Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00910 ATGGTCGCCGCCGGTCAGGGAGGCGACGGAGCACTCTCCGGCGGCTCCAACATCAGAACCATCGCCGTCCGCATCATCACAGGGCGGTGGTTTGTGGTGTTCGCTTCACTTCTAATCATGGCGGCCGCCGGCGCCACTTACATGTTCAGCCTATATTCCAACGACATAAAGTCGGTTTTAGGTTACGACCAAACGACGTTGAATTTGCTGAGCTTTTTCAAGGATTTGGGTGCAAACGTCGGCATTTTATCTGGCCTTATCAATGAAGTTACGCCGCCGTGGGTGGTTCTATCCATCGGCGCTGTCCTGAATTTCTTTGGTTATTTCATGATTTGGCTCGCCGTTACTAAGCGGATCTCGACGCCGAAAATTTGGCAAATGTGTCTCTATATTTGTGTTGGCGCTAATTCTCAATCATTTGCTAATACCGGTTCGCTCGTTACTTGTGTCAAGAACTTTCCAGAAAGTCGAGGCGTCGTTCTTGGTATCTTAAAGGGGTATGTCGGGCTGAGCGGCGCCATAATTACGCAGCTCTTCCACGCATTCTACGGCTCCGACACCAAATCCTTAATACTCCTAATCGGATGGCTTCCGGCGGCCATATCCTTCGCATTTTTACGAACAATTCGGATCCTTAATACTCCTAATCGGATGGCTTCCGGCGGCCATATCCTTCGCATTTTTACGAACAATTCGGATCATGAAACGCCGCCGTCGTTCTCCTCCTCCTCTTCCTCCCTCTCGCCGTCGTCATCGTCGAAGAATACAACCTCTCTAAACTCAAATCCGCCGCCATTAATCCCCCAAACCCACTTCAAATCCTTACAGAGAAACCCAATCCCCCAAAAACAGAGCCCCAAAATTAATCCCCCAAACCCACTTCAAATCCTTACAGAGAAACCCAATCCCCCAAAAACAGAGCCCCAAAAACAAACCCGACAACAAAAACAACCATCTTGCTGGACAACAATCTTCAACCCGCCGGAACGCGGCGAGGATTTCACAATTCTTCAAGCTCTGTTCAGTATGGACATGGCGATTCTGTTCTTCTCTGCAATTTGTGGCGTCGGCGGAACTTTGACGGCGATTGACAATCTGGGTCAGATCGGAATGTCATTAGGATACCCAAAAAGAAGCATTAGCACATTCGTGACACTCGTTAGTATATGGAATTACCTCGGACGTGTCGCCTCTGGTTTTGTCTCTGAAATTGTTCTAACAAAATACAAATTCCCACGTCCTTTAATGCTTTCTTTAACGCTTCTTTTGTCATGTGTCGGTCATTTGATCATCGCCTTCGCCGTTCCAAATGGGCTTTATGTAGCTTCAATCGTGATCGGATTCTGTTTCGGAGCGCAGTGGCCGTTGCTTTTCGCCATAATTTCCGAGCTATTTGGGTTGAAATATTACTCTACGCTTTACAATTTCGGGTCGGTGGCTAGTCCGATTGGATTATACGTTTTGAATGTGAAAGTGGCCGGGAATTTGTATGACAAAGAGGCGGCGAAGCAGCTGGCGGCCAAAGGGCTTGTGAGAAAAACAGGGGAGGAGCTGAAATGCTACGGCGGAGAGTGTTTTAAGCGGTCGTTTCTTGTGATTACCGGAGTTACTTTGTTGGGTATGTTTGTTTCGTTGATTTTAGTGATTAGGACGAGGGGTTTTTACAAGAGTGATATTTATAAGAAGTTTCGAGATGAAGCTGAAGCAGAGGTGGTCGGAAATGGCGCTGTGGTGGCCACCGGAGCGCCGGAGGAGACAAGGAACCGATAG 1770 48.02 MVAAGQGGDGALSGGSNIRTIAVRIITGRWFVVFASLLIMAAAGATYMFSLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGILSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTKRISTPKIWQMCLYICVGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGSDTKSLILLIGWLPAAISFAFLRTIRILNTPNRMASGGHILRIFTNNSDHETPPSFSSSSSSLSPSSSSKNTTSLNSNPPPLIPQTHFKSLQRNPIPQKQSPKINPPNPLQILTEKPNPPKTEPQKQTRQQKQPSCWTTIFNPPERGEDFTILQALFSMDMAILFFSAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFVSEIVLTKYKFPRPLMLSLTLLLSCVGHLIIAFAVPNGLYVASIVIGFCFGAQWPLLFAIISELFGLKYYSTLYNFGSVASPIGLYVLNVKVAGNLYDKEAAKQLAAKGLVRKTGEELKCYGGECFKRSFLVITGVTLLGMFVSLILVIRTRGFYKSDIYKKFRDEAEAEVVGNGAVVATGAPEETRNR 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7807517 7810291 + CmaCh18G009100.1 Cma18g00910 314248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00910 589 MobiDBLite consensus disorder prediction 235 283 - -
Cma18g00910 589 Pfam Nodulin-like 29 217 IPR010658 -
Cma18g00910 589 SUPERFAMILY MFS general substrate transporter 29 558 IPR036259 -
Cma18g00910 589 CDD MFS_Mch1p_like 28 541 - -
Cma18g00910 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 292 572 - -
Cma18g00910 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 215 - -
Cma18g00910 589 MobiDBLite consensus disorder prediction 302 319 - -
Cma18g00910 589 PANTHER MFS TRANSPORTER 292 572 - -
Cma18g00910 589 PANTHER MFS TRANSPORTER 15 215 - -
Cma18g00910 589 MobiDBLite consensus disorder prediction 235 319 - -
Cma18g00910 589 Gene3D MFS general substrate transporter like domains 295 506 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g00910 Cma-Chr18:7807517 Cma13g00216 Cma-Chr13:1712926 4.80E-173 dispersed
Cma18g00910 Cma-Chr18:7807517 Cma04g01389 Cma-Chr4:7099324 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00910 - - csv:101204293 820.461