Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00700 ATGGCCGACGATTGTCCAGATAAGAATATCCTCCAGAGCACTGCTCTTCTCCAGTTTCGATTCGATTTGGAAAGATTTGGAACGATCGATTCTGTAGTATTCGTTAATAGTCTACGAGAGTGTTTAATAATTTGGAAGGAAATTTGGGGAATGAGTTGCAGGAGCGTGATGAGCGTACCGGCGGATCAAGGATTGTTTCTATCAATGCTTCTGAAACTTATGAACGCAAAGAAAACGATAGAGATCGGCGTATTCACCGGCTATTCGCTCCTAACCACTGCGCTAGCGCTGCCCGCTGATGGTCAGATAACAGCCATTGATGTAAACAGAGAATCATTTGAGATCGGTTTGCCATTTTTCAAAAAGGCAGGAGTTGATCACAAGATCAATTTTGTGGAATCAATGGCATTGGTTGTCCTCAACGACCTCATCAATGACGACACAAATACCGAATTTGATTTTGCATTTGTGGATGCTGTGAAAGGAGAATACATTAAGTACCACGAGTTACTTTTGAGATTGGTGAAAGTAGGTGGAATAATTGCATATGACAATACTTTATGGTATGGATCAGTGGCACAAAATGATGACGTCGTTCCTCATGATTTGAAAGCTAATAGAAGTCATATACGAGAATTCAATGCTTTTTTAGTTAATGATTCACGTGTGGAGATAGCTCTCCTCTCCATTGGAGATGGCCTCACTCTTTGCCGACACGGTGGGATGATGAGCGCGAGAGATGAGGAATCAGAGAACTACGGAGATTATTTGGCGCTGCTCACACATTTCCTTCGCCGTCTCCGGATGCTTATTATGAAATTTTCACCAAGGCAGGATGCTCTAAGAGCTCTGTGGTATGCAGCTTATCCTGATCAAGAGCTTCAGGCGTTGACATCTTTCCAATGCCTGTTAAGAAAACAAGGAAGAAAACCAGCTGCTTAG 942 42.68 MADDCPDKNILQSTALLQFRFDLERFGTIDSVVFVNSLRECLIIWKEIWGMSCRSVMSVPADQGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRESFEIGLPFFKKAGVDHKINFVESMALVVLNDLINDDTNTEFDFAFVDAVKGEYIKYHELLLRLVKVGGIIAYDNTLWYGSVAQNDDVVPHDLKANRSHIREFNAFLVNDSRVEIALLSIGDGLTLCRHGGMMSARDEESENYGDYLALLTHFLRRLRMLIMKFSPRQDALRALWYAAYPDQELQALTSFQCLLRKQGRKPAA 313
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 6382804 6392963 - CmaCh18G007000.1 Cma18g00700 314038
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00700 313 CDD AdoMet_MTases 80 183 - -
Cma18g00700 313 Gene3D Vaccinia Virus protein VP39 45 239 IPR029063 -
Cma18g00700 313 PANTHER O-METHYLTRANSFERASE-RELATED 52 238 - -
Cma18g00700 313 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 47 239 IPR029063 -
Cma18g00700 313 Pfam O-methyltransferase 54 239 IPR002935 GO:0008171
Cma18g00700 313 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 11 240 IPR002935 GO:0008171
Cma18g00700 313 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 52 238 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00700 Cma-Chr18:6382804 Cma18g00702 Cma-Chr18:6407403 1.56E-112 dispersed
Cma18g00700 Cma-Chr18:6382804 Cma18g00701 Cma-Chr18:6402209 1.12E-102 tandem
Cma18g00700 Cma-Chr18:6382804 Cma04g01831 Cma-Chr4:9243157 1.20E-06 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00700 K00588 K13272 csv:101212121 290.812