Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00686 ATGAGTGGCATGAATCAACAACATCCCACCAAAAAAAGGCTCATGCCAATCTCACCCTCAGTAGCTCTACAAATTTCTCATCCACAAAGCATGATACAAGCTTTCTCAGCTCCTCCTTTAAGAAGAGGGAGACGCTCATCGATGTCTGCAGCAAACAACAACTCCACCATGGCTACTTGCATTCGGGATTCGGCAGAAGACGAGGAACACATTTTCCGTAGCCAACTTCCCGAGGTCCAAGTGCCTGATGATATCACATTGCCGGAGTTTGTACTTCAGAATGCTGAATTATATGCTGATAATGTGGCATTTGTGGAAGCTGTGAGTGGAAAGGCATACACTTATCGTGAAGTTGTGAGAGACACGAGTAGGTTCGCTAAGGCCTTGAGCTCTCTGAGGTTGAAGAAGGGGCAGATCGTTATTGTCGTTCTACCCAACGTTGCTGAATATGCCATTGTTGCTTTAGGGATAATGGCTGCTGGAGGCGTGTTTTCTGGTGTGAATCCAGCAGCTCACATATCCGAAATCAAAAAGCAGGTGGAGGTAGCAGACGCTAAACTCGTCGTTACAAACAGCTCAAGCTTTGAAAAGGTAAAGGAATTAAAGCTTCCAGTGATCGTAGTAGGGGAGGAACTGATTGAAGGTTCCATGAACTGGCACAAACTGCTCGAAGCCGCGGACCGAGCAGGCAACAATTTCGTCAAAGAAGATATCAAGCAGACTGATTTATGTGCCCTTCCTTTCTCATCAGGCACTACAGGAGTTTCCAAAGGTGTAATGCTAACTCATCGAAATCTAGTGGCGAACTTGTGTTCTACGCTCTCCGGCATACCACAAGAAATGGTGGGCAAGGTCACGACGTTAGGCCTCATTCCGTTCTTCCACATTTACGGGATTACCGGAATATGTTGTGCCACACTTCGAAACAAGGGAAAAGTTGTGGTGATGGGAAGATTTGATCTTAGAACCTTCATCAATGCCCTGATAACACAGGAGGTCACATTTGCTCCAATTGTTCCTCCTATCATCTTGGCCTTGGTTAAGAATCCTATTGTGAAGGAATTCGATCTAAGCAGTCTCAAACTTCAGGCTATCATGACTGCAGCTGCTCCCCTCGCACCGGAACTTCAAACGTCCTTCGAGAAGAAGTTCCCGGGCGTGGATGTTCAAGAGGCATATGGGCTAACCGAGCACAGCTGCATCACTCTCAACTATGGAAACATAGGCAAAGACAATCTCGCTGCAAAGAAAAACACGGTTGGTCGCATTCTTCCTAATCTAGAAGTCAAATTCATCGACCCCGACAGCGGTAGGTCTCTGCCGAAGAACACGCCTGGGGAAATCTGTGTAAGAAGCCAGTGTGTGATGCAAGGCTACTACAATAATGAAGAGGAGACTTCAAGGACCATCGACAACAAAGGCTGGATGCACACGGGCGACATCGGATACATTGACGACGATGGCGATGTGTTTATTGTGGATCGTATTAAAGAGTTGATTAAGTACAAAGGCTTTCAAGTTGCTCCAGCCGAGTTAGAGGCAATCCTCCTTACTCATCCCTCGATTGAAGATGCAGCCGTAGTTCCGCTGCCAGACAAAGAAGCCGGTGAGATCCCAGCAGCAAGTATTGTAATGGCTCCAAATGCAAAAGAAACCGAAGACGAAATAATCAAATACGTCGCCTCAAACGTTGCACATTACAAGAAAGTTAGGCTCGTTCATTTTGTCGAAACGATCCCAAAATCGCCATCTGGGAAAGTCATGAGGAGGTTGATCAAAGAGAAGATGATCGAAAAGATTCGAGCCGAGACGGCCTCTTGA 1821 46.51 MSGMNQQHPTKKRLMPISPSVALQISHPQSMIQAFSAPPLRRGRRSSMSAANNNSTMATCIRDSAEDEEHIFRSQLPEVQVPDDITLPEFVLQNAELYADNVAFVEAVSGKAYTYREVVRDTSRFAKALSSLRLKKGQIVIVVLPNVAEYAIVALGIMAAGGVFSGVNPAAHISEIKKQVEVADAKLVVTNSSSFEKVKELKLPVIVVGEELIEGSMNWHKLLEAADRAGNNFVKEDIKQTDLCALPFSSGTTGVSKGVMLTHRNLVANLCSTLSGIPQEMVGKVTTLGLIPFFHIYGITGICCATLRNKGKVVVMGRFDLRTFINALITQEVTFAPIVPPIILALVKNPIVKEFDLSSLKLQAIMTAAAPLAPELQTSFEKKFPGVDVQEAYGLTEHSCITLNYGNIGKDNLAAKKNTVGRILPNLEVKFIDPDSGRSLPKNTPGEICVRSQCVMQGYYNNEEETSRTIDNKGWMHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLTHPSIEDAAVVPLPDKEAGEIPAASIVMAPNAKETEDEIIKYVASNVAHYKKVRLVHFVETIPKSPSGKVMRRLIKEKMIEKIRAETAS 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6317824 6320501 + CmaCh18G006860.1 Cma18g00686 314024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00686 606 SUPERFAMILY Acetyl-CoA synthetase-like 65 599 - -
Cma18g00686 606 Gene3D - 69 497 IPR042099 -
Cma18g00686 606 CDD 4CL 81 590 - -
Cma18g00686 606 Pfam AMP-binding enzyme C-terminal domain 511 586 IPR025110 -
Cma18g00686 606 Pfam AMP-binding enzyme 93 502 IPR000873 -
Cma18g00686 606 Gene3D - 498 600 IPR045851 -
Cma18g00686 606 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 63 599 - -
Cma18g00686 606 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 63 599 - -
Cma18g00686 606 ProSitePatterns Putative AMP-binding domain signature. 246 257 IPR020845 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00686 Cma-Chr18:6317824 Cma08g00571 Cma-Chr8:3258050 2.16E-140 dispersed
Cma18g00686 Cma-Chr18:6317824 Cma11g00400 Cma-Chr11:1971997 1.86E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00686 K01904 - csv:101220731 1007.28