Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00720 ATGGATTTTGCTTCTGTAATCGTAAATGCTGTGTTTATTTTTGCATTTTCGATATGGGTTTTGGTTCATTTTCGATGTGGAAACCCTCGATTAAGAAACGCAGCGGCTCGAGGATCTAAATGGCTGATCAGAATCACAATCTTTTCTAATGCTGTTCTTCCGTTCTTGTATTGTGGTTTTGCTGTTTATGAATATTTGAATAGCAAATTTGTTTGTTGGGAATTGGCCATTTCTGCTTTAACTTGGAGTTTGGCTGCTGCTATTGCTATCTACTGGAGAAATGGTGTGTATCATCAAGGCAAACCGTGGCCTATGATTCTAATTGTTTGGTGGGTTTTCTCTTGTTTCTATGGTTTAGGTTGTTTGATTCTTGTCCTGCTTACCCATTTGAAATCCATGGAAATCCCCCATTTTCTTCCAAAACCCACCATTGTAGACTGGTCTTCCTTCACTTTGTGTTTGATAATCTGTTGTACTGCCCTGACTGTTAGCTATTCCAAGAACCATAATGATCTTGAGAAGCTATTGCTTCAAACAGAGAATGTTTGTTCTTCTGAAGATCATGGTGGTTTTGTGAGTCCTGGATTGTGGAGTCAAATTACATTCCAATGGATGAACCCTCTGTTCAAAAAGGGAAGGATTCAAAAACTTGAATTAGCTCATGTTCCTTGTGTTCCTCAATCTGAAACAGCCGAGTATGCTTCCATGTTGCTCGAAGAATCGATTGAGAGAACGAAAATCGAATCGTCTTCCTTGCCTAAAGCTATTGTTCTAGCTACATGGAAGCCCCTGGTCTTAACAGCAATCTTTGCAGGTGTCAACACATTAGCGTCGTTTATGGGGCCTGTTCTAATCACCAATTTTGTGAACTATCTATTGCAAAAGGACGACGACTTGAGCAACCGTGACGGGTTGATTCTTGCGTTCTTCTTCTTTTTCGCCAAGACATTGGAGTCTCTTACTCAAAGACAATGCTATTTCGGCACTCACCGTCTTGGTATACAGATAAGAGCAGCTCTTACAGTGATGATTTACAAGAAATGTGTTTCTATAAATGCTGCTGGTCCAAGTAATGGTAAAATAACAAATTTGATTAACGTAGATGTTGAAAGAATTGGGGACTTCTCTTGGTATATTCACAAGATTTGGTTGCTTCCTGTTCAAGTAGTTCTAGCTCTTGTTATCCTTTATATGAATCTTGGACTTGCTCCTTCAATTACTGCTCTCTTAGCCATAGTATTCATAATGGTGGGCAATACGCCCTTGGCGAATATTCAAGAAAGTCTACACTCGAAGATAATGGATGCGAAAGATTCCCGGATCAAATTGACCTCAGAGACTCTAAGAAACATGAGAGTCTTGAAACTGCATTCTTGGGAACAGACGTTTTTGAAGAAGATCTTGAAACTTAGAGACGTTGAGAGAGGCTGGTTGAAGAGATACCTCTATACATGCTCGGTTATAGCAGTTCTCTTTTGGGTGTCACCAACTTTAGTTTCAGTAGTTACTTTTGGTACTTGTGTTTTGATGAATGTCTCTCTAACAGCAGGCACAGTGTTATCAGCCATAGCTACTTTTCGGATCTTACAAGAACCGATTTATAATCTACCTGAGCTAGTTTCCATGATTGCTCAAACGAAAGTTTCCCTCGACCGTATCCACGAGTTCATTCGAGAAGAAGATCAAAGGAAACAGATTTATTATCCTCCATCTAGTTCATCAGACATCATGGTTGAAATAGAGGTGGGAGAGTATTCATGGGATGCCAGTGATCGTCTAAACGTTAAACCGACGATAAACATTGCTGAGAAGTTGCAAATACCAAAGGGTTACAAGGTTGCAGTTTGTGGATCGGTCGGTTCAGGAAAATCGAGCTTACTTTGTAGCATACTAGGCGAGATTCCACAGATTTCAGGAACACAAATGAAGGTACATGGAACTAAAGCTTATGTTCCTCAAAGTGCTTGGATTCAATCAGGCACGGTTCGAGAGAACGTGCTCTTTGGGAAGGAAATTGATGAACGTTTTTATGGGGATGTGTTAGAAGGCTGTGCTTTGGACCAGGATATCAAGCTGTGGCTGGATGGAGATTGTACTTTATTGGGAGAGAGGGGGCTGAACTTAAGTGGAGGCCAAAAGCAGAGAGTTCAATTGGCAAGGGCTGTCTATAGTGATGCTGATGTTTACTTCCTGGACGATCCGTTTAGCGCCGTGGACGCTTGTACTGGAACACATTTGTTCAAGAGATGTCTTTTGCAACTTTTGTCTGATAAGACGGTCTTATATGCTACTCATCATTTGGAATTCATAGAAGCCGCCGACCTCGTTCTGGTGATGAAGAATGGTCATGTTGTTCAATCAGGAAAGTACGCAGAATTGATATCAGACTCAAATGGTGAGCTTGCTAGGCACATTGCAGCACACAGAAAGTCATTGAATGGAGTTAAACCATTCAAAGAGGATAAACCTCATCTTAAACCATGTCAGATGGAAGCTCAAGATGAAAATTCTTCCCTGACCCTTGGAAATGGAGACCTTATGAGGACTCAAGAAGAGGAATCTCAAACAGGTCGTGTAAAGTGGAGCGTATACTCGACCTTCATTACGTCGGCTTATAAAGGAACTCTTGTTCCTGTTGTCCTTCTATGTCAAGTTTTCTTTCAAATCCTTCAGATGGGTAGCAATTACTGGATTTCTTGGGCAACAGAAGAAGAAGGCAAGGTCAGCAGAGAGCAACTGATAGGGATCTTCATTTTGATGTCGGGCGTGAGCTCCGTCTTTATATTAGGCCGGGCCGTTGTGATGGCAACCATTGCTATTGAGACTGCACAACGGATGTTTCTTGGAATGGTGACATCAATTTTTGCTGCACCTATTTCTTTCTTTGATGTCAAACCTTCAAGCCAAATCCTTAACAGATCATCTAATGATCAAAGCACTTTGGATACAGATATCCCTTATAGATTAGGAGGATTGGCCTTTGCACTAATTCAGCTGTTGAGTATCATTATCCTGATGTCCAAGGTTGCATGGCATGTTTTCCCCCTCTTCCTTGTCGTCCTCGCTATTTCTATATGGTATCAGGGATACTACATCAGTACTGCTAGAGAATTAGCTAGAATGGTTGGGATTCGAAAAGCTCCAATTCTTCATCACTTTTCTGAAACAGTTGTAGGTGCAACTATCATTCGTTGTTTCAATCAAGAAGATCGTTTCTTAACGAAAATACTCGAACTAGTTGATGATTATTCTCGTATCGTTTTCCACAACTCAACTTCAATGGAATGGTTATGCCTCCGAATCAATTTTCTTTTCGACACAGTCTTCGTTCTTGTCCTTGTCATCTTAGTAACCCTTCCTAGATCAGCTATCAACCCAAGTTTAGCAGGATTAGCAGCCACATACGGTTTAAACTTAAACGTTCTTCAATCTTGGGTCATATGGAATCTATGCAATGTTGAGAACAAAATGATATCTGTTGAGAGAGTTCTTCAGTTTACTAACATAGCTTCTGAGGAGCCACCGGTGGTTCATGATTGTAGGCCAATGCCAGAATGGCCAAAGGAGGGGAACATAGAACTTGAGGACCTTCATGTTCAATACCGTCCTAATCTTCCAATGGTTTTGAAAGGAATCACTTGTACCTTCCCTAAAAGGAAGAAGATTGGTGTTGTTGGCAGGACAGGAAGTGGCAAGTCCACGTTAATCCAAGCACTTTTTAGGATGGTTGAGCCCTTTGCAGGAAGGATACTCATTGATGGAGTTGATATCGCTAAAATGGGTCTTCATGATCTGAGGTCTAGGCTGGGTATCATTCCACAAGACCCAACATTGTTCAAAGGAACCATGAGAACAAATCTTGACCCTTTGCAGCAACATACTGATCAAGAAATATGGGAGGTCCTTCGGAAGTGTCGGTTCGCCGAGATCTTCAAAACGGATCAAACAGTTCTTGAAGCACCAGTTGCTGAAGGTGGAGAGAATTGGAGTGTTGGACAGCGGCAGCTTGTTTGCTTAGCTAGAGTGCTTCTTAAGAAGCGTAGGATTCTTGTTTTGGATGAGGCAACAGCTTCCATTGATACTGCAACAGAGAATATAATCCAAGAAACGATACGAGACGAGACGAAAGGATGTACTGTTATCACCGTAGCTCATCGTATACCGACTGTTATCGACAATGATTTGGTTTTGGTTCTTGATGAAGGGAAGGTCATTGAATACGACAAGCCATCTCGACTACTCGAGAACAGTTCTTCTTCGTTTTCAAAATCAGATACCTGCACTACGCTCCTTGAAACTGGACTACGACTTCCACAGCTGGTGTGCTTCATGTCATTGCGTTTTCAGAAGAATCTTAAGAGAATTTGTGGTGTTCTTGATCGTTGTAAACTATTTGCTTATTTTCATGTATCCTCTGCAAATTTTTCGTCTCTGCTGGAACCTTCCATTTTTATAAGAGGTAGAGATTTGCAGCAAATAATACAATCTGAATATCAGACAAAACTTTCTGATATTGATTTGATCATTTCCAAAGTTCGGGTTGGTAGCAGCGAGGATGAAGTTTTTCAGTCTCTCTTACACGATCAAGCGTGTAACCGCATACACTTCTCCCATGAATTTGTTTACAAATTGCTCCAACGATTCAAAGATGATTGGAAGTCTGCATTGGGTGTTTTTAGATGGGCAGAGTCACTCTCTGGATTCAAGCACACACCAGATTTATATGACGTTATTATAGATACATTGGGGAAAACAAAGCAAATGGTCAAGATGAAAGGTATGCTAGAAGAAATGAAGGAAGCTCAGCTCGTAACGCTTAATACTCTAGCTAAGGCTATGCGAAGGTTTGCTGGTGCTGGACAATGGGAAGATGCTGTGAGAATATTTGATGATTTGGGAACCTTTGGGTTGGAGAAGAACACTGAATCCATGAATGTGCTGCTTGATACTCTGTGCAAAGAGAAGAGGGTTGAACAAGCTCGACGGATATATTTGGATCTTAAGTCCCATATATCCCCAAATGCCAACACGTTCAACATGTTTATTCATGGTTGGTGTAAAGTTGATAGAGTTGATGAGGCACATTGGACGTTACAAGAGATGAAAGGACATGGTTATCGTCCTTGCGTCATTAGTTATTCGACGATTATCCTATTCTATTGTCGTCATTGCAAATTTAGTAAGGTTTATGAGTTGCTTGATGAAATGGATACTCAAGGATGCCCAGCAAATGTCATCACTTACACTACTATCATGTGTTCACTAACAAAGTCAGAAGAATTTGAGGAAGCCTTGCAAATTGCAGAGAGAATGAAATCTGCTGGATGTGAACCCGATACACTGTTTTATAATTGTTTGATCCATACATTAGGGAGAGCGGGTAAAGTACGGGAAGCTATTCATGTATTCGAAGTAGAAATGCCGAGCAAGAGTGTTTTACCGAATACATCGACTTACAATTCTATGATTTCCATGTATTGTCATCGTGCACAAGAACAGAAGGCTATGAAATTGCTTGAGGAGATGGAGAAATCAGGGCTTTGTAAACCTGATGTCCAGACATATTACCCATTGCTCAAATCCTGCTTTAGAACTGGAAAGACGGACAATGTTTTGAGCAAGTTGTTGGATGACATGATGAATAAACAGCATTTGAGTCTTGATATATCAACTTATTCCCTTTTAATTCATGGTCTATGTAGAGCAAATAAGTGCGAGTGGGCTTACCAGCTATTTGAGAAGATGGTCGGTCAAGATATAAAGCCGAGATACCTTACATGTAAACTGCTTCTGGATGAAGTTAAGCAGAAGAACATGGATGAAGTTGCTGAGAGGATTGAAGATATCATGAAGAAATTATGCCTCCGTTATCACTTTGTTGGGCTCATAAGCACATGGGATATAGGTCGTCGGGTCGGGCGATTGGGTGTGGATGAAGTAAGTGTTGGTTTTCAAGAGGATTGGTCAATTGGAATTGAAGATATCATGAAGAAATTGCGACGAAGTTTATCATTCGTGATTTTGTTATCTGAGTGTCGTCTCAATTTTAATTTGGTTGCTCGAGATGCCTCCATTCTCACTTTGTTGGGTGATATAGATCGTCATGTTGGGCGATTGGGTGTTGATGAAATGAACTGGTCTATGCTTCTGGTAACTGATATGTTCTGGAGTAAATATGTTGAAATTCCTCCCTTTCCTGATATCATTTGTTCACTCTGCAACACACCTTTGAGATGTGATGCCAAACAACAGTCTGCAACAAAATGA 6267 40.82 MDFASVIVNAVFIFAFSIWVLVHFRCGNPRLRNAAARGSKWLIRITIFSNAVLPFLYCGFAVYEYLNSKFVCWELAISALTWSLAAAIAIYWRNGVYHQGKPWPMILIVWWVFSCFYGLGCLILVLLTHLKSMEIPHFLPKPTIVDWSSFTLCLIICCTALTVSYSKNHNDLEKLLLQTENVCSSEDHGGFVSPGLWSQITFQWMNPLFKKGRIQKLELAHVPCVPQSETAEYASMLLEESIERTKIESSSLPKAIVLATWKPLVLTAIFAGVNTLASFMGPVLITNFVNYLLQKDDDLSNRDGLILAFFFFFAKTLESLTQRQCYFGTHRLGIQIRAALTVMIYKKCVSINAAGPSNGKITNLINVDVERIGDFSWYIHKIWLLPVQVVLALVILYMNLGLAPSITALLAIVFIMVGNTPLANIQESLHSKIMDAKDSRIKLTSETLRNMRVLKLHSWEQTFLKKILKLRDVERGWLKRYLYTCSVIAVLFWVSPTLVSVVTFGTCVLMNVSLTAGTVLSAIATFRILQEPIYNLPELVSMIAQTKVSLDRIHEFIREEDQRKQIYYPPSSSSDIMVEIEVGEYSWDASDRLNVKPTINIAEKLQIPKGYKVAVCGSVGSGKSSLLCSILGEIPQISGTQMKVHGTKAYVPQSAWIQSGTVRENVLFGKEIDERFYGDVLEGCALDQDIKLWLDGDCTLLGERGLNLSGGQKQRVQLARAVYSDADVYFLDDPFSAVDACTGTHLFKRCLLQLLSDKTVLYATHHLEFIEAADLVLVMKNGHVVQSGKYAELISDSNGELARHIAAHRKSLNGVKPFKEDKPHLKPCQMEAQDENSSLTLGNGDLMRTQEEESQTGRVKWSVYSTFITSAYKGTLVPVVLLCQVFFQILQMGSNYWISWATEEEGKVSREQLIGIFILMSGVSSVFILGRAVVMATIAIETAQRMFLGMVTSIFAAPISFFDVKPSSQILNRSSNDQSTLDTDIPYRLGGLAFALIQLLSIIILMSKVAWHVFPLFLVVLAISIWYQGYYISTARELARMVGIRKAPILHHFSETVVGATIIRCFNQEDRFLTKILELVDDYSRIVFHNSTSMEWLCLRINFLFDTVFVLVLVILVTLPRSAINPSLAGLAATYGLNLNVLQSWVIWNLCNVENKMISVERVLQFTNIASEEPPVVHDCRPMPEWPKEGNIELEDLHVQYRPNLPMVLKGITCTFPKRKKIGVVGRTGSGKSTLIQALFRMVEPFAGRILIDGVDIAKMGLHDLRSRLGIIPQDPTLFKGTMRTNLDPLQQHTDQEIWEVLRKCRFAEIFKTDQTVLEAPVAEGGENWSVGQRQLVCLARVLLKKRRILVLDEATASIDTATENIIQETIRDETKGCTVITVAHRIPTVIDNDLVLVLDEGKVIEYDKPSRLLENSSSSFSKSDTCTTLLETGLRLPQLVCFMSLRFQKNLKRICGVLDRCKLFAYFHVSSANFSSLLEPSIFIRGRDLQQIIQSEYQTKLSDIDLIISKVRVGSSEDEVFQSLLHDQACNRIHFSHEFVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDVIIDTLGKTKQMVKMKGMLEEMKEAQLVTLNTLAKAMRRFAGAGQWEDAVRIFDDLGTFGLEKNTESMNVLLDTLCKEKRVEQARRIYLDLKSHISPNANTFNMFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVISYSTIILFYCRHCKFSKVYELLDEMDTQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGCEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQTYYPLLKSCFRTGKTDNVLSKLLDDMMNKQHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMVGQDIKPRYLTCKLLLDEVKQKNMDEVAERIEDIMKKLCLRYHFVGLISTWDIGRRVGRLGVDEVSVGFQEDWSIGIEDIMKKLRRSLSFVILLSECRLNFNLVARDASILTLLGDIDRHVGRLGVDEMNWSMLLVTDMFWSKYVEIPPFPDIICSLCNTPLRCDAKQQSATK 2088
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6515218 6526652 - CmaCh18G007200.1 Cma18g00720 314058

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00720 2088 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 580 806 IPR003439 GO:0005524
Cma18g00720 2088 Gene3D ABC transporter type 1, transmembrane domain 236 566 IPR036640 GO:0005524|GO:0016021
Cma18g00720 2088 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1815 1849 IPR002885 -
Cma18g00720 2088 TIGRFAM PPR: pentatricopeptide repeat domain 1677 1708 IPR002885 -
Cma18g00720 2088 TIGRFAM PPR: pentatricopeptide repeat domain 1783 1816 IPR002885 -
Cma18g00720 2088 TIGRFAM PPR: pentatricopeptide repeat domain 1891 1922 IPR002885 -
Cma18g00720 2088 TIGRFAM PPR: pentatricopeptide repeat domain 1818 1851 IPR002885 -
Cma18g00720 2088 TIGRFAM PPR: pentatricopeptide repeat domain 1746 1780 IPR002885 -
Cma18g00720 2088 TIGRFAM PPR: pentatricopeptide repeat domain 1711 1744 IPR002885 -
Cma18g00720 2088 CDD ABCC_MRP_domain2 1190 1410 - -
Cma18g00720 2088 Pfam ABC transporter 605 735 IPR003439 GO:0005524
Cma18g00720 2088 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1779 1814 IPR002885 -
Cma18g00720 2088 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1744 1778 IPR002885 -
Cma18g00720 2088 Pfam PPR repeat 1885 1916 IPR002885 -
Cma18g00720 2088 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 104 1420 - -
Cma18g00720 2088 SMART AAA_5 1218 1411 IPR003593 -
Cma18g00720 2088 SMART AAA_5 609 783 IPR003593 -
Cma18g00720 2088 CDD ABCC_MRP_domain1 578 782 - -
Cma18g00720 2088 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1709 1743 IPR002885 -
Cma18g00720 2088 Pfam ABC transporter transmembrane region 266 532 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cma18g00720 2088 Pfam ABC transporter transmembrane region 893 1119 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cma18g00720 2088 SUPERFAMILY ABC transporter transmembrane region 878 1175 IPR036640 GO:0005524|GO:0016021
Cma18g00720 2088 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 265 545 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cma18g00720 2088 CDD ABC_6TM_ABCC_D1 266 553 IPR044746 GO:0140359
Cma18g00720 2088 Gene3D Tetratricopeptide repeat domain 1807 1967 IPR011990 GO:0005515
Cma18g00720 2088 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1888 1922 IPR002885 -
Cma18g00720 2088 Gene3D - 1176 1426 IPR027417 -
Cma18g00720 2088 ProSitePatterns ABC transporters family signature. 708 722 IPR017871 GO:0005524
Cma18g00720 2088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 604 797 IPR027417 -
Cma18g00720 2088 Gene3D Tetratricopeptide repeat domain 1738 1806 IPR011990 GO:0005515
Cma18g00720 2088 Gene3D Tetratricopeptide repeat domain 1668 1737 IPR011990 GO:0005515
Cma18g00720 2088 Gene3D Tetratricopeptide repeat domain 1515 1667 IPR011990 GO:0005515
Cma18g00720 2088 Gene3D ABC transporter type 1, transmembrane domain 846 1173 IPR036640 GO:0005524|GO:0016021
Cma18g00720 2088 Gene3D - 572 819 IPR027417 -
Cma18g00720 2088 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 879 1155 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cma18g00720 2088 SUPERFAMILY ABC transporter transmembrane region 260 561 IPR036640 GO:0005524|GO:0016021
Cma18g00720 2088 Pfam Pentatricopeptide repeat domain 1732 1791 IPR002885 -
Cma18g00720 2088 Pfam PPR repeat family 1814 1863 IPR002885 -
Cma18g00720 2088 Pfam PPR repeat family 1639 1687 IPR002885 -
Cma18g00720 2088 PANTHER OS01G0902100 PROTEIN 104 1420 - -
Cma18g00720 2088 Pfam ABC transporter 1209 1357 IPR003439 GO:0005524
Cma18g00720 2088 CDD ABC_6TM_ABCC_D2 877 1167 IPR044726 GO:0140359
Cma18g00720 2088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1183 1418 IPR027417 -
Cma18g00720 2088 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1192 1426 IPR003439 GO:0005524
Cma18g00720 2088 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1674 1708 IPR002885 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00720 - - - csv:101219301 2363.96
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cma04g01814 Cma18g00720 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma17g01368 Cma-Chr17:9146720 Cma18g00720 Cma-Chr18:6515218 1.09E-14 dispersed
Cma18g00720 Cma-Chr18:6515218 Cma16g00082 Cma-Chr16:358537 0 dispersed
Cma14g01729 Cma-Chr14:12704979 Cma18g00720 Cma-Chr18:6515218 1.90E-96 transposed
Cma18g00720 Cma-Chr18:6515218 Cma04g01814 Cma-Chr4:9140791 1.56E-10 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1141 . . . . . . . . Cmo04g01910 Cmo18g00707 . Cma18g00720 . Car18g00666 . Cpe09g00569 Cpe01g01598 Bhi07g01868 . . Lac13g0089 Hepe10g1543 . . Cla05g02633 . Cec05g2863 Cco05g2895 Clacu05g2831 Cmu05g2678 . . . . . Lsi04g00654 . . Cme10g00632 Blo06g00821 Blo11g00984 . . . . . . . . . Cma04g01814 . Car04g01826 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011749 1 1 0 2 1 0 2 1 1 1 1 1 1 0 1 1 1 3 1 0 1 1 1 1 1 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma18g00720 Cma_Chr18 FPKM 1.438009 1.993113 0.943592 1.027209 1.964079 2.019845 2.384297 1.365066 1.2569 1.756866