Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00446 ATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGTGCTGAGGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCATTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGAGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGCAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCCAATGAAGCTGCGCAGGCAAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGACGATGCAAAGAAACTCGACAGACATGCGAAGAGCCGGTATACAATAGATCATTGA 714 46.5 MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTIDH 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2462683 2465719 - CmaCh18G004460.1 Cma18g00446 313784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00446 237 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cma18g00446 237 MobiDBLite consensus disorder prediction 1 36 - -
Cma18g00446 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 18 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cma18g00446 237 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cma18g00446 237 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
Cma18g00446 237 SUPERFAMILY eIF4e-like 56 229 IPR023398 -
Cma18g00446 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 18 235 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma13g00570 Cma18g00446 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g01063 Cma-Chr8:6648359 Cma18g00446 Cma-Chr18:2462683 2.32E-75 dispersed
Cma17g00145 Cma-Chr17:719790 Cma18g00446 Cma-Chr18:2462683 2.19E-70 dispersed
Cma14g01112 Cma-Chr14:8228464 Cma18g00446 Cma-Chr18:2462683 1.70E-33 transposed
Cma13g00570 Cma-Chr13:5756713 Cma18g00446 Cma-Chr18:2462683 3.03E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00446 K03259 - csv:101206312 444.121