Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma18g00570 | ATGATGGAGTTTCGTTCAACACTTAGTGGTTTGATAGCAAGTTTAGTTCTTGTTTATTGCTTTGCAGAAGAGAGGCAAATATACTTAGTTTTAATGGAAGAAAGCTCAAACGAAGACCATCTTCTTCAAAACACACTAAAAAGCTACACAAAGCTTCAAAGCTTCAAGCACATAATGAATGGCTTTGCAGTGCACACAACGCCATCAGAGGCCGCCAAGCTAAGACAAGCCAATGGAGTGAAATTAGTGGAGAGAGATAGAGGAGTGAGGAAGATGACAACTTACACCCCTAAGTTTCTAGGGGTGCCCTCCAAATCAAGGTTATGTTCCAAGAAGACTAAAACTAGCCCTGATGGGGAAGGGATTGTTATTGGGTTTGTGGACTCTGGGATTGACCCAACACACCCAAGCTTTGGTTTTGATGATGGTTATGAAGATTTAAGGCTGTTTTGTGAAAAGGGTCGGTTTTTTCCATTGAGTTCGTGCAATGGGAAGATAGTTGGGGCTAGGTTTTTCTCGGCGGGGGCTCGAGCTGTTGCGAAGCTTAATTCTTCTGTTGATTTTCTCTCGCCGTTTGATGTAGAAGGCCATGGGAGCCATGTCGCTTCCATAGCTGCCGGGAATGGTGGAGTTCCTGTTTATGTTAATGGTTTTTTCTATGGATTCGCCAGTGGGATGGCACCACGAGCAAGAATTGCTGTCTATAAGGCCGTTTATCCAACCATGTCCACTCTAACCGATGTTGTTTCAGCAATAGATCAAGCAGTGATCGATGGAGTTGATATATTGGCATTATCAGTCGGACCAAATGAACCACCGGAGGAAGGACTTACCTTCCTAAGCATATACGACATTGCCATATTATCTGCTACACGAGCTGGGATCCTTGTGGTTCAGGCAGTTGGAAACAACGGCCCAGCCTCGGCGACCGTCGTCTCCTACAGCCCGTGGGCAGTCGGCGTTGCAGCTTCGGGCACTGACAGAGTTTATCCGGCCTCACTTCTTCTTGGGAATGGCCAGAAAGTTGGAGGAGTAGGATTATCTGGTGGGTCTATACATTTTTGTGGCTATATTTTTTGGGATCTCTATTATAGTTCTCAAAGCAATTTTCTTAACAAAGGCTTTCCCCTATATTCTAAGCATCTATCATCTTCCTCAGGACCCACTTTTTTTCTACATAAACTTGTATTAGCCAAGGATGCAATGAAACAAAATGGGACAATTCCCAGTGAAGAGTGCCAATATCCTGAAGCTTTTGACCCAAATCTTGTCCAAAACAGCATAGTCCTCTGCTCTTTCTCTCAAGGATTCCTCAATGGCACCTCCTCCCTCGCAGCCATCATCCACACTGCAATGACACTCCGATTCATCGGCTTCGCTCTCATTGCAAATCCCAACTATGGCGATTTCATCGCCGAGCCCATCACTTTCAGACTTCCTGGCATTCTTATCCCGAACGCATCAGATTCTCAGGCGATACTAAACTACTACGAAGCAAATACATGCAAGGATGCCAATGGAATGGTCAGTGAATTTAAAGGGAAAGCAGCCATAGGAGAAGGAAGAGTTGCTTCATTTGGAAGCCAAGCACCAACAGTTAGCAGATTTTCATCCAGAGGACCAGATTATATGAACATGAACAGGACAGTAGCTGATGTGCTAAAGCCAGATATTCTTGCACCTGGCCACCAAATTTGGGCTGCTTGGAGCCCTCTCAGTGTTACAGAGCCACTTTTGAAGGGTTACCAATTTGCACTGATGTCTGGGACAAGTATGGCAGCACCTCATATAGTGGGAATAGCAGCACTTATTAAGCAAAAGAATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCAACAACTGCCACAAAGTATGATATGAATGGAGACCTTATTCAGGCTGAGGGATTCGACATTCATCGTTTATATCCTTCTACTCCCTTTGATTTGGGCGCTGGCCTCGTCAAACCGACCAATGCTTTGGACCCAGGACTGGTCTTCCCAGCAGAATATGAAGACTACATAAACTTCTTGTGCTCATTACCTGGGGATCCTGCTGTCATAAAAAATACCACTGGAGGACAGTGCAACGCCTCTGTCCCACAGCCACACCCGGCAGATCTGAACCTTCCTTCAGTCACAATATCGTCACTGGTTGGGCATCAGGTGCTGCACAGAAGAGTGAAGAATGTAGGAACCAAAGTGGAGACATACGTGTGGTCAGTGATCCCACCAAATGGGACAACAATCAACATCAATCCACCATGGTTCACCATAGCACCAGGAGGACTCCAAAACTTGGAAATACAGATCAAAGTTACACACAAAATGAATCACTTTACCTTTGGGGAGATTCTTTTCACAGGAAGTTTAAATCATATTGGAAGGATCCCTTTGTCAGTTTTGGCTGTTTCTGTATCCTAA | 2430 | 45.02 | MMEFRSTLSGLIASLVLVYCFAEERQIYLVLMEESSNEDHLLQNTLKSYTKLQSFKHIMNGFAVHTTPSEAAKLRQANGVKLVERDRGVRKMTTYTPKFLGVPSKSRLCSKKTKTSPDGEGIVIGFVDSGIDPTHPSFGFDDGYEDLRLFCEKGRFFPLSSCNGKIVGARFFSAGARAVAKLNSSVDFLSPFDVEGHGSHVASIAAGNGGVPVYVNGFFYGFASGMAPRARIAVYKAVYPTMSTLTDVVSAIDQAVIDGVDILALSVGPNEPPEEGLTFLSIYDIAILSATRAGILVVQAVGNNGPASATVVSYSPWAVGVAASGTDRVYPASLLLGNGQKVGGVGLSGGSIHFCGYIFWDLYYSSQSNFLNKGFPLYSKHLSSSSGPTFFLHKLVLAKDAMKQNGTIPSEECQYPEAFDPNLVQNSIVLCSFSQGFLNGTSSLAAIIHTAMTLRFIGFALIANPNYGDFIAEPITFRLPGILIPNASDSQAILNYYEANTCKDANGMVSEFKGKAAIGEGRVASFGSQAPTVSRFSSRGPDYMNMNRTVADVLKPDILAPGHQIWAAWSPLSVTEPLLKGYQFALMSGTSMAAPHIVGIAALIKQKNPSWTPSMIASAMSTTATKYDMNGDLIQAEGFDIHRLYPSTPFDLGAGLVKPTNALDPGLVFPAEYEDYINFLCSLPGDPAVIKNTTGGQCNASVPQPHPADLNLPSVTISSLVGHQVLHRRVKNVGTKVETYVWSVIPPNGTTININPPWFTIAPGGLQNLEIQIKVTHKMNHFTFGEILFTGSLNHIGRIPLSVLAVSVS | 809 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 3838893 | 3844034 | - | CmaCh18G005700.1 | Cma18g00570 | 313908 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma18g00570 | 809 | Gene3D | - | 680 | 806 | - | - | |
Cma18g00570 | 809 | Gene3D | - | 392 | 526 | - | - | |
Cma18g00570 | 809 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 97 | 663 | - | - | |
Cma18g00570 | 809 | Pfam | Fibronectin type-III domain | 709 | 803 | IPR041469 | - | |
Cma18g00570 | 809 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 35 | 804 | IPR045051 | - | |
Cma18g00570 | 809 | Gene3D | Peptidase S8/S53 domain | 527 | 676 | IPR036852 | GO:0004252|GO:0006508 | |
Cma18g00570 | 809 | Gene3D | Peptidase S8/S53 domain | 93 | 347 | IPR036852 | GO:0004252|GO:0006508 | |
Cma18g00570 | 809 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 197 | 207 | IPR022398 | - | |
Cma18g00570 | 809 | Pfam | Subtilase family | 119 | 628 | IPR000209 | GO:0006508|GO:0008236 | |
Cma18g00570 | 809 | SUPERFAMILY | Subtilisin-like | 92 | 667 | IPR036852 | GO:0004252|GO:0006508 | |
Cma18g00570 | 809 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 20 | 90 | IPR037045 | - | |
Cma18g00570 | 809 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT2.6 | 35 | 804 | - | - | |
Cma18g00570 | 809 | Pfam | Peptidase inhibitor I9 | 41 | 90 | IPR010259 | - | |
Cma18g00570 | 809 | PRINTS | Subtilisin serine protease family (S8) signature | 119 | 138 | IPR015500 | - | |
Cma18g00570 | 809 | PRINTS | Subtilisin serine protease family (S8) signature | 588 | 604 | IPR015500 | - | |
Cma18g00570 | 809 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 124 | 135 | IPR023827 | - | |
Cma18g00570 | 809 | CDD | PA_subtilisin_like | 410 | 501 | - | - | |
Cma18g00570 | 809 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 589 | 599 | IPR023828 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma07g00037 | Cma18g00570 | CCT | |
Cma03g01472 | Cma18g00570 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma18g00570 | Cma-Chr18:3838893 | Cma08g00827 | Cma-Chr8:5012638 | 2.05E-85 | dispersed | |
Cma18g00570 | Cma-Chr18:3838893 | Cma12g00908 | Cma-Chr12:6963550 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma18g00570 | - | - | mcha:111012715 | 1172.53 |