Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00744 ATGTCTCTCCTTCATTTCCCTCCATGGCTCTCCCTTATACTCTTTCTCTCTTTACTTTTCATCATCCTTCGACGGAAAGCAGCTGCAAATAGGAAAAAGGGTCACTTTCCCCCAAGCCCACCAAAGCTTCCAATCATAGGAAACTTGCACCAACTTGGCAAGCTCCCACACAAATCCCTATGGCACCTCTCTGAGCTTTACGGTCCCGTTATCAGTCTCAGCCTAGGCCATATAGAAACTATCATTATATCATCTGTCGAGACCGCTCGTGCTCTCTTGAAAACCCATGATCTCGAAAGCTGCAACAAACCACAAACTCATTCTGTCAAAAAACTTACTTACAATTTCCTTGACATTGCGTTTTCACCTTATGGTGATTACTGGCGAGAGATACGCAAAATTTGTGTGATTGAGCTTTTCAGTATGAAGAGAGTGTTATCTTACGAACCTATTAGAGAGCAAGAAGTTCGTTTGCTTATTGAATCAATTTTGCAATCAGCTTCTTATGAAGCTGTTGTTGATCTTACTGAAAAGTCTATTTCTCTCACTACTGGTGTTATTTTTAGAATTGTATTTGGGAAGGAGTTTAAAGGGGATGGATTTCATGAGCTTGTAAGTGAAGCTGAGACCCTATTAGGAAGTTATAGTTTTTCTGAGTTGTTTACTATTCCTTTTGTGGGGAAGATAATTGATTGGTTAAGTGGTCGAGAAGCTAGACTTGAGAGAGTTTTTAATGAGATTAATGCTCTGTTTCAAAAGGCAATTGATGAACATCTTCGTCCCGAGAGATCTAAGCCAGAGCAAAATAATATCATTGATGTGCTTTTAGCTCTGAGTAAAAAGCAAGCTGAATCTTATCCTGTTGTCATTACCCAAGAAAGCATCAAAGCTATTCTTTTGAATATATTTTTGGCCGGATTAGACACAAGTTCAATTACACTAGTTTGGGCAATGGCAGAACTCGTGAAGAACCTAAAAGTGATGAAGAAAGCTCAAGAAGAAATCAGAAACTACGTGGGAAACAGAGGAAAGGTAATAGAGAAAGACACCGAACAACTTCTATATTTGAAAATGATAGTAAAAGAGACATTGAGACTACATCCACCAGCCCCTCTTCTTCTTCCAAGGGAAATCATTTCCCACTTCAAAATTGAAGGCTACGATTTTTACCCAAAAACCATGGTTCAAGTGAACGTTTGGGCAATTGGACGAGACCCCACATACTGGAAAGACCCAGAAGAGTTCCTTCCAGAAAGATTTGAAGAGAGTTCGATTGATTACAAAGGACAACACTTTGAGTTCTTACCATTCGGGGCTGGTCGGAGGATTTGCCCAGGGATGAATTTAGGGGTGAAGACAGTGGAGCTAGCTTTGGCGAATCTTTTGTACCATTTTAATTGGAAGTTGCCGGAGGGAATAAGGGAGGAGGACTTGGACATGGAAGAGACTTCGGGTTTGAGTCTCACCGTCTACAAAAAGTTGCCTCTCAAACTTGTACCAATTTCATACCGTCCATGA 1518 40.58 MSLLHFPPWLSLILFLSLLFIILRRKAAANRKKGHFPPSPPKLPIIGNLHQLGKLPHKSLWHLSELYGPVISLSLGHIETIIISSVETARALLKTHDLESCNKPQTHSVKKLTYNFLDIAFSPYGDYWREIRKICVIELFSMKRVLSYEPIREQEVRLLIESILQSASYEAVVDLTEKSISLTTGVIFRIVFGKEFKGDGFHELVSEAETLLGSYSFSELFTIPFVGKIIDWLSGREARLERVFNEINALFQKAIDEHLRPERSKPEQNNIIDVLLALSKKQAESYPVVITQESIKAILLNIFLAGLDTSSITLVWAMAELVKNLKVMKKAQEEIRNYVGNRGKVIEKDTEQLLYLKMIVKETLRLHPPAPLLLPREIISHFKIEGYDFYPKTMVQVNVWAIGRDPTYWKDPEEFLPERFEESSIDYKGQHFEFLPFGAGRRICPGMNLGVKTVELALANLLYHFNWKLPEGIREEDLDMEETSGLSLTVYKKLPLKLVPISYRP 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6690065 6692140 - CmaCh18G007440.1 Cma18g00744 314082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00744 505 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PANTHER CYTOCHROME P450 71B11-RELATED 19 502 - -
Cma18g00744 505 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 Pfam Cytochrome P450 37 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Cma18g00744 505 Gene3D Cytochrome P450 21 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g00744 505 PANTHER CYTOCHROME P450 19 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00741 Cma-Chr18:6679052 Cma18g00744 Cma-Chr18:6690065 1.31E-15 dispersed
Cma18g00744 Cma-Chr18:6690065 Cma18g00748 Cma-Chr18:6718521 0 dispersed
Cma18g00743 Cma-Chr18:6688579 Cma18g00744 Cma-Chr18:6690065 4.51E-32 tandem
Cma18g00744 Cma-Chr18:6690065 Cma18g00745 Cma-Chr18:6696086 2.36E-57 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00744 - K01773 cmos:111449354 764.992