Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma18g01034 | ATGCCTACCATTAACCTAGGCCAGATTCCAAGTTTCGAAGAACATGTTAATGGCTTTGATCAACATGATATGTTGGTTGAGGAGATTGAAGGTCTCATTAGAGTTTACGGAAATGGGTATGTGGAAAGAGCACAGATAGTTCCCTGTGTCTCTAATGCATTGCCGCCAGAGCTCGGTGTCACTTCTTGGGATGTAGTTGTGAATAAGCTGAGTAACATTTGGGCTCGTTTCTATATCCCAAAACAGTGCCAGGGGAAACTTCCTTTGCTTGTCTATTTCCATGGAGGCGGATTTTGTGTTGGCTCGGCAGCTTGGAGCTGCTACCATGAGTTCCTTGCCAAGGTATCTGCAAAAGCTGAGTGTATAATTATGTCTGTGAATTATCGTTTGGCACCAGAAAACCCTCTTCCAGCTCCTTATGAAGATGGATTAAAGACCATTTCATGGTTGAAACAAGTTGCTCTTATAGGGGGCAAGCAGAATTGGTGGTCAAGATACTGTGACTTTACCAGAATCTACCTTGGTGGTGATAGTGCGGGTGGCAACATAGCCTTCAATGTAGCCGCCAGACTTGGTGGTAAGACAACTGCTTCTGGAGCTGTGGTCTTGAAGCCGTTGGTTATTAGAGGTAACATTTTGATACAACCATTTTTTGGTGGGGAGTCAAGGACCAAATCAGAGAAGTTTCTGGTCCAACCTCCTCGTTCGGCACTGACGATGGCGGTTTCCGATACATACTGGCGGTTGGCATTGCCGTTTGGGGCAAACCGTGACCACCCATGGTGTAATCCTTCGGCAAAAGGGTTGTTTAAGGTGGAGAATTTGAGGGTTTTGCCTAGTTTGGTATGTATATCGGAATTGGACATATTGAAAGATAGGAACTTGGAGTTTTGCTCTGCTTTACATAGAGAGGGTAAGCTGATCAATTATGTGGTTCATGAAGGAGTTGGCCATGCGTTTCAGGTTCTGAACAAATCACAACTCTCACAGACTCGGACTCTTGAAATGATTGGTCATATCAAGGATTTCTTATGTGTATAG | 1041 | 44.48 | MPTINLGQIPSFEEHVNGFDQHDMLVEEIEGLIRVYGNGYVERAQIVPCVSNALPPELGVTSWDVVVNKLSNIWARFYIPKQCQGKLPLLVYFHGGGFCVGSAAWSCYHEFLAKVSAKAECIIMSVNYRLAPENPLPAPYEDGLKTISWLKQVALIGGKQNWWSRYCDFTRIYLGGDSAGGNIAFNVAARLGGKTTASGAVVLKPLVIRGNILIQPFFGGESRTKSEKFLVQPPRSALTMAVSDTYWRLALPFGANRDHPWCNPSAKGLFKVENLRVLPSLVCISELDILKDRNLEFCSALHREGKLINYVVHEGVGHAFQVLNKSQLSQTRTLEMIGHIKDFLCV | 346 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 8611600 | 8612640 | - | CmaCh18G010340.1 | Cma18g01034 | 314372 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma18g01034 | 346 | Pfam | alpha/beta hydrolase fold | 90 | 321 | IPR013094 | GO:0016787 | |
| Cma18g01034 | 346 | SUPERFAMILY | alpha/beta-Hydrolases | 26 | 344 | IPR029058 | - | |
| Cma18g01034 | 346 | PANTHER | CARBOXYLESTERASE 6-RELATED | 15 | 344 | - | - | |
| Cma18g01034 | 346 | Gene3D | alpha/beta hydrolase | 32 | 345 | IPR029058 | - | |
| Cma18g01034 | 346 | PANTHER | ARYLACETAMIDE DEACETYLASE | 15 | 344 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma01g00440 | Cma-Chr1:2210879 | Cma18g01034 | Cma-Chr18:8611600 | 5.12E-129 | dispersed | |
| Cma18g01034 | Cma-Chr18:8611600 | Cma04g03020 | Cma-Chr4:19715716 | 5.40E-49 | dispersed | |
| Cma02g01197 | Cma-Chr2:7076611 | Cma18g01034 | Cma-Chr18:8611600 | 5.67E-61 | transposed | |
| Cma05g00468 | Cma-Chr5:2160476 | Cma18g01034 | Cma-Chr18:8611600 | 9.69E-58 | transposed | |
| Cma07g00818 | Cma-Chr7:3790647 | Cma18g01034 | Cma-Chr18:8611600 | 1.84E-57 | transposed | |
| Cma18g01034 | Cma-Chr18:8611600 | Cma04g01528 | Cma-Chr4:7735895 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma18g01034 | - | - | csv:101213887 | 659.833 |