Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma18g00433 | ATGACATCAGGGAACAGAATGCCGACTTGGAAGGAGAGGGAGAATAACAAGCGCCGTGAGAGGCGCCGCCGTGCCATCGCCGCTAAGATCTTTCTCGGCTTGCGAATGTATGGCAACTACAAGCTTCCCAAGCACTGCGACAATAATGAGGTCCTCAAAGCCCTCTGCAATGAAGCTGGATGGACTGTTGAGGAAGACGGCACTACCTATCGCAAGGGATGCAAGCCTGTGGAACGTGATATCATGGGTGGATCAGCTTCTGCAAGTCCATGTTCATCGTACCAGCCGAGCCCATTTACGTCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACCTCTTCCCGTTACGCCATTGTAGGCAATGGCAATACTGCCGATCCCAATTCCCTCATCCCATGGTTGAAGAACCTCTCCTCAGGTTCATCATCAGCTTCTTCCCGGCTGCCTCATTACAATCATTACATAACTGGTGGCTCTATAAGTGCACCTGTCAGCCCTCCGTCGAGCTCCCCAACTGCTCGAACACCCAGAAAACCAAATGATTGGGACAATCATCCTGCAGCTGCTCCTGCTTGGGCAGCACAGCACTTCTCATGTATGGCGACCCCACCAAGCCCTGGACGTCAGGCATTGCCTGATTCGGCATGGCCTGATAGTATGCGGATTCCTCAAAGTGGACCATCGTCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTTGGATTCAAGGAGGCAATGTCTGCTGGAGGATCTCGTAACTGGACTCCTGCACAGAGTGGGACGTGCTCGCCCACGGTCACTGCAGGCGCCGATCATACTTCAGATGTTCTGATGACCGATGAAAGTGTGGCAGAGTTTGCCTTTGGAAGTTGTTCGGTTGGGTTGGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTTGAACTTACACTTGGGAATTCAAGAACAAGGGTTAATCCAGTTACATCCTCTTAA | 1002 | 51.5 | MTSGNRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPFTSYNPSPASSSFPSPTSSRYAIVGNGNTADPNSLIPWLKNLSSGSSSASSRLPHYNHYITGGSISAPVSPPSSSPTARTPRKPNDWDNHPAAAPAWAAQHFSCMATPPSPGRQALPDSAWPDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVTAGADHTSDVLMTDESVAEFAFGSCSVGLVKPWEGERIHEECISDDLELTLGNSRTRVNPVTSS | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 2401598 | 2404460 | + | CmaCh18G004330.1 | Cma18g00433 | 313771 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma18g00433 | 333 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 326 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
Cma18g00433 | 333 | MobiDBLite | consensus disorder prediction | 162 | 221 | - | - | |
Cma18g00433 | 333 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cma18g00433 | 333 | MobiDBLite | consensus disorder prediction | 85 | 115 | - | - | |
Cma18g00433 | 333 | MobiDBLite | consensus disorder prediction | 250 | 269 | - | - | |
Cma18g00433 | 333 | MobiDBLite | consensus disorder prediction | 86 | 115 | - | - | |
Cma18g00433 | 333 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 4 | 1 | 326 | - | - | |
Cma18g00433 | 333 | MobiDBLite | consensus disorder prediction | 254 | 269 | - | - | |
Cma18g00433 | 333 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 141 | IPR008540 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma13g00580 | Cma18g00433 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma16g00431 | Cma-Chr16:2148810 | Cma18g00433 | Cma-Chr18:2401598 | 1.25E-114 | dispersed | |
Cma18g00433 | Cma-Chr18:2401598 | Cma18g00509 | Cma-Chr18:3050546 | 7.56E-17 | dispersed | |
Cma13g00580 | Cma-Chr13:5806691 | Cma18g00433 | Cma-Chr18:2401598 | 3.98E-160 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
36768 | PF05687 | BES1_N | 1.90E-66 | No_clan | Cma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma18g00433 | - | - | csv:101204637 | 491.886 |