Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00738 ATGCATCAACTTGGCAAGCTCCCACACGAATCCCTATGGCGCCTCTCTCAACTTTACGGTCCCATTATGAGCCTTAGCCTAGGTCGTAAAGAAACCATCATCATATCATCTGCCGAGACTGCTCGTGCCCTCTTGAAAACCCACGATCTTCAAAGTTGCAGTAGACCACAAACCCAAGCTTCAAAAAAATTTACTTATAATTTCCTTGATATTGGATTTTCGCCTTACTCTGATTACTGGAGAGAGATACGCAAAATTTGTATGCAAGAGTTGTTCAGTATGAAGAGGGTGATATCTTACCAACCCATTAGAGACCAAGAAGTTGGTTTATTTATTCAATCGATTTCGAAATTTGCTTCTTGTGGAGGCGTTGTTGATCTTACTAAAAAATCATTTGCTTTCACTAATGGTATTATTTTTAGAATTGCTTTTGGGAGAAAGAGGTCCGAAGGGGATGTATTTTATGAGCTTGTGAGTGAAGCTATCACATTGTTTGGTAGCTTTAGTGCTACTGAGCTTGTTCCTTTTATAGGGAAGACTATTGATTGGTTAAGTGGACGAGAAGCTAAATTTGAGAGAGTTTTTAATGAGATCAACGCTCTGTTGCAAGAGGTTATTGACGAACACCTTCATTCTGAGAGGCCTAAACTAGAACAAGACGATATCATTGATGTGCTTTTGAATATCCGTAAAAAGCAAGTTGAATCTTGTACTATTGTTATTACCCATGAAAACATCAAAGCTATTCTTTTGAACATATTTTTAGCAGGAACTGACACTAGCTCAGTTGCAGTAGTCTGGGCAATGGCAGAACTCACGAAGAACCCAAAATTGATGAAGAAAGCTCAAGAAGAAATCAGACACTATGTGGGAAACAAACGAAAAGTAACAGAGAGAGACGTAGAAGAGTTTCCATATCTGAAAATGATAGTGAAAGAGACACTAAGACTACATCCACCAGGACCTCTTCTTGTTCCAAGAGAAATCATCTCCCATTTCAAAATTGAAGGCTACGATTTTTACCCAAAAACAATGGTTCAAGTGAACGTTTGGGCAATTGGACGAGACCCCACATGCTGGACAGACCCAAAAAAGTTCATTCCAGAGAGATTTTCAGAGAGCTCGATCGATTACAAAGGACAACATTTTGAGTTCTTGCCATTTGGGGCTGGTCGGAGGATGTGCCCGGGGTTAAATATGGGGGTGAAAATTGTGGAGTTGGCTTTAGCAAATCTTTTGTACCATTTTGATTGGAAGCTGCCGAATGGGATGAAGGAGGAAGACTTGGACATGGAAGAGAATTCGAATTTGAGTCTCACCCTCCACAAAAAGTTGCCTCTCAAACTTGTACCTATTTTATACCATCCATGA 1371 39.97 MHQLGKLPHESLWRLSQLYGPIMSLSLGRKETIIISSAETARALLKTHDLQSCSRPQTQASKKFTYNFLDIGFSPYSDYWREIRKICMQELFSMKRVISYQPIRDQEVGLFIQSISKFASCGGVVDLTKKSFAFTNGIIFRIAFGRKRSEGDVFYELVSEAITLFGSFSATELVPFIGKTIDWLSGREAKFERVFNEINALLQEVIDEHLHSERPKLEQDDIIDVLLNIRKKQVESCTIVITHENIKAILLNIFLAGTDTSSVAVVWAMAELTKNPKLMKKAQEEIRHYVGNKRKVTERDVEEFPYLKMIVKETLRLHPPGPLLVPREIISHFKIEGYDFYPKTMVQVNVWAIGRDPTCWTDPKKFIPERFSESSIDYKGQHFEFLPFGAGRRMCPGLNMGVKIVELALANLLYHFDWKLPNGMKEEDLDMEENSNLSLTLHKKLPLKLVPILYHP 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6662137 6663708 - CmaCh18G007380.1 Cma18g00738 314076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00738 456 Gene3D Cytochrome P450 1 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS E-class P450 group I signature 349 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS E-class P450 group I signature 245 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS E-class P450 group I signature 308 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS E-class P450 group I signature 265 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS E-class P450 group I signature 16 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS E-class P450 group I signature 134 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PANTHER CYTOCHROME P450 71B11-RELATED 1 453 - -
Cma18g00738 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Cma18g00738 456 Coils Coil 279 299 - -
Cma18g00738 456 PRINTS P450 superfamily signature 309 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PRINTS P450 superfamily signature 256 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 Pfam Cytochrome P450 3 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00738 456 PANTHER CYTOCHROME P450 1 453 - -
Cma18g00738 456 SUPERFAMILY Cytochrome P450 2 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00738 Cma-Chr18:6662137 Cma18g00741 Cma-Chr18:6679052 2.88E-15 dispersed
Cma18g00749 Cma-Chr18:6724140 Cma18g00738 Cma-Chr18:6662137 5.74E-79 dispersed
Cma18g00736 Cma-Chr18:6646569 Cma18g00738 Cma-Chr18:6662137 4.60E-99 proximal
Cma18g00737 Cma-Chr18:6654457 Cma18g00738 Cma-Chr18:6662137 8.19E-96 tandem
Cma18g00738 Cma-Chr18:6662137 Cma18g00739 Cma-Chr18:6664021 3.78E-28 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00738 - K01773 cmos:111449354 826.624