Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma18g00701 | ATGGCCTACTGTTCTAAGAAGAACATCCTCCAGTGCCCTGCTCTTCTCCAGTATATACTGGAAGAGAATTCGTATCCGAGAGAGCACGAACAGTTGAAGGAACTCAGAGAAGCCACGTTAGAAACGTTAAAGTCATGGAGCGTGATGAGCGTACCGGCGGATCAAGGATTGTTTCTATCGATGCTTCTGAAACTGATGAACGCGAAGAAAACGATAGAGATCGGCGTATTCACTGGCTATTCGCTCCTAGCCACTGCGCTAGCACTGCCCGCTGATGGTCAGATTATGGCTGTTGATGTGAACAAAGAATCATTTGAGGTTGGCTTACCATTTATAAAAAAAGCCGGAGTTGATCATAAGATCAATTTTGTAGAAGCACAGGCGTCGGTCTTTCTCAACGACCTCATCAATGATGGAAAAGAAGGAGAATTTGATTTTGTGTTTGTAGATGCTAACAAAGAAGGGTACATTAAATATCACGAATTTCTCTTGAAACTGGTGAAGGTAGGTGGAGTGATTGCATACGACAATACCCTTTGGTTTGGATCAGTGGCACTAAGCGAAGACGACGTTGATGAGAATTTAAAGGTTAATAGAAGTCATTTGCGAGAACTCAATGCTTTTCTTGTTAATGACTCGCGTATCGAGATAGCTCTCCTCTCTATTGGAGATGGTCTCACTCTCTGCAGGCGTATTCAGTAA | 702 | 43.16 | MAYCSKKNILQCPALLQYILEENSYPREHEQLKELREATLETLKSWSVMSVPADQGLFLSMLLKLMNAKKTIEIGVFTGYSLLATALALPADGQIMAVDVNKESFEVGLPFIKKAGVDHKINFVEAQASVFLNDLINDGKEGEFDFVFVDANKEGYIKYHEFLLKLVKVGGVIAYDNTLWFGSVALSEDDVDENLKVNRSHLRELNAFLVNDSRIEIALLSIGDGLTLCRRIQ | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 6402209 | 6404067 | - | CmaCh18G007010.1 | Cma18g00701 | 314039 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma18g00701 | 233 | Pfam | O-methyltransferase | 25 | 232 | IPR002935 | GO:0008171 | |
| Cma18g00701 | 233 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 8 | 232 | IPR002935 | GO:0008171 | |
| Cma18g00701 | 233 | PANTHER | O-METHYLTRANSFERASE-RELATED | 5 | 232 | - | - | |
| Cma18g00701 | 233 | PANTHER | FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE | 5 | 232 | - | - | |
| Cma18g00701 | 233 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 15 | 231 | IPR029063 | - | |
| Cma18g00701 | 233 | Gene3D | Vaccinia Virus protein VP39 | 1 | 233 | IPR029063 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma18g00701 | Cma-Chr18:6402209 | Cma18g00703 | Cma-Chr18:6423744 | 3.38E-139 | dispersed | |
| Cma18g00700 | Cma-Chr18:6382804 | Cma18g00701 | Cma-Chr18:6402209 | 1.12E-102 | tandem | |
| Cma18g00701 | Cma-Chr18:6402209 | Cma18g00702 | Cma-Chr18:6407403 | 2.81E-145 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma18g00701 | K00588 | K13272 | csv:101212121 | 335.109 |