Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00699 ATGAAGCTTCTTATTCTTGCCACCCTCACAATAAGCTCACTCCTCTTCCCTTTCACCTTCCTCAATTTCCTCTTTTGCTCTCTCCTCGCCCTCTCTCTCAACTTCTGGCTCATCCCCGGTGGGTTTGCATGGCGCAACCACCACCGCTCCTCAGCCAACCTTCCCGGCCCCTCTGGCTGGCCGTTACTCGGAACGCTCCCGCAAATGGGGCCACTTGCTCACCGAAATCTCGCTGCCATTGCACACTCCTTCAAAGCCACTCGTCTCATGTCCTTCAGCTTGGGTACGACTAGAGCCATCATAAGTAGTCACCCTGACACGGCCAAGCAGATCCTCTGTGGCTCAGCTTTCTCCGACCGCCCCATCAAGCAATCAGCTCGACTAATGATGTTCGAGCGAGCCATTGGTTTCGCTCCCAATGGAGTCTATTGGCGTAATCTTCGACGAATCGCTGCAAACCACATGTTTTCTCCACGAAGAATCTCCGACCTGGAAGGGCTCAGAAGAGAGGTTGGCGTTGAAATGACAGAGGAGATGTCAAGAAATATGACCATTGACGGGGTAGTGAGGCTAAGAGAAGTCCTCCAAAAGCATACGTTGAAGAACATAATAGAGAGCGTGTTTGGAAGTGATTTTAAAACGGTACGAAAGAATCAACTGAGTGAAATGGTGAGAGAAGGCTATGAATTGATAGCTATGTTCAATTGGGAAGATCATTTTCCGGTCAGTTTCTTGGATTTTGGTGGAGTGAAAAGGAAGTGCCATGAATTGGCGGGCAGGGTTAGTGTAGCAGTCGGGCAGATTGTTGAAGAGAGAAAAAGAGACAAAAATGAGGCGAAAAATGACTTTCTTAGTGCTTTGCTTACTTTACCAAAGGAGGATCAGCTGAATGATTCAGACATGGTGGCTGTTCTATGGGAAATGATATTTCGTGGAACCGATACGATTGCCATACTCTTAGAATGGATCATGGGCAGGATGATATTACACCCAGAAATCCAAGCCAAAGCTCGAGAGGAGATCGACACGTGTGTAGGTTGCAATAGGCACGTGCGTGATTCCGACATTCCCAACCTTCCTTACCTCCAAGCCATAGTAAAGGAAGTTCTCCGTTTACACCCTCCAGGTCCATTACTGTCGTGGGCCCGTTTGGCAATCCATGATGTCCACGTGGACAAGGTCTTAATCCCAGCTGGCACCACGGCAATGGTGAACATGTGGGCCATATCTCATGACCCTTCCATATGGAAAGACCCATGGACATTCCGACCAGAGCGGTTCATTGAAGACGACATGTCGATTATGGGTTCGGATTTGAGGCTGGCGCCGTTCGGGGCTGGGCGGAGGGCGTGCCCAGGGAGGGCGTTGGGTTTAGCCACTGTGCATCTATGGCTAGCCACTTTTCTGCAACGGTTCGAATGGGTTCCGTGTTCGACAAAGCCGGTTAATTTGTCGGAATGTTTGAAGCTGTCCCTTGAAATGAAGAAAGCTTTGGAGTGTTGTGTGGTTAGTCGGTGA 1518 49.6 MKLLILATLTISSLLFPFTFLNFLFCSLLALSLNFWLIPGGFAWRNHHRSSANLPGPSGWPLLGTLPQMGPLAHRNLAAIAHSFKATRLMSFSLGTTRAIISSHPDTAKQILCGSAFSDRPIKQSARLMMFERAIGFAPNGVYWRNLRRIAANHMFSPRRISDLEGLRREVGVEMTEEMSRNMTIDGVVRLREVLQKHTLKNIIESVFGSDFKTVRKNQLSEMVREGYELIAMFNWEDHFPVSFLDFGGVKRKCHELAGRVSVAVGQIVEERKRDKNEAKNDFLSALLTLPKEDQLNDSDMVAVLWEMIFRGTDTIAILLEWIMGRMILHPEIQAKAREEIDTCVGCNRHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVLIPAGTTAMVNMWAISHDPSIWKDPWTFRPERFIEDDMSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLATFLQRFEWVPCSTKPVNLSECLKLSLEMKKALECCVVSR 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6378834 6381937 - CmaCh18G006990.1 Cma18g00699 314037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00699 505 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 Gene3D Cytochrome P450 43 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cma18g00699 505 SUPERFAMILY Cytochrome P450 55 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PANTHER CYTOCHROME P450 78A7-RELATED 7 505 - -
Cma18g00699 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 7 505 - -
Cma18g00699 505 Pfam Cytochrome P450 55 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00699 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g01064 Cma-Chr13:8065753 Cma18g00699 Cma-Chr18:6378834 0 dispersed
Cma17g00500 Cma-Chr17:3196541 Cma18g00699 Cma-Chr18:6378834 5.74E-173 dispersed
Cma18g00699 Cma-Chr18:6378834 Cma20g01100 Cma-Chr20:8558485 4.78E-163 dispersed
Cma18g00699 Cma-Chr18:6378834 Cma05g00453 Cma-Chr5:2082462 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00699 - - csv:101212611 893.264