Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00702 ATGTACAACGCGCTGTATGCTATAAAACGCTCTCAGGAAGTCGTTCGTTCGTTCATTGCAGGGGAGGTCATGGCCGGCGATTCTAAGAACATCCTCCAGTGTCCTGCTCTTCTCCAGTATATACTGGAAGAGAATTCGTATCCGAGAGAGCACGAACAGTTGAAGGAACTCAGAGAAACCACGTTAGAAACGTTCAAGTACTGGAGCGTGATGAGCGTACCGGCGGATCAAGGATTGTTTCTATCAATGCTTCTGAAACTGATGAACGCAAAGAAAGCGTTAGAGATCGGCGTATTCACTGGCTATTCGCTCCTCACCACTGCGCTAGCACTGCCCGCTGATGGTCAGATTACAGCCGTTGATGTGAATAGAGATTCATTCGAGATTGGCTTGCCTTTTATAAAAAAAGCTGGAGTTGATCATAAGATCAATTTTGTAGAATCACAGGGAATGCCTGTCCTCAACGACCTCCTCAATGACGGAAAAGAAGGAGAATTTGATTTTGCATTTGTGGATGCTAATAAAGATGAGTACATTAAATATCACGAATTGCTTTTGAAATTGGTGAAAATCGGCGGTGTAATTGCCTATGACAATACCTTGTGGTTTGGAACAGTGGCACAGAGTGACGACGTCGTTGACGAGAAATTAAAGGCTAGTAGAGGCCATACACGAGAACTCAATGCTTTTCTTGTTAATGACTCGCGCGTTGATATAGCTCTCCTCTCGGTTGGAGATGGTCTCACTCTTTGCCGGCGTATTAAGTAA 768 44.53 MYNALYAIKRSQEVVRSFIAGEVMAGDSKNILQCPALLQYILEENSYPREHEQLKELRETTLETFKYWSVMSVPADQGLFLSMLLKLMNAKKALEIGVFTGYSLLTTALALPADGQITAVDVNRDSFEIGLPFIKKAGVDHKINFVESQGMPVLNDLLNDGKEGEFDFAFVDANKDEYIKYHELLLKLVKIGGVIAYDNTLWFGTVAQSDDVVDEKLKASRGHTRELNAFLVNDSRVDIALLSVGDGLTLCRRIK 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6407403 6409065 - CmaCh18G007020.1 Cma18g00702 314040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00702 255 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 253 IPR029063 -
Cma18g00702 255 CDD AdoMet_MTases 92 197 - -
Cma18g00702 255 Pfam O-methyltransferase 47 254 IPR002935 GO:0008171
Cma18g00702 255 Gene3D Vaccinia Virus protein VP39 23 255 IPR029063 -
Cma18g00702 255 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 30 254 IPR002935 GO:0008171
Cma18g00702 255 PANTHER O-METHYLTRANSFERASE-RELATED 26 254 - -
Cma18g00702 255 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 26 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01751 Cma-Chr11:11628039 Cma18g00702 Cma-Chr18:6407403 3.99E-87 dispersed
Cma18g00700 Cma-Chr18:6382804 Cma18g00702 Cma-Chr18:6407403 1.56E-112 dispersed
Cma18g00702 Cma-Chr18:6407403 Cma19g00604 Cma-Chr19:6614743 3.04E-87 dispersed
Cma18g00701 Cma-Chr18:6402209 Cma18g00702 Cma-Chr18:6407403 2.81E-145 tandem
Cma18g00702 Cma-Chr18:6407403 Cma18g00703 Cma-Chr18:6423744 7.14E-149 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00702 K00588 K13272 csv:101212121 328.946