Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00785 ATGAAACCTCAAGATTTCTTCTTCTTGATCCGATTTCTTCTGATTCTCTTGTTTCGTTTTGTTATTCAGTCCGCGGCTGATCCGAGAGCGACGGAGGTGGCTCTCATATGTTCGAACAACACCGCTTCGCCGCTGGAGCGATCGACCTTCGTGACGAATTTCTTGGCGACGATGGATGCGGTTACTCCTCTTATTGCTTCACAGCGATTTGCAAACGTTGTGAACGGGACTGGAAATACGACGGTTTATGCGTTTGGTCAGTGTATGAATGATCTTACTCAATCGGACTGCGATCTCTGTTTCGCGCAGATGAAAACTCAGATCCTGCGGTGTCTTCCCTTTCAGCTTGCTACTCGCGGAGGCAGACTGTTCTATGATGGATGCTATGTTAGGTATGATTATTATAATTTCTTCAATGAATCTTTGAGTGCTGTGGATAGGCCTGTATGTGGGAAGGTGGATTATAGAGGGAATCGGACTATTTTTAGTGAAAACGCTATGAAATTAGCGAGGAATTTAAGTGTAGTAGCGCCCAAGAACGATGGATTTGCTGTAGGATTGGTGGATTTTAGGAATGTCTCGGTTTATGGATTGGCTCAGTGTTGGAAATTTGTGAGAGGGGATTCTTGCTCGAAGTGTTTGGCTGATGCAGCTAAGGAAATTGCTACCTGTCCTCCAAAAGCCGATGGAAGGGTGCTGAATGCTGGCTGCTTCTTCAGATATTCAACTGAACGATTCTATTTCAACAGCACGGCGACCGCCACTGGAGGAAATGGAAGGAGTCGTCTAGCGATAATTTTGGCTTCGGTATCGGCTGCTGTGGCTGCTGCATTGATTTTTGCAACGGCTGTTTTCTGTGCCAGAAGGAAAGTAGTGAGGAAGCGCAGAGAGAAAAAGCAACTTGGTCCTCTTGTGGCTCTTGTTAACAAGTCCAAGCTTAATTTTTCATACGAGACCCTTGAGAGGGCCACTAATTACTTCGACCAATCCAATAAACTTGGACAAGGAGGCTCTGGTTCAGTTTATAAGGGAACTCTGTCAGATGGTCGAGTCGTAGCAATCAAGAGGCTGTTCTTCAACACGAGACAATGGGTGGATCATTTCTTTAATGAAGTAAACTTGATAAGTGGCATCCGACACAAAAATCTTGTCGGGCTGTTGGGATGCAGTATTACTGGTCCTGAAAGCCTCCTTGTTTATGAATATGTGCCAAATCAAAGCCTGCACGATTACCTTTTTGGTAACAAGAACGTGCAGCCACTGAGTTGGGCATCCAGGTTTAAGATCGTGTTGGGCACAGCTGAAGGCTTGGCTTATCTTCATGAGGAGTCAGAGTTGAAAATCATTCATCGGGACATAAAATTAAGCAATATTCTACTGGACAATGATTTCACTCCAAAGATTGCTGATTTTGGACTTGCTAGAATGCTTCCTGAAGATAAGACACACATTAGCACTGCAATTGCTGGCACACTAGGTTACATGGCTCCGGAGTATGTAGTACGTGGCAAGTTGTCTGAAAAGGCCGATGTTTACAGTTTCGGAGTTTTTGCCATTGAAGTTATCACAGGAAGGAGGAATGGTCACTTCTATCAAGATTCAACCTCCATCTTACAAAGGGTATGGAATTTTTATGGAGAGGGAAGGCTATATGCAGCTGTCGATCCTATCCTTGGAGGCGATTATCCACGAGACCAAGCGTCGTGGTTGCTTCAAATAGGTCTAGTTTGTGTGCAAGCCTTTGCTGATCTAAGGCCATCCATGTCAATGGTTGTGAAAATGCTTAATGGAAACTATGAGATTCCCCAGCCAAAACAGCCTCCATATCTTCATCCTTCAAGCGGAGACATAAAAAAACACAATTCATCAGACTCATCCAATCCCAATCTCTACTCCAACTCGAAAAATTCACAAACTAGCATGACTCAAAGCATCATCGATCCTAGATGA 1950 44.31 MKPQDFFFLIRFLLILLFRFVIQSAADPRATEVALICSNNTASPLERSTFVTNFLATMDAVTPLIASQRFANVVNGTGNTTVYAFGQCMNDLTQSDCDLCFAQMKTQILRCLPFQLATRGGRLFYDGCYVRYDYYNFFNESLSAVDRPVCGKVDYRGNRTIFSENAMKLARNLSVVAPKNDGFAVGLVDFRNVSVYGLAQCWKFVRGDSCSKCLADAAKEIATCPPKADGRVLNAGCFFRYSTERFYFNSTATATGGNGRSRLAIILASVSAAVAAALIFATAVFCARRKVVRKRREKKQLGPLVALVNKSKLNFSYETLERATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAIKRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLFGNKNVQPLSWASRFKIVLGTAEGLAYLHEESELKIIHRDIKLSNILLDNDFTPKIADFGLARMLPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADVYSFGVFAIEVITGRRNGHFYQDSTSILQRVWNFYGEGRLYAAVDPILGGDYPRDQASWLLQIGLVCVQAFADLRPSMSMVVKMLNGNYEIPQPKQPPYLHPSSGDIKKHNSSDSSNPNLYSNSKNSQTSMTQSIIDPR 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6945003 6949067 + CmaCh18G007850.1 Cma18g00785 314123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00785 649 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Cma18g00785 649 ProSiteProfiles Gnk2-homologous domain profile. 143 246 IPR002902 -
Cma18g00785 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 20 624 - -
Cma18g00785 649 SUPERFAMILY Protein kinase-like (PK-like) 313 627 IPR011009 -
Cma18g00785 649 ProSiteProfiles Gnk2-homologous domain profile. 31 137 IPR002902 -
Cma18g00785 649 CDD STKc_IRAK 333 597 - -
Cma18g00785 649 Gene3D - 30 137 IPR038408 -
Cma18g00785 649 Gene3D - 147 246 IPR038408 -
Cma18g00785 649 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 624 - -
Cma18g00785 649 MobiDBLite consensus disorder prediction 603 649 - -
Cma18g00785 649 SMART serkin_6 327 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma18g00785 649 MobiDBLite consensus disorder prediction 619 649 - -
Cma18g00785 649 Gene3D Transferase(Phosphotransferase) domain 1 403 605 - -
Cma18g00785 649 Gene3D Phosphorylase Kinase; domain 1 286 402 - -
Cma18g00785 649 ProSiteProfiles Protein kinase domain profile. 327 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma18g00785 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Cma18g00785 649 Pfam Protein kinase domain 328 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma18g00785 649 Pfam Salt stress response/antifungal 37 133 IPR002902 -
Cma18g00785 649 Pfam Salt stress response/antifungal 155 243 IPR002902 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma05g00032 Cma18g00785 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00785 Cma-Chr18:6945003 Cma13g00711 Cma-Chr13:6409064 1.66E-95 dispersed
Cma14g00663 Cma-Chr14:3324305 Cma18g00785 Cma-Chr18:6945003 0 transposed
Cma12g00028 Cma-Chr12:105679 Cma18g00785 Cma-Chr18:6945003 1.07E-142 wgd
Cma18g00785 Cma-Chr18:6945003 Cma05g00032 Cma-Chr5:148546 1.80E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69301 PF00069 Pkinase 7.90E-44 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00785 - - csv:101218749 1131.32