGGGACATAAAAGCCAGCAATGTGTTACTAGACAAGGACATGAATGGAAGGCTAGGAGATTTTGGGTTGGCTCGAGTCCACAGCCATGCCCAAGTGGCTAGCACGACTAGGGTTGTTGGGACGATGGGTTACATCGCACCTGAGTTGGTTCGGAGCGGACGAGTCTCAGCTCAATCAGACGTGTTTAGTTTTGGTGTCTTGATTCTAGAAGTGATGTGTGGGAAGAGACCAATTGAGGAAGGAAAGCCACTGTTACTAGATTGGGTTCAACAGTTGGTCGTCGAAGGGGAGTTGACTGCAGCACTCGATGGGAGGTTGAGGAAGAAGGGTGGGTGGAATGAGGAGGAAATGAAGAGAGTGCTGCATTTGGGATTGTTGTGTGCACATGTTAACCCAAACGCTCGACCGACGATGAGGCAAATAGTGAAAATTTTGGAAGGAAAGGTTGAGTTGGATGCGAATGAGAGTATAAACGCTTATTTAGTACAAAGATTGAAATCACCGAGGATGTGGTATGATTCAAGTGCTGATTTTGGGCATACATTGCATCATCCAACTTTTGAGGATTTTCTTCGCTCTTCTTCAACTTCCCTCTCTTGGTCAGCTTCCACTATCGCTTTCAGGTAA 2037 45.9 MAALKLPILLHFFSLLFFSISAVDFVFNGFNSTDLFLYGNATVESPVLALTNQTSFSIGRALYPSKIPTKNSNSSTVFPFSTSFIFAMAPFKDLLPGHGFVFIFVPATGITGTASAQNLGFLNFTLNGNPNNHVFGIEFDVFANPEFNDPDDNHVGINLNSLTSNFTGVAGFWSDGGSFSSFRLNSGGNYQVWVDYSDFEMNVTMAPAGMKKPRRPLINASLNLSEIFLDEMYVGFTSATGQLVQGHNILAWSFSNTNFSLSESLVTIGLPSFFLPKDPFTESKWFIAAVTVGGFLVLCFIVGTLGILIADHRRRARARAEMEDWEFEYWPHRITYQEIESATKGFAEENVIGIGGNGKVHKGVLAGGGLEVAVKRISHENDGMREFISEITSIGRLKHRNLVSLRGWCKKEKGNFLLVYDYMENGSLDKWIFNCDETNMLSYDDRIRILKNVASGVLYLHEGWESKVLHRDIKASNVLLDKDMNGRLGDFGLARVHSHAQVASTTRVVGTMGYIAPELVRSGRVSAQSDVFSFGVLILEVMCGKRPIEEGKPLLLDWVQQLVVEGELTAALDGRLRKKGGWNEEEMKRVLHLGLLCAHVNPNARPTMRQIVKILEGKVELDANESINAYLVQRLKSPRMWYDSSADFGHTLHHPTFEDFLRSSSTSLSWSASTIAFR 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2011296 2013332 + CmaCh18G003700.1 Cma18g00370 313708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00370 678 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Cma18g00370 678 CDD lectin_legume_LecRK_Arcelin_ConA 23 257 IPR001220 GO:0030246
Cma18g00370 678 ProSiteProfiles Protein kinase domain profile. 346 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma18g00370 678 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Cma18g00370 678 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Cma18g00370 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 262 IPR013320 -
Cma18g00370 678 Pfam Protein kinase domain 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma18g00370 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Cma18g00370 678 Gene3D Transferase(Phosphotransferase) domain 1 423 633 - -
Cma18g00370 678 Gene3D - 21 264 - -
Cma18g00370 678 SMART serkin_6 346 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma18g00370 678 PANTHER - 15 670 - -
Cma18g00370 678 CDD STKc_IRAK 352 617 - -
Cma18g00370 678 Pfam Legume lectin domain 23 258 IPR001220 GO:0030246
Cma18g00370 678 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 15 670 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00124 Cma-Chr14:532341 Cma18g00370 Cma-Chr18:2011296 1.66E-162 dispersed
Cma18g00370 Cma-Chr18:2011296 Cma06g00283 Cma-Chr6:1371766 1.64E-42 dispersed
Cma11g01881 Cma-Chr11:12473256 Cma18g00370 Cma-Chr18:2011296 0 wgd
Cma13g00642 Cma-Chr13:6083816 Cma18g00370 Cma-Chr18:2011296 0 wgd
Cma18g00370 Cma-Chr18:2011296 Cma19g00989 Cma-Chr19:8609121 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69283 PF00069 Pkinase 2.40E-48 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00370 - - csv:101222577 1070.84