Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00741 ATGGGGGTGAAAACTGTGGATTTGGCTTTAGCAAATCTTTTGTACCATTTTGATTGGAAGTTGCCGGAGGGTACGAAGGAGGAGGAGTTGGACATGGAAGAGAAATCGGGTTTGAGTCTTACCGTCCACAAAAACAAGAAGGGTAATTTTCCCCCAAGCCCACCAAAGCTTCCAATCATAGGAAACTTGCACCAACTTGGCAAGCTCCCACACAAATCCCTATGGCGCCTCTCTCAGCGTTACGGTCCTATTATCAGCCTCAGCCTATGCCATATAGAAACTATCATCATATCCTCTGCCGAGACTGCTCGCGCCCTCTTGAAAACCAACGATTTTCAAAGTTGCAACAGACCACAAACCAATGTTACAAAAAAACTCTCTTACAATTTTCTTGATATTGGGTTTTCGCCTTACAGTGATTATTGGCGAGAGATACGGAAAATTTGTATGCTTGAACTTTTCAGTATGAAGAGGGTGTTATCTTACGAAGCCATTAGAGAGCAAGAAGTTGGTTTGCTTATTGAATCAATTTCACAATCAGCTTCTTGTGAAGCTACTGTTGATCTTACTCAGAAATCGATTGCTCTCACTACTGATGTTATTTTTAGAATTGCTTTTGGGAAGTTGTTTAAAGTGGATGGATTTAATGAAATTGCAAGTGAAGTTGAGGTCCTGTTGGGAAGCTACGGTGCTTCTGAGTTTTTTCCTATTCCTTTTGTGGGGAAGATAATTGATTGGTTTAGTGGCCGAAAAGCTAGACTTGAGAGGGTTTTTAATGAGATGAATGTTCTGTTCCAAGAAGTAATTGATGAACATCTTCATTCTGCGAGGCCTAAACCAAAGCAAGATGATATCATTGATGTGCTTTTGGCTATCAATAAAAAGCAAGCTGAGTCTTGCAATGTTGTCATTACACATGAAAGCATCAAAGCTATTCTTTTTAACATAATTTTTGCAGGATTATCCACTAGTTCAGTTGCTATAGTTTGGGCAATGGCAGAACTAATGAAAAATCCGAAATGGATGAACAAAGCTCAAGAAGAAATCAGAAATCAAGTGGGAAACCACGGAAAGGTAAGAGAGAGAGACCTAGAAGACCTTTCATATTTGAAAATGATAGTGAAAGAGACACTAAGACTACATCCACCGGTACCCCTTCTTATTCCAAGAGAAACCATTTCCCATTTCAAAATTGAAGGCTATGATTTTCACCCCAAAACGATGGTTCAAGTGAACGTTTGGGCAATTGGACGAGACCCTACATATTGGAAACACCCAGAAGATTTCCTTCCAGAGAGATTTGTAGAGAGCTCAATTGATTACAAAGGACAACATTTTGAGTTTTTGCCATTTGGGAGTGGTCGGAGGATGTGTCCAGGATTGAATATGGGTGTGAAAATTGTGGAGTTGGCTTTAGCGAATCTTTTGTATCATTTTGATTGGAAGCTGCCGAATGGGATGAAGGAGGAGAACTTGGACATGGAAGAGAATTCTGGTTTGAGTCTCACCCTCCACAAAAAGTTGCCTCTCAAGCTTGTACCAACTTTATATCATCCATGA 1560 40.26 MGVKTVDLALANLLYHFDWKLPEGTKEEELDMEEKSGLSLTVHKNKKGNFPPSPPKLPIIGNLHQLGKLPHKSLWRLSQRYGPIISLSLCHIETIIISSAETARALLKTNDFQSCNRPQTNVTKKLSYNFLDIGFSPYSDYWREIRKICMLELFSMKRVLSYEAIREQEVGLLIESISQSASCEATVDLTQKSIALTTDVIFRIAFGKLFKVDGFNEIASEVEVLLGSYGASEFFPIPFVGKIIDWFSGRKARLERVFNEMNVLFQEVIDEHLHSARPKPKQDDIIDVLLAINKKQAESCNVVITHESIKAILFNIIFAGLSTSSVAIVWAMAELMKNPKWMNKAQEEIRNQVGNHGKVRERDLEDLSYLKMIVKETLRLHPPVPLLIPRETISHFKIEGYDFHPKTMVQVNVWAIGRDPTYWKHPEDFLPERFVESSIDYKGQHFEFLPFGSGRRMCPGLNMGVKIVELALANLLYHFDWKLPNGMKEENLDMEENSGLSLTLHKKLPLKLVPTLYHP 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6679052 6687116 - CmaCh18G007410.1 Cma18g00741 314079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00741 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Cma18g00741 519 PANTHER CYTOCHROME P450 1 46 - -
Cma18g00741 519 Gene3D Cytochrome P450 39 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PANTHER CYTOCHROME P450 71B11-RELATED 49 516 - -
Cma18g00741 519 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 SUPERFAMILY Cytochrome P450 51 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 Pfam Cytochrome P450 51 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00741 519 PANTHER CYTOCHROME P450 49 516 - -
Cma18g00741 519 PANTHER CYTOCHROME P450 71B11-RELATED 1 46 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01787 Cma18g00741 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00764 Cma-Chr13:6619863 Cma18g00741 Cma-Chr18:6679052 1.34E-133 dispersed
Cma18g00200 Cma-Chr18:1079299 Cma18g00741 Cma-Chr18:6679052 1.43E-136 dispersed
Cma18g00737 Cma-Chr18:6654457 Cma18g00741 Cma-Chr18:6679052 1.68E-97 dispersed
Cma18g00738 Cma-Chr18:6662137 Cma18g00741 Cma-Chr18:6679052 2.88E-15 dispersed
Cma18g00739 Cma-Chr18:6664021 Cma18g00741 Cma-Chr18:6679052 4.87E-08 dispersed
Cma18g00741 Cma-Chr18:6679052 Cma18g00744 Cma-Chr18:6690065 1.31E-15 dispersed
Cma18g00743 Cma-Chr18:6688579 Cma18g00741 Cma-Chr18:6679052 1.43E-29 dispersed
Cma18g00740 Cma-Chr18:6668392 Cma18g00741 Cma-Chr18:6679052 7.89E-07 tandem
Cma18g00741 Cma-Chr18:6679052 Cma18g00742 Cma-Chr18:6687410 4.70E-106 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00741 - - cmos:111449354 754.977