Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00570 ATGATGGAGTTTCGTTCAACACTTAGTGGTTTGATAGCAAGTTTAGTTCTTGTTTATTGCTTTGCAGAAGAGAGGCAAATATACTTAGTTTTAATGGAAGAAAGCTCAAACGAAGACCATCTTCTTCAAAACACACTAAAAAGCTACACAAAGCTTCAAAGCTTCAAGCACATAATGAATGGCTTTGCAGTGCACACAACGCCATCAGAGGCCGCCAAGCTAAGACAAGCCAATGGAGTGAAATTAGTGGAGAGAGATAGAGGAGTGAGGAAGATGACAACTTACACCCCTAAGTTTCTAGGGGTGCCCTCCAAATCAAGGTTATGTTCCAAGAAGACTAAAACTAGCCCTGATGGGGAAGGGATTGTTATTGGGTTTGTGGACTCTGGGATTGACCCAACACACCCAAGCTTTGGTTTTGATGATGGTTATGAAGATTTAAGGCTGTTTTGTGAAAAGGGTCGGTTTTTTCCATTGAGTTCGTGCAATGGGAAGATAGTTGGGGCTAGGTTTTTCTCGGCGGGGGCTCGAGCTGTTGCGAAGCTTAATTCTTCTGTTGATTTTCTCTCGCCGTTTGATGTAGAAGGCCATGGGAGCCATGTCGCTTCCATAGCTGCCGGGAATGGTGGAGTTCCTGTTTATGTTAATGGTTTTTTCTATGGATTCGCCAGTGGGATGGCACCACGAGCAAGAATTGCTGTCTATAAGGCCGTTTATCCAACCATGTCCACTCTAACCGATGTTGTTTCAGCAATAGATCAAGCAGTGATCGATGGAGTTGATATATTGGCATTATCAGTCGGACCAAATGAACCACCGGAGGAAGGACTTACCTTCCTAAGCATATACGACATTGCCATATTATCTGCTACACGAGCTGGGATCCTTGTGGTTCAGGCAGTTGGAAACAACGGCCCAGCCTCGGCGACCGTCGTCTCCTACAGCCCGTGGGCAGTCGGCGTTGCAGCTTCGGGCACTGACAGAGTTTATCCGGCCTCACTTCTTCTTGGGAATGGCCAGAAAGTTGGAGGAGTAGGATTATCTGGTGGGTCTATACATTTTTGTGGCTATATTTTTTGGGATCTCTATTATAGTTCTCAAAGCAATTTTCTTAACAAAGGCTTTCCCCTATATTCTAAGCATCTATCATCTTCCTCAGGACCCACTTTTTTTCTACATAAACTTGTATTAGCCAAGGATGCAATGAAACAAAATGGGACAATTCCCAGTGAAGAGTGCCAATATCCTGAAGCTTTTGACCCAAATCTTGTCCAAAACAGCATAGTCCTCTGCTCTTTCTCTCAAGGATTCCTCAATGGCACCTCCTCCCTCGCAGCCATCATCCACACTGCAATGACACTCCGATTCATCGGCTTCGCTCTCATTGCAAATCCCAACTATGGCGATTTCATCGCCGAGCCCATCACTTTCAGACTTCCTGGCATTCTTATCCCGAACGCATCAGATTCTCAGGCGATACTAAACTACTACGAAGCAAATACATGCAAGGATGCCAATGGAATGGTCAGTGAATTTAAAGGGAAAGCAGCCATAGGAGAAGGAAGAGTTGCTTCATTTGGAAGCCAAGCACCAACAGTTAGCAGATTTTCATCCAGAGGACCAGATTATATGAACATGAACAGGACAGTAGCTGATGTGCTAAAGCCAGATATTCTTGCACCTGGCCACCAAATTTGGGCTGCTTGGAGCCCTCTCAGTGTTACAGAGCCACTTTTGAAGGGTTACCAATTTGCACTGATGTCTGGGACAAGTATGGCAGCACCTCATATAGTGGGAATAGCAGCACTTATTAAGCAAAAGAATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCAACAACTGCCACAAAGTATGATATGAATGGAGACCTTATTCAGGCTGAGGGATTCGACATTCATCGTTTATATCCTTCTACTCCCTTTGATTTGGGCGCTGGCCTCGTCAAACCGACCAATGCTTTGGACCCAGGACTGGTCTTCCCAGCAGAATATGAAGACTACATAAACTTCTTGTGCTCATTACCTGGGGATCCTGCTGTCATAAAAAATACCACTGGAGGACAGTGCAACGCCTCTGTCCCACAGCCACACCCGGCAGATCTGAACCTTCCTTCAGTCACAATATCGTCACTGGTTGGGCATCAGGTGCTGCACAGAAGAGTGAAGAATGTAGGAACCAAAGTGGAGACATACGTGTGGTCAGTGATCCCACCAAATGGGACAACAATCAACATCAATCCACCATGGTTCACCATAGCACCAGGAGGACTCCAAAACTTGGAAATACAGATCAAAGTTACACACAAAATGAATCACTTTACCTTTGGGGAGATTCTTTTCACAGGAAGTTTAAATCATATTGGAAGGATCCCTTTGTCAGTTTTGGCTGTTTCTGTATCCTAA 2430 45.02 MMEFRSTLSGLIASLVLVYCFAEERQIYLVLMEESSNEDHLLQNTLKSYTKLQSFKHIMNGFAVHTTPSEAAKLRQANGVKLVERDRGVRKMTTYTPKFLGVPSKSRLCSKKTKTSPDGEGIVIGFVDSGIDPTHPSFGFDDGYEDLRLFCEKGRFFPLSSCNGKIVGARFFSAGARAVAKLNSSVDFLSPFDVEGHGSHVASIAAGNGGVPVYVNGFFYGFASGMAPRARIAVYKAVYPTMSTLTDVVSAIDQAVIDGVDILALSVGPNEPPEEGLTFLSIYDIAILSATRAGILVVQAVGNNGPASATVVSYSPWAVGVAASGTDRVYPASLLLGNGQKVGGVGLSGGSIHFCGYIFWDLYYSSQSNFLNKGFPLYSKHLSSSSGPTFFLHKLVLAKDAMKQNGTIPSEECQYPEAFDPNLVQNSIVLCSFSQGFLNGTSSLAAIIHTAMTLRFIGFALIANPNYGDFIAEPITFRLPGILIPNASDSQAILNYYEANTCKDANGMVSEFKGKAAIGEGRVASFGSQAPTVSRFSSRGPDYMNMNRTVADVLKPDILAPGHQIWAAWSPLSVTEPLLKGYQFALMSGTSMAAPHIVGIAALIKQKNPSWTPSMIASAMSTTATKYDMNGDLIQAEGFDIHRLYPSTPFDLGAGLVKPTNALDPGLVFPAEYEDYINFLCSLPGDPAVIKNTTGGQCNASVPQPHPADLNLPSVTISSLVGHQVLHRRVKNVGTKVETYVWSVIPPNGTTININPPWFTIAPGGLQNLEIQIKVTHKMNHFTFGEILFTGSLNHIGRIPLSVLAVSVS 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3838893 3844034 - CmaCh18G005700.1 Cma18g00570 313908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00570 809 Gene3D - 680 806 - -
Cma18g00570 809 Gene3D - 392 526 - -
Cma18g00570 809 ProSiteProfiles Serine proteases, subtilase domain profile. 97 663 - -
Cma18g00570 809 Pfam Fibronectin type-III domain 709 803 IPR041469 -
Cma18g00570 809 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 804 IPR045051 -
Cma18g00570 809 Gene3D Peptidase S8/S53 domain 527 676 IPR036852 GO:0004252|GO:0006508
Cma18g00570 809 Gene3D Peptidase S8/S53 domain 93 347 IPR036852 GO:0004252|GO:0006508
Cma18g00570 809 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
Cma18g00570 809 Pfam Subtilase family 119 628 IPR000209 GO:0006508|GO:0008236
Cma18g00570 809 SUPERFAMILY Subtilisin-like 92 667 IPR036852 GO:0004252|GO:0006508
Cma18g00570 809 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 90 IPR037045 -
Cma18g00570 809 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 35 804 - -
Cma18g00570 809 Pfam Peptidase inhibitor I9 41 90 IPR010259 -
Cma18g00570 809 PRINTS Subtilisin serine protease family (S8) signature 119 138 IPR015500 -
Cma18g00570 809 PRINTS Subtilisin serine protease family (S8) signature 588 604 IPR015500 -
Cma18g00570 809 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 124 135 IPR023827 -
Cma18g00570 809 CDD PA_subtilisin_like 410 501 - -
Cma18g00570 809 ProSitePatterns Serine proteases, subtilase family, serine active site. 589 599 IPR023828 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma07g00037 Cma18g00570 CCT
Cma03g01472 Cma18g00570 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00570 Cma-Chr18:3838893 Cma08g00827 Cma-Chr8:5012638 2.05E-85 dispersed
Cma18g00570 Cma-Chr18:3838893 Cma12g00908 Cma-Chr12:6963550 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00570 - - mcha:111012715 1172.53