Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma18g00648 | ATGCATGCCAATGCAATTCATTGCATAACAATGTCAACAAAGGGCATTGCCTTAGGCCTCATACTGTTCTTCAGCTTCGCATCGCTTAGCTTTGGAGCTCTTCAAGTGGGGTTTTACAAAGGAAAATGTGGGTTTAGAGATGTTGAATCCATTGTTGCCGGCGTTGTTGCCGACGCTGTTGAAAATGATGGCACTCTTGTTGCTGCTCTTCTTCGCTTGCAGTTTCATGATTGCTTTGTGTCTGGATGCGACGCTTCCCTACTCCTCGATGGGAGCGATACCGAGAAGCTTGCTCCGCCGAATTTGAGCGTTAGAGGGTATGATTTGATTGATGATGTTAAGATTTTTGTGGAGAGCGTTTGTCCTGGCGTTGTCTCGTGTGCTGATATTATAGCTATGGCTACAAGAGATGCAGTTCATTTGGCTGGAGGAGCACGATACCGTGTTGAAACTGGACGGAGAGACGGGTTCAAACCGGCGAAAAATGTGGATCTTCCGGGACCTTCAATATCAGTTCCAGACTCCATTGAAGCCTTCTCTAGAAGGAACCTTACTGCTACAGATATGGTTTATCTTCTTGGCGGCCATACTGTTGGTGTATCACAATGCTTATTCTTCAAGGATCGCCTCTATAACTACAAGAACACAGGGAGACCCGACCCGACCATCGATCGGTGGTTTCTCAACGACCTAAGAGACCAATGTCCTGAAGATTCTAACGTCGACAACGTCGTATTTCTCGACCAAACCAGTATGAGTTCTTTCGTGGTTGACAAGTCATTTCACAAGCAAATATGGCAACGAAGAGGCATACTGGAAATCGATCAACAACTTGCTTTGCATCCGTTAACGAAGGATTTGGTGACGAGGGTGGCGTTCGGATTCGACTTCGCTTCCAAATTTGGAGATGCCATGATCAAGATGGGAAGATTTGGAGTTCTCACTGGGTCTGATGGGGAGATTAGAAGAACATGTGAGGCTGTTAATTCAGCATGGTGA | 999 | 46.15 | MHANAIHCITMSTKGIALGLILFFSFASLSFGALQVGFYKGKCGFRDVESIVAGVVADAVENDGTLVAALLRLQFHDCFVSGCDASLLLDGSDTEKLAPPNLSVRGYDLIDDVKIFVESVCPGVVSCADIIAMATRDAVHLAGGARYRVETGRRDGFKPAKNVDLPGPSISVPDSIEAFSRRNLTATDMVYLLGGHTVGVSQCLFFKDRLYNYKNTGRPDPTIDRWFLNDLRDQCPEDSNVDNVVFLDQTSMSSFVVDKSFHKQIWQRRGILEIDQQLALHPLTKDLVTRVAFGFDFASKFGDAMIKMGRFGVLTGSDGEIRRTCEAVNSAW | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 5907554 | 5910328 | + | CmaCh18G006480.1 | Cma18g00648 | 313986 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma18g00648 | 332 | Pfam | Peroxidase | 54 | 292 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PANTHER | PEROXIDASE | 22 | 327 | - | - | |
Cma18g00648 | 332 | SUPERFAMILY | Heme-dependent peroxidases | 34 | 329 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | Gene3D | - | 38 | 329 | - | - | |
Cma18g00648 | 332 | PANTHER | PEROXIDASE 25-RELATED | 22 | 327 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | CDD | secretory_peroxidase | 34 | 328 | IPR033905 | GO:0004601|GO:0042744 | |
Cma18g00648 | 332 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 188 | 198 | IPR019793 | - | |
Cma18g00648 | 332 | ProSiteProfiles | Plant heme peroxidase family profile. | 33 | 329 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | ProSitePatterns | Peroxidases active site signature. | 67 | 78 | IPR019794 | GO:0004601 | |
Cma18g00648 | 332 | Gene3D | Peroxidase, domain 2 | 166 | 309 | - | - | |
Cma18g00648 | 332 | PRINTS | Plant peroxidase signature | 105 | 118 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Plant peroxidase signature | 187 | 199 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Plant peroxidase signature | 143 | 158 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Plant peroxidase signature | 45 | 64 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Plant peroxidase signature | 69 | 89 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Plant peroxidase signature | 124 | 134 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Plant peroxidase signature | 303 | 316 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Plant peroxidase signature | 264 | 281 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Haem peroxidase superfamily signature | 143 | 155 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Haem peroxidase superfamily signature | 67 | 81 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Haem peroxidase superfamily signature | 125 | 142 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g00648 | 332 | PRINTS | Haem peroxidase superfamily signature | 188 | 203 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma08g00188 | Cma-Chr8:1059496 | Cma18g00648 | Cma-Chr18:5907554 | 4.27E-72 | dispersed | |
Cma18g00648 | Cma-Chr18:5907554 | Cma19g00264 | Cma-Chr19:1878536 | 1.61E-81 | dispersed | |
Cma18g00648 | Cma-Chr18:5907554 | Cma11g01837 | Cma-Chr11:12261525 | 3.38E-74 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma18g00648 | K00430 | - | csv:101210173 | 460.299 |