Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma18g00502 | ATGTCTCTTTCTCCCCTTTTCTTCTCTTCCTTTACTTCTTCTTTCAATTTCTCTCCTTGGTCGCCGACGTCTTTTGCTTGCTTCCTCCTATATACTCTCTCTCTCACTTGGATCTGCATTTCATTTCCTGTCTTCGTTTTGGATCTGCATCTTGTTCTTATTTTCACTGATTCACTACAACGGAAGAGCGGGGAGCTAAGCTGGAATTCGATCTTGGCTTGTTCTGAAATGGACAATGCTGATATTGAGAGCGGGGAAGAGGATTTTCATGGGCAGAGGGGAAGGAAATACCGCCCTGTTGAAGCCCATGATCGTGCTGTTCTTGAAATGTCTTCCATGGATCCGGGGCCCGCATCCTCTACGTCTTCCATTACCACGCGGCATCCTTCTATGAAGAAGGTAAAAGTGGGTTCTCAGACAGGCACTGATGGAAAAGAAGGGAACTCTCTTACTCTCGTCGAAATTAATGGCCCCCAGGGAGAATCCAAGTTGGAGTTTTTTGGTTTTGATTCTCTTGTCAATATTCTAGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCACCTTCTAGTCCTCGAGATGGTGAGAATGTTTCGATCTCTCAGGGGTTGCCAAAGAACGAGGAAGTCAAATCGGGAACATTGATGGGTGTATTTATCCCATGCTTACAGAACATATTGGGAATCATTTACTATATTCGATTTTCTTGGATTGTCGGCATGGCAGGGATTGGTGAGTCATTAGTGCTGGTGGCATTTTGTGGTTTATGTACGTTCTTGACTTCAATTTCACTGAGTGCTATTGCAACTAATGGTGCAATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTCGGAAATGCAGTTGCTGGTGCTCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGGATGCTGTACCATCTGCAGGGATATTCAGAGAGACTGTAACAAAAGTTAATGGATCAACGGTTGAACCAATTCAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATCGTGACGATATTTCTGTGCTTCATTGTGTTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTAGTTTGCATATTTCTTGGAATTTTTCTGGCCAAGAAAAACGACCCTGCAGATGGTGTCACAGGGTTGAGTATGGATACTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACTAACAGTGCTGGAATTCCCGATCCTCAGGGAAACGTATATTGGAATTTCAATGCATTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGATCAGCTTCACTGAAGGATACTCAACGTTCAATTCCTATGGGAACATTGTTTGCGACTCTTTTGACAACTATATTGTATCTGGTCTCTGTGCTGTTATTTGGAGCACTGGCAACCAGAAAGAGATTGTTAACAGATAGGCTTTTTACTGCTACAGTCGCGTGGCCTTTCCCAGCAATTATTTATGTTGGAATCATTTTATCAACCCTTGGAGCTGCTCTTCAGAGCTTGACAGGAGCCCCCCGCTTACTAGCAGCCATAGCCAATGATAATATATTACCCATTCTAAACTATTTTCAAGTAGAAGATGGCTGTGAGCCATACTTTGCAACCCTCTTTACTGCAATTCTCTGCATCGGATGTGTCATAATTGGGAATCTTGATCTTATCACACCAACCGTAACCATGTTTTTCCTATTGTGCTACGCTGGCGTGAACTTATCCTGCTTCCTTTTGGATCTACTAGATGCTCCCAGTTGGCGTCCACGATGGAAATTTCATCACTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCATGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTCCGCAGCCTTCGTTCACTTGGAGCGAGCCAAGTTCACCCAAAGAATTGGTATCCCATACCGTTGATATTTTGCCGGCCATGGGGAAAGCTGCCAGAAAATGTTCCTTGTCACCCAAAACTTGCGGACTTTGCAAACTGCATGAAGAAAAAGGGCCGTGGAATGTCCATATTTGTGTCCATACTAGATGGAGATTACCATGAGCGGGTTGAAGATTCCAAAGCTGCCTGCAAGCAGCTTGCTACATATATTGATTACAAACGTTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCTCTATGTCTGAAGGCTTCAGGGGGATTGTTCAGACGATGGGTCTTGGAAATCTCAAGCCTAATATCATAGTTATGCGATATCCAGAAATCTGGCGTCGCGAAAATCTAACCGAGATTCCTGCTACTTTCGTTGGAATAATCAATGACTGCATTGATGCTAACAAGGCTGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATATCAGAGGCAGTATGGAACTATAGACTTGTATTGGATTGTGAGGGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTCACAAAGGAGAGCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATTGCTGAGGAGGATTCTGATGCCGAGGGCCTCAAAGCTGATGTCAAAAAGTTCTTGTATGATCTTCGGATGCAAGCCGAGGTGATCGTTATAACGATCAAATCATGGGACACCACACAAGTGGAGGGTGGGCAACAAGACGAATCAATAGAAGCGTTCACCGCTGGTCAAGGCAGGATTGCTAGTTATTTAGGTGAAATGAAGGCAGCTGCTGCTGAAAGCAGAGCAACCACACTAATGGCTGATGGGAAGCCTGTGAATGTGAATGAGAAACAAGTACAGAAATTTCTAAATACAACTCTCAAGCTGAACTCGAGCATTCTGAGATACTCGAGGATGGCTGCGGTCGTGCTCGTCAGCCTCCCGCCACCTCCGCCCAATCATCCTGCCTACTTCTATATGGAATACTTGGACTTGTTGGTTGAGAATGTGCCAAGGCTATTGATCGTAAGAGGATATCGTAGAGACGTCGTAACGTTGTACACGTAG | 3180 | 44.18 | MSLSPLFFSSFTSSFNFSPWSPTSFACFLLYTLSLTWICISFPVFVLDLHLVLIFTDSLQRKSGELSWNSILACSEMDNADIESGEEDFHGQRGRKYRPVEAHDRAVLEMSSMDPGPASSTSSITTRHPSMKKVKVGSQTGTDGKEGNSLTLVEINGPQGESKLEFFGFDSLVNILGLKSMMGEQIQAPSSPRDGENVSISQGLPKNEEVKSGTLMGVFIPCLQNILGIIYYIRFSWIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLDAVPSAGIFRETVTKVNGSTVEPIQSPSSHDLQVYGIIVTIFLCFIVFGGVKMINRVAPAFLIPVLFSVVCIFLGIFLAKKNDPADGVTGLSMDTFKENWSSDYQMTNSAGIPDPQGNVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPMGTLFATLLTTILYLVSVLLFGALATRKRLLTDRLFTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDNILPILNYFQVEDGCEPYFATLFTAILCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDSKAACKQLATYIDYKRCEGVAEIVVAPSMSEGFRGIVQTMGLGNLKPNIIVMRYPEIWRRENLTEIPATFVGIINDCIDANKAVVIVKGLDEWPNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTTQVEGGQQDESIEAFTAGQGRIASYLGEMKAAAAESRATTLMADGKPVNVNEKQVQKFLNTTLKLNSSILRYSRMAAVVLVSLPPPPPNHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLYT | 1059 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 2970466 | 2984193 | + | CmaCh18G005020.1 | Cma18g00502 | 313840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma18g00502 | 1059 | TIGRFAM | 2a30: K-Cl cotransporter | 154 | 1059 | IPR004842 | GO:0006811|GO:0015377|GO:0016021 | |
Cma18g00502 | 1059 | PANTHER | CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 | 88 | 1058 | - | - | |
Cma18g00502 | 1059 | Pfam | Solute carrier family 12 | 726 | 847 | IPR018491 | GO:0006811|GO:0016020|GO:0022857 | |
Cma18g00502 | 1059 | Pfam | Solute carrier family 12 | 858 | 1058 | IPR018491 | GO:0006811|GO:0016020|GO:0022857 | |
Cma18g00502 | 1059 | MobiDBLite | consensus disorder prediction | 114 | 149 | - | - | |
Cma18g00502 | 1059 | MobiDBLite | consensus disorder prediction | 111 | 149 | - | - | |
Cma18g00502 | 1059 | PANTHER | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS | 88 | 1058 | IPR004842 | GO:0006811|GO:0015377|GO:0016021 | |
Cma18g00502 | 1059 | Pfam | Amino acid permease | 217 | 692 | IPR004841 | GO:0016020|GO:0055085 | |
Cma18g00502 | 1059 | Gene3D | Amino acid/polyamine transporter I | 210 | 674 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma13g00499 | Cma18g00502 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma13g00499 | Cma-Chr13:5319522 | Cma18g00502 | Cma-Chr18:2970466 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma18g00502 | K14427 | - | csv:101216218 | 1783.07 |