Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00955 ATGAGCAGTAGCATTGATCGACGGGGAGTTGAGGAAGACGAAGCGAGGTCGATGATGGGGGTGCCTGCAACTCTGGGCGATGATTTTCTGCGAGAAAGAGCGGCGAAGATGAGAGAATCTCTGCAAAAGAGCCAAACTATTACCGATAACGTCGTCTCGATTCTCGGCTCCTTTGACCACCGTCTTTCTGCTCTCGAAACCGCCATGCGCCCTACTCAGATCAGAACCAATTCTATTCGTAAAGCTCACGAGAACATTGATAAGACTTTGAAGGCTGCGGAGGTCATTTTAGCACAGTTTGATCTCTCTCGCCAGGCAGAAATGAAAATTCTCAAAGGGCCTCATGAGGATTTGGAGAGTTATCTCGGGTCAATCGGTCAGTTAAGAAACATTATTAAATTCTTTAGCAGCCAGAAAGGTTTTAAGAGTAGTGAGGTAGTGCTGAATCATGCAAATAATCTGCTTGCAAAAGCCATCTCAAAGCTTGAAGATGAGTTTAGGCAGCTATTATCTTCATACAGCAAACCTGTGGAGCCTGAGCGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGACTCTCCTGGTCATCATGATGATTCAAATGGAAAGAATCCCTCCTCAAATCACCATGCTGCACATCATGATAATAGCTTGGAGACTGCTGTCTTCACACCTCCCACTCTCATACCTCCTCGTGTTCTACCACTGCTACACGAGTTATCGCAGCAGATGGTTCAAGCTGGTCATCAGCAGCAAATTCTAAAAGTCTATAGGGATACCCGTTCAGTCGTTTTGGAAGAAAGCCTACGGAAATTGGGAGTTGAAAAACTTAGCAAAGAGGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCCAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTACTGTTTGCTGGAGAACGACAAGTGTGCGATCAAATATTTGAAGGCTTCGAATCGCTTAGAGATCAATCCTTTGCTGAGGTTACAAGTAGTAGTGTGTCTGTGCTCTTCAGTTTTGGGGAGGCAATTGCTAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGATATGTACGAAATAATGCGAGAGCTGCACTCAGAGATTGAGACAATTTTTAAGGGTGAAGCGTGCAATGAGATCAGGGAATCTGCATCGGGTTTGACCAAACGACTTGCACAGACAGCCAAGGATACATTCGGTGATTTTGAGGAAGCCGTTGAAAAAGATGCCACAAAAACTGCAGTGTTGGATGGAACAGTTCATCCTCTAACAAGCTACGTGATTAATTATGTCAAATTTCTTTTTGACTATCAGGCAACCTTGAAGCAGCTTTTCCAAGAATTTGCATGTAGCGGTCAAACGAGCTCGGAATTGGCGTCTGTCACAATGCAAATAATGCAGGCCCTTCAATCTAATTTGGACGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCACTTGTTCCTTATGAACAACATTCATTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTTGGGGACGATTGGGTTCAGCGACATAGGAGGGTTGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGTCTTTCTGTTCAAGGCTTAACTTCATCTGGAGGTGGCAGCATACCTGGTATAGATGGGGGAAACAGTAGCGGAGTTTCTAGGGCGCTTATTAAAGACAGGTTCAAGACTTTCAACATGCAATTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACCGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTAAAGCGTTTCGGGCCACTAGTTGATGGTGGAAAGAATCCCCAAAAGTATGTTAGATACCAACCAGAGGATCTCGAGAGGATGCTCGGAGAATTTTTCGAGGGGAAGAACATGAGCGAACCTAAGCGGTAG 2016 44.1 MSSSIDRRGVEEDEARSMMGVPATLGDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKAAEVILAQFDLSRQAEMKILKGPHEDLESYLGSIGQLRNIIKFFSSQKGFKSSEVVLNHANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSDSPGHHDDSNGKNPSSNHHAAHHDNSLETAVFTPPTLIPPRVLPLLHELSQQMVQAGHQQQILKVYRDTRSVVLEESLRKLGVEKLSKEDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERQVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGEACNEIRESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFACSGQTSSELASVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSIPGIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLVDGGKNPQKYVRYQPEDLERMLGEFFEGKNMSEPKR 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8137003 8144640 - CmaCh18G009550.1 Cma18g00955 314293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00955 671 Pfam Exo70 exocyst complex subunit 299 658 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cma18g00955 671 MobiDBLite consensus disorder prediction 186 217 - -
Cma18g00955 671 MobiDBLite consensus disorder prediction 199 217 - -
Cma18g00955 671 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 54 667 - -
Cma18g00955 671 Gene3D Exocyst complex component Exo70 94 671 - -
Cma18g00955 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 667 IPR004140 GO:0000145|GO:0006887
Cma18g00955 671 SUPERFAMILY Cullin repeat-like 96 662 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00826 Cma-Chr7:3822878 Cma18g00955 Cma-Chr18:8137003 0 dispersed
Cma18g00955 Cma-Chr18:8137003 Cma10g00065 Cma-Chr10:249523 1.16E-115 dispersed
Cma18g00955 Cma-Chr18:8137003 Cma04g01443 Cma-Chr4:7345848 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00955 K07195 - csv:101206262 1179.47