Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00719 ATGGATGACGAGATCGGTGAAGAGTTCAAGAGAAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCAAGAAATGTGTTACGTTCTGTATTAATTATAGTCTAAAGCCTTCGGATATAGTTTCTAGCTGGGAAGTCTACTATCTCAACAGGCAATTAGATGGGTCAATTGTACAAATTGCACAGATGGATGGGTTTTTACAACATTTACAGAATGAGCAAAAAGAAGCAATCATTAAAGAGGAACCAGATCTTCATGTTTATTCGAGCAAAGATGTGGACATGATTTTGAATGATGAGGATGAAGATCCAAAGGAAGACATTCTTAAAACTCCAAATGGGAAATCTCAGGGCCTCCACAAGGATCGATTTGATTTGACCCCTTACACAAATGAAGGCTTGTTCTCTTCAGGAAAACCTTCAAAGCATGTGACACCCTTCGGCCAAAGAACAGAAAAATTTGCTGTGAGGTTCAGCATTAATAATGTGCCTGATAAGGAGACTGCTGAGGTGGAAGATAATTGCGAGAATGATGAAGATGCAATCATCAAGAAGGTTCTACCCCTGCAAGGATGCTCCCTGACAGTCCATGGATCAGGATTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAGGGTTGAAGATAGGTTTAATGCACTAGAAAACCGAATCGTGAAGCATGCAAAAGCTCTTGTTGCATCTGGGCTCTATGAAGAAGTAGTTGACCCTACGGTTGCTTCGCAGAAAAGCTTGTTTGCAGTAGGCATGATTTGTTGTGATGGTGATGGACACTTGAACGATAAGTCCACCATGTTGCAAAGCAGTGTTGAACACTCAGGAGGGCAGCGGGTTCGTTTAGAATTACAAAACTTAAGCCAGTTTTCAATCTTCCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATAGCATCCAAACTTGTAGATTCATTTCCTTTGTCTGCCACTATCGATCCCATTCTGCCTCCAGCAAAAAAGATAGCTTTGGACCATGATATCCAGCCAATTTCTTCTACACATTCAGAATTATCAATGATTATTGCATCAGGCCCCTATACAACGACAGACAACATATTGTTTGAGCCTTTGACAGAGTTACTAGCATATGCAAAAAGAAAGCCTCCTCAGCTACTAATATTGCTTGGGCCATTTGTTGATTCTGAACATTCTGATATCAAGAGAGGCACGGTAGAGATGAGCTTTGAGGAAATTTTCAAGTTTGAAGTTCTCAGAAGGGTGCAAGATTATGTAGAACACATGGGTCCTGATGCACGTGTACTTTTGATGCCATCTATTAGGGATGCTAATCACGACTTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCCGATCTTAGACTTCAGGTATCTAGTCTCCCGAACCCAGGCATTTTGGAAGCAAATCAGGCAAAGATAGCCTGCTGCACCATGGATATCCTCAGACACCTTAGTGGAGAAGAGCTGTCAAGAAATCTAACAAAGGGAACAGCCAACGACCGTCTGAGCACACTTGCAAGTCATATCCTCCGGCAGCGCAGCTTTTATCCTCTATACCCCCCTGCCGAAGGAGTGCCACTCGACTTTTCGCTTGCCCCAAAAGCTCTTGACATCTCTGTAATACCCGATATTCTCATTCTTCCATCCGACATGAAACACTTCGTGAAGGTTATATCTCTTGGTGAGGGACGTGCGGATGAAGAGCGAGCGAACTGCGTGTGTGTGAATCCAGGAAGATTGGCCAAGGGTGAAGGAGGAGGTACTTTTGTAGAGCTTAAATACTTCGGTACGCCTGACAAGTTAAACGCTGCAGTTGTCAGCATATGA 1863 43.16 MDDEIGEEFKRSGFTFDEEEEILKKCVTFCINYSLKPSDIVSSWEVYYLNRQLDGSIVQIAQMDGFLQHLQNEQKEAIIKEEPDLHVYSSKDVDMILNDEDEDPKEDILKTPNGKSQGLHKDRFDLTPYTNEGLFSSGKPSKHVTPFGQRTEKFAVRFSINNVPDKETAEVEDNCENDEDAIIKKVLPLQGCSLTVHGSGFGLEPNCRFMYDRVEDRFNALENRIVKHAKALVASGLYEEVVDPTVASQKSLFAVGMICCDGDGHLNDKSTMLQSSVEHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALDHDIQPISSTHSELSMIIASGPYTTTDNILFEPLTELLAYAKRKPPQLLILLGPFVDSEHSDIKRGTVEMSFEEIFKFEVLRRVQDYVEHMGPDARVLLMPSIRDANHDFVFPQPAFDIPSDLRLQVSSLPNPGILEANQAKIACCTMDILRHLSGEELSRNLTKGTANDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGRADEERANCVCVNPGRLAKGEGGGTFVELKYFGTPDKLNAAVVSI 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6508527 6514079 - CmaCh18G007190.1 Cma18g00719 314057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00719 620 Gene3D - 342 510 - -
Cma18g00719 620 Gene3D - 511 616 - -
Cma18g00719 620 Coils Coil 211 231 - -
Cma18g00719 620 Gene3D - 1 76 IPR043034 -
Cma18g00719 620 Pfam DNA polymerase alpha/epsilon subunit B 359 568 IPR007185 GO:0003677|GO:0006260
Cma18g00719 620 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 620 IPR016722 -
Cma18g00719 620 PIRSF DNA_pol_alpha_2 1 615 IPR016722 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00719 K02321 - csv:101206268 1112.44