Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00502 ATGTCTCTTTCTCCCCTTTTCTTCTCTTCCTTTACTTCTTCTTTCAATTTCTCTCCTTGGTCGCCGACGTCTTTTGCTTGCTTCCTCCTATATACTCTCTCTCTCACTTGGATCTGCATTTCATTTCCTGTCTTCGTTTTGGATCTGCATCTTGTTCTTATTTTCACTGATTCACTACAACGGAAGAGCGGGGAGCTAAGCTGGAATTCGATCTTGGCTTGTTCTGAAATGGACAATGCTGATATTGAGAGCGGGGAAGAGGATTTTCATGGGCAGAGGGGAAGGAAATACCGCCCTGTTGAAGCCCATGATCGTGCTGTTCTTGAAATGTCTTCCATGGATCCGGGGCCCGCATCCTCTACGTCTTCCATTACCACGCGGCATCCTTCTATGAAGAAGGTAAAAGTGGGTTCTCAGACAGGCACTGATGGAAAAGAAGGGAACTCTCTTACTCTCGTCGAAATTAATGGCCCCCAGGGAGAATCCAAGTTGGAGTTTTTTGGTTTTGATTCTCTTGTCAATATTCTAGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCACCTTCTAGTCCTCGAGATGGTGAGAATGTTTCGATCTCTCAGGGGTTGCCAAAGAACGAGGAAGTCAAATCGGGAACATTGATGGGTGTATTTATCCCATGCTTACAGAACATATTGGGAATCATTTACTATATTCGATTTTCTTGGATTGTCGGCATGGCAGGGATTGGTGAGTCATTAGTGCTGGTGGCATTTTGTGGTTTATGTACGTTCTTGACTTCAATTTCACTGAGTGCTATTGCAACTAATGGTGCAATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTCGGAAATGCAGTTGCTGGTGCTCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGGATGCTGTACCATCTGCAGGGATATTCAGAGAGACTGTAACAAAAGTTAATGGATCAACGGTTGAACCAATTCAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATCGTGACGATATTTCTGTGCTTCATTGTGTTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTAGTTTGCATATTTCTTGGAATTTTTCTGGCCAAGAAAAACGACCCTGCAGATGGTGTCACAGGGTTGAGTATGGATACTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACTAACAGTGCTGGAATTCCCGATCCTCAGGGAAACGTATATTGGAATTTCAATGCATTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGATCAGCTTCACTGAAGGATACTCAACGTTCAATTCCTATGGGAACATTGTTTGCGACTCTTTTGACAACTATATTGTATCTGGTCTCTGTGCTGTTATTTGGAGCACTGGCAACCAGAAAGAGATTGTTAACAGATAGGCTTTTTACTGCTACAGTCGCGTGGCCTTTCCCAGCAATTATTTATGTTGGAATCATTTTATCAACCCTTGGAGCTGCTCTTCAGAGCTTGACAGGAGCCCCCCGCTTACTAGCAGCCATAGCCAATGATAATATATTACCCATTCTAAACTATTTTCAAGTAGAAGATGGCTGTGAGCCATACTTTGCAACCCTCTTTACTGCAATTCTCTGCATCGGATGTGTCATAATTGGGAATCTTGATCTTATCACACCAACCGTAACCATGTTTTTCCTATTGTGCTACGCTGGCGTGAACTTATCCTGCTTCCTTTTGGATCTACTAGATGCTCCCAGTTGGCGTCCACGATGGAAATTTCATCACTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCATGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTCCGCAGCCTTCGTTCACTTGGAGCGAGCCAAGTTCACCCAAAGAATTGGTATCCCATACCGTTGATATTTTGCCGGCCATGGGGAAAGCTGCCAGAAAATGTTCCTTGTCACCCAAAACTTGCGGACTTTGCAAACTGCATGAAGAAAAAGGGCCGTGGAATGTCCATATTTGTGTCCATACTAGATGGAGATTACCATGAGCGGGTTGAAGATTCCAAAGCTGCCTGCAAGCAGCTTGCTACATATATTGATTACAAACGTTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCTCTATGTCTGAAGGCTTCAGGGGGATTGTTCAGACGATGGGTCTTGGAAATCTCAAGCCTAATATCATAGTTATGCGATATCCAGAAATCTGGCGTCGCGAAAATCTAACCGAGATTCCTGCTACTTTCGTTGGAATAATCAATGACTGCATTGATGCTAACAAGGCTGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATATCAGAGGCAGTATGGAACTATAGACTTGTATTGGATTGTGAGGGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTCACAAAGGAGAGCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATTGCTGAGGAGGATTCTGATGCCGAGGGCCTCAAAGCTGATGTCAAAAAGTTCTTGTATGATCTTCGGATGCAAGCCGAGGTGATCGTTATAACGATCAAATCATGGGACACCACACAAGTGGAGGGTGGGCAACAAGACGAATCAATAGAAGCGTTCACCGCTGGTCAAGGCAGGATTGCTAGTTATTTAGGTGAAATGAAGGCAGCTGCTGCTGAAAGCAGAGCAACCACACTAATGGCTGATGGGAAGCCTGTGAATGTGAATGAGAAACAAGTACAGAAATTTCTAAATACAACTCTCAAGCTGAACTCGAGCATTCTGAGATACTCGAGGATGGCTGCGGTCGTGCTCGTCAGCCTCCCGCCACCTCCGCCCAATCATCCTGCCTACTTCTATATGGAATACTTGGACTTGTTGGTTGAGAATGTGCCAAGGCTATTGATCGTAAGAGGATATCGTAGAGACGTCGTAACGTTGTACACGTAG 3180 44.18 MSLSPLFFSSFTSSFNFSPWSPTSFACFLLYTLSLTWICISFPVFVLDLHLVLIFTDSLQRKSGELSWNSILACSEMDNADIESGEEDFHGQRGRKYRPVEAHDRAVLEMSSMDPGPASSTSSITTRHPSMKKVKVGSQTGTDGKEGNSLTLVEINGPQGESKLEFFGFDSLVNILGLKSMMGEQIQAPSSPRDGENVSISQGLPKNEEVKSGTLMGVFIPCLQNILGIIYYIRFSWIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLDAVPSAGIFRETVTKVNGSTVEPIQSPSSHDLQVYGIIVTIFLCFIVFGGVKMINRVAPAFLIPVLFSVVCIFLGIFLAKKNDPADGVTGLSMDTFKENWSSDYQMTNSAGIPDPQGNVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPMGTLFATLLTTILYLVSVLLFGALATRKRLLTDRLFTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDNILPILNYFQVEDGCEPYFATLFTAILCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDSKAACKQLATYIDYKRCEGVAEIVVAPSMSEGFRGIVQTMGLGNLKPNIIVMRYPEIWRRENLTEIPATFVGIINDCIDANKAVVIVKGLDEWPNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTTQVEGGQQDESIEAFTAGQGRIASYLGEMKAAAAESRATTLMADGKPVNVNEKQVQKFLNTTLKLNSSILRYSRMAAVVLVSLPPPPPNHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLYT 1059
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2970466 2984193 + CmaCh18G005020.1 Cma18g00502 313840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00502 1059 TIGRFAM 2a30: K-Cl cotransporter 154 1059 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cma18g00502 1059 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 88 1058 - -
Cma18g00502 1059 Pfam Solute carrier family 12 726 847 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cma18g00502 1059 Pfam Solute carrier family 12 858 1058 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cma18g00502 1059 MobiDBLite consensus disorder prediction 114 149 - -
Cma18g00502 1059 MobiDBLite consensus disorder prediction 111 149 - -
Cma18g00502 1059 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 88 1058 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cma18g00502 1059 Pfam Amino acid permease 217 692 IPR004841 GO:0016020|GO:0055085
Cma18g00502 1059 Gene3D Amino acid/polyamine transporter I 210 674 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma13g00499 Cma18g00502 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00499 Cma-Chr13:5319522 Cma18g00502 Cma-Chr18:2970466 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00502 K14427 - csv:101216218 1783.07