Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00707 GAGTTCCATAGGCAACCACCTCTCTTCTTCTTCAACAACATTTCTCAATTCCTCTTCTTCATTCCGATCAACCTCCATATTCTCGTCGCCGTTCGATTCCTCTTTTTCTCCATTTTTTCTGCTTACTGCATCCTTCGCCGGTCTCCGTCGCCGCCGCTTTCGAGAGGGAAAACGACGGTGGTGATGATGAAGAAGAATCTGTGGTTTCTCCTCTTCATTTTTCACTTTCATGTCTCGTTCAAGGTTTTAGCCCTTTCGCCGGACGGTATTTCGCTTCTTTCTCTCAAGTCGGCGGTTGATCAGTCGCCTGATGCATCTATTTTCTCTGATTGGAACGAGAATGACTCCACGCCTTGCCGATGGGCTGGCATTTCTTGCATGAATGTTTCCGGTGATTCGCGTGTGGTTGGGATTGCTCTCTCTGGTAAGAGTCTCCATGGCTATATTCCTTCTGAGCTCGGTTCGCTTGTTTATCTCCGGCGATTGAACCTCCATAACAACAATTTTTACGGCTCGATACCGGAGCAGTTGTTTAATGCTACCTCTTTGCATAGCTTATTTCTATATAGTAATAATCTCTCTGGTCCTTTTCCCCCTTCGATCTGCAACATTCCGAGGCTTCAAAACCTCGATCTCTCTAACAATTCTTTCGATGGACCAATCCCCGATGAATTGAAGAATTGCAAGCAATTGCAGCGTTTGATACTCTCTAGAAATCAATTTGAAGGAGAAATTCCTTCTGGTGTGTGGTCCGGGATGGATAATTTACGGCAACTCGACCTCTCATCGAACGATTTCAGTGGACCGATTCCGGAGGATTTGGGGGAACTGACGACACTTTCCGGTACGCTTAACCTGTCCTTCAATCATTTATCAGGAAAAATTCCGAAGATGCTAGGAGATTTGCCGGTGACGGTTAGTTTCGACCTCCGGAGCAACAATTTGAGTGGAAGCATACCTCAGACTGGTTCTTTTGCAAATCAGGGACCAACTGCATTTCTCAACAATCCTAAGTTGTGCGGATTTCCTCTTCAGAAATCCTGTGGGAGTTCAGAGCGTGGCTCACCGGGAAATCCGGCTTCTAGGCCTTCGTACAATGCCCCTGGAAAAGGCTTGGGCGCCGGATTAATCATTTTCATCTCTGCCGCCGATGCCGCCGGAGTGGCGTTTATCGGCCTGGTAATAGTATACATATATTGGCGAAGTAAAGACAATCCGAACGGCTGTAGTTGTACGTCCAAAGGAAAACTCGGAGGGAACCAGAAAAACGATCTATGCAATTTTCCTTGTATGAATGGACATGATAAGAACGAGGAGTCCGAAATGGAGGAACAGGAGAACAGTGATGGAAACAGAGAAGAGGGAGGGCTTGTGGCCATAGACAAAGGCTTTACGTTCGAGCTGGACGAGCTGCTGAGAGCATCGGCCTATGTGCTGGGAAAGAGTGGATTGGGGATTGTGTACAAAGTGGTGCTCGGAAATGGGATTCCGGTGGCCGTACGGCGGCTGGGCGAAGGCGGAGAACAGAGGTATAAGGAGTTCGCGGCGGAGGTGCAGGCCATTGGAAGGGTAAAACATCCCAATATTGTGAAACTGAGAGCTTATTACTGGGCGCCAGATGAGAAGCTCCTGATCAGTGATTTTATCTCCAATGGAAACTTGGCCTCTGCACTTCGCGGGAGAAACGGGCAGCCATCTTCAACCCTTTCATGGTCAACCAGACTACGAATTGCCAAAGGAACTGCAAGGGGATTGGCTTATCTCCACGAGTGCAGTCCAAGAAAGTTCGTCCATGGCGACATCAAGCCCTCCAACATTCTCCTCGACAACGAATTCCGCCCCCACATCTCCGACTTCGGCCTCAACAGATTGATCACCATCACCGGCAACAATCCCTCCTCCTCTGGCGGCCTCATCGGCGGCGCCTTCTCCTATCTCAAATCCGCCCCAACCGACCGCAACAACAACTACTGCGCGCCGGAGGCTCGAGCTCCCGGCGGCCGCCCTACCCAAAAATGGGACGTCTATTCCTTCGGTGTCATGGTCCTCGAATTGCTCACCGGAAAGCCGCCGGAGATTTCTCCGAACGGGTCGAGTTCTTTGGAGATTCCGGATTTGGTTAGGTGGGTCAGGCAAGGGTTTGAAGAAGCTAAGCCGTTGTCGAATTTGGTTGACCCTTCTCTTCTACAAGAAGTACATGCCAAGAAAGAGGTGCTTGCTGTATTCCACGTGGCGCTCGCCTGTACAGAGAGTGACCCGGAAGTTCGGCCCAGAATGAAAACGGTGTCGGAGAGTTTCGACAGGATTGGATGA 2313 49.81 EFHRQPPLFFFNNISQFLFFIPINLHILVAVRFLFFSIFSAYCILRRSPSPPLSRGKTTVVMMKKNLWFLLFIFHFHVSFKVLALSPDGISLLSLKSAVDQSPDASIFSDWNENDSTPCRWAGISCMNVSGDSRVVGIALSGKSLHGYIPSELGSLVYLRRLNLHNNNFYGSIPEQLFNATSLHSLFLYSNNLSGPFPPSICNIPRLQNLDLSNNSFDGPIPDELKNCKQLQRLILSRNQFEGEIPSGVWSGMDNLRQLDLSSNDFSGPIPEDLGELTTLSGTLNLSFNHLSGKIPKMLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPKLCGFPLQKSCGSSERGSPGNPASRPSYNAPGKGLGAGLIIFISAADAAGVAFIGLVIVYIYWRSKDNPNGCSCTSKGKLGGNQKNDLCNFPCMNGHDKNEESEMEEQENSDGNREEGGLVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGRNGQPSSTLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNEFRPHISDFGLNRLITITGNNPSSSGGLIGGAFSYLKSAPTDRNNNYCAPEARAPGGRPTQKWDVYSFGVMVLELLTGKPPEISPNGSSSLEIPDLVRWVRQGFEEAKPLSNLVDPSLLQEVHAKKEVLAVFHVALACTESDPEVRPRMKTVSESFDRIG 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6442392 6446476 - CmaCh18G007070.1 Cma18g00707 314045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00707 770 Gene3D Phosphorylase Kinase; domain 1 465 548 - -
Cma18g00707 770 CDD STKc_IRAK 479 769 - -
Cma18g00707 770 SUPERFAMILY L domain-like 90 345 - -
Cma18g00707 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Cma18g00707 770 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 69 770 - -
Cma18g00707 770 Pfam Leucine rich repeat N-terminal domain 87 126 IPR013210 -
Cma18g00707 770 SUPERFAMILY Protein kinase-like (PK-like) 478 763 IPR011009 -
Cma18g00707 770 Pfam Leucine rich repeat 205 266 IPR001611 GO:0005515
Cma18g00707 770 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 69 770 - -
Cma18g00707 770 SMART serkin_6 477 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma18g00707 770 Gene3D Ribonuclease Inhibitor 249 350 IPR032675 -
Cma18g00707 770 Gene3D Ribonuclease Inhibitor 87 248 IPR032675 -
Cma18g00707 770 Pfam Protein kinase domain 478 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma18g00707 770 ProSiteProfiles Protein kinase domain profile. 473 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma18g00707 770 Gene3D Transferase(Phosphotransferase) domain 1 549 770 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01825 Cma18g00707 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02078 Cma-Chr4:14146147 Cma18g00707 Cma-Chr18:6442392 0 dispersed
Cma07g01308 Cma-Chr7:7405894 Cma18g00707 Cma-Chr18:6442392 2.63E-170 dispersed
Cma18g00707 Cma-Chr18:6442392 Cma18g00997 Cma-Chr18:8398722 0 dispersed
Cma18g00707 Cma-Chr18:6442392 Cma04g01825 Cma-Chr4:9208413 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69298 PF00069 Pkinase 3.50E-31 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00707 - - cmax:111466327 1553.11