Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma18g01072 | ATGGGTATCTCAAATCTCTCCCCTTGCCTCGTTTATGGGCTGATGGGGCTTTGTGCTTTCTTGTCTGTGAGCCACAGCTTGACGTTGGATTACTATGCCAAAACTTGTCCCACTGTGTTGCAGGTTGTGAGGAAAGAGATGGAGTGTGCAGTGCTTTCTGACCCACGCAATGCAGCTTTTGTTGTCCGCTTGCACTTCCATGACTGCTTTGTTCAGGGGTGTGACGGGTCGGTTCTGCTGGACGACACGATAACGTTGCAGGGAGAGAAAAAGGCTTCCACCAACATTCACTCCTTGAAAGGCTTTAGAATCATTGACAGGATAAAGAATAGCCTTGAATCTGAATGTCCAGGGATTGTTTCTTGTGCAGACATACTCACTATTGCAGCCAGGGATGCAGTGATTCTGGTGGGCGGTCCTTACTGGGAGATTCCTCTTGGAAGAATGGATTCCACAACTGCGGGTTATGAACTAGCAGACGCAAATCTTCCCTCTGCCAATGAGGGACTTCTGAGTATCATCTCCAAGTTTCTTTATCAGGGTCTCTCTGTCACTGACATGGTAGCTCTATCAGGAGCGCACACGATCGGGATGGCAAGGTGCGAGAATTTCAGGGAAAGGATTTACGGGGATTTTGAAGCAACTTCCAACGACGGTAACAACCCGATCTCGAAGTCGTATCTTGACAAGTTGAGATCCATCTGCCCCCCAGTTGGTAAAGCTGCAGAGAACAACATAACAGCAATGGACAATGTGACACCAGAGGTGTTTGACAACTCCTATTTCCACATGCTGATGAGAGAAGAAGGGCTTATGAATTCAGACCAGGAACTGTATTCAAGCCTTCTTGGCATGGAAACAAGAGCACTGGTTAAGAAATATGCTGCTGAACCACTTGCTTTCTTTCAGCAATTCTCTGATTCCATGGTGAAGTTGGGGAATATCACTAACTATGATAGCTATTTCACTGGGGAAGTTAGAACAAACTGCAGATTCTCTGGAATTCGCACTTCCCAAAACTCAAATAAAGGAGAAAGAAGAAACCAGAGGCAAAGGGAATCACTATATAACCGACCTTACAATGATGGAAATGGGCAGCCATCTAAGCTGCGGCTGTGCTCATTTGTGACCCATTGTGATCACAAAACTCCCTCTCAATCGCAGCTCAGTTTAATGGCTCAAGATCATTCTGGTTCTGAATCTCATCAGAAACGGGCAGGTCTATTGAAAGATCAAGTGAGATTGGTTAAGAGAAAGGATTCGGATCGCTATGAAATTGTTTCAATCCAAGATCCTTTGTCATTTGAGAAAGGGTTCTTCATAGTTATTCGTGCCTGCCAGCTGCTAGCACAGAAGAATGAAGGAATAATATTGGTTGGTTTAGCTGGTCCTTCTGGGGCTGGAAAAACAGTTTTCACAGAAAAGATAATGAACTTTATGCCCAGTATTGCTATCATATCAATGGATGATTATAATGATGCAAGTCGAATTGTCGATGGCAACTTTGATGATCCACGCTTAACTGACTACGACACTTTGCTCCAGAATGTCCAAGATCTAAAAGCAGGGAAGCAAGTTCAAGTCCCTATTTATGATTTCAAATCTAGTTCCAGAATTGGATACAGGACAGTTGAGGCTCCAAGCTCAAGGATTGTGATCATCGAGGGAATTTATGCATTAAATGAAAGATTGCGGCCCCTGTTGGACCTTCGAGTTTCTGTTAGAGGTGGAGTTCACTTTGACCTTGTGAAACGGGTGTTACGTGACATCCAACGTGCTGGCCAAGAACCAGAAGAAATTATTCATCAAATTTCTGAAACAGTGTATCCAATGTACAAGGCTTTTATTGAACCAGATCTTGAAACTGCGCATATAAAAATCATCAACAAATTCAATCCCTTTACAGGATTTCAAAGTCCCACTTACATATTGAAGTCAGCAAGAAAGATAACAGTGGATCAAATTAAGTCTGTATTATCTGAAGATCATACAGAAAATTTGGAGCAGACATACGACATATATCTGTTGCCACCAGGTGAAGATCCCGAGTCTTGTCAATCGTATCTAAGGATGCGCAACAAAGAAGGAAAATACAGTCTCATGTTTGAGGAATGGGTTACCGACAATCCATTTATCATATCTCCGAGAATAACTTTCGAGGTCAGTGTGCGCCTTCTTGGTGGACTGATGGCCTTAGGATACACAATAGCAACAATTCTTAAAAGAAAGAGCCATGTATTCTCAGATCACAGAGTGTGTGTCAAAATTGATTGGCTGGAACAATTAAATCGCCAGAACGTTCAGGTACAAGGTAAAGATCGGCTAGTCGTAAAACATGTAGCGGAGCAGCTTGGCTTGGATGGTTCCTACATTCCTCGTACCTACATTGAACAGATTCAACTGGAGAAGCTTGTAAATGAAGTCATGGCCTTGCCAGATGATTTGAAGTCTAAACTCAGTCTTGACGAGGATCTAGTTTCAAGCCCCATTGAAGCACTCTCTAGAGCCTCTGCTGATAGAGTTTCCTTGAGAAATAGAAATCTCAAAAGTGGCATATCTCAGTCATATACAACCCAAAGGGAGAAAAATCTGACTGGATATGCTTCCAACAACCAAAGATTTGTCGACAGCAACACGGAGTCTTCGGCAATGCTTGCGAACCAGGGAGCCATTACTCAGCTTTCTGAACAAATTTCATCACTCAATGATCGAATGGACGAGTTTACAACTCGAATCGAGGAGTTGAATTCAAAGTTGAGCTTCAAGACGAATTCTCCAAGCCACCACAACCTGAATCTCCAAGCGGAAACATGCAACGGTTCTGTGCCGACTTCTTGTTTCGTCTCTGGATTGGGTAATGGCTCCTTGACTGGTTGCATTATACCCAATTCTTCATCCTTCTCCCAGTTGGCCAAGGATTCTCCTTTAATGGATGAGATATCAGGAATCGTGAGGGGGCAACGACAAGTTATGCACCAATTAGATTGCCTTAGCAATCTTCTTCGGGAACGTGATAGCGCGGGGGAACGATCCCGTCAAGTAAGAACAAAGAAGAAAACCATAATACCTGATCCCGAGCCGCTAAGACTTCCTCTCTTGTTGACTGTAGCTGTGGGAGGTGTAGGAATTTTGTTGTACAAGAGCTTAAGTCGTAATTGA | 3159 | 43.53 | MGISNLSPCLVYGLMGLCAFLSVSHSLTLDYYAKTCPTVLQVVRKEMECAVLSDPRNAAFVVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASTNIHSLKGFRIIDRIKNSLESECPGIVSCADILTIAARDAVILVGGPYWEIPLGRMDSTTAGYELADANLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRERIYGDFEATSNDGNNPISKSYLDKLRSICPPVGKAAENNITAMDNVTPEVFDNSYFHMLMREEGLMNSDQELYSSLLGMETRALVKKYAAEPLAFFQQFSDSMVKLGNITNYDSYFTGEVRTNCRFSGIRTSQNSNKGERRNQRQRESLYNRPYNDGNGQPSKLRLCSFVTHCDHKTPSQSQLSLMAQDHSGSESHQKRAGLLKDQVRLVKRKDSDRYEIVSIQDPLSFEKGFFIVIRACQLLAQKNEGIILVGLAGPSGAGKTVFTEKIMNFMPSIAIISMDDYNDASRIVDGNFDDPRLTDYDTLLQNVQDLKAGKQVQVPIYDFKSSSRIGYRTVEAPSSRIVIIEGIYALNERLRPLLDLRVSVRGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLETAHIKIINKFNPFTGFQSPTYILKSARKITVDQIKSVLSEDHTENLEQTYDIYLLPPGEDPESCQSYLRMRNKEGKYSLMFEEWVTDNPFIISPRITFEVSVRLLGGLMALGYTIATILKRKSHVFSDHRVCVKIDWLEQLNRQNVQVQGKDRLVVKHVAEQLGLDGSYIPRTYIEQIQLEKLVNEVMALPDDLKSKLSLDEDLVSSPIEALSRASADRVSLRNRNLKSGISQSYTTQREKNLTGYASNNQRFVDSNTESSAMLANQGAITQLSEQISSLNDRMDEFTTRIEELNSKLSFKTNSPSHHNLNLQAETCNGSVPTSCFVSGLGNGSLTGCIIPNSSSFSQLAKDSPLMDEISGIVRGQRQVMHQLDCLSNLLRERDSAGERSRQVRTKKKTIIPDPEPLRLPLLLTVAVGGVGILLYKSLSRN | 1052 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 8867931 | 8881802 | - | CmaCh18G010720.1 | Cma18g01072 | 314410 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma18g01072 | 1052 | PRINTS | Plant peroxidase signature | 307 | 320 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Plant peroxidase signature | 248 | 263 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Plant peroxidase signature | 119 | 129 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Plant peroxidase signature | 36 | 55 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Plant peroxidase signature | 264 | 281 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Plant peroxidase signature | 60 | 80 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Plant peroxidase signature | 138 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 422 | 627 | IPR027417 | - | |
Cma18g01072 | 1052 | PANTHER | PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN | 389 | 1025 | - | - | |
Cma18g01072 | 1052 | ProSiteProfiles | CYTH domain profile. | 643 | 801 | IPR023577 | - | |
Cma18g01072 | 1052 | PANTHER | URIDINE KINASE | 389 | 1025 | - | - | |
Cma18g01072 | 1052 | Gene3D | Peroxidase, domain 2 | 164 | 312 | - | - | |
Cma18g01072 | 1052 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Cma18g01072 | 1052 | Gene3D | - | 30 | 332 | - | - | |
Cma18g01072 | 1052 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 332 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | Gene3D | - | 457 | 659 | IPR027417 | - | |
Cma18g01072 | 1052 | PRINTS | Haem peroxidase superfamily signature | 58 | 72 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Haem peroxidase superfamily signature | 120 | 137 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Haem peroxidase superfamily signature | 250 | 265 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | PRINTS | Haem peroxidase superfamily signature | 138 | 150 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | ProSiteProfiles | Plant heme peroxidase family profile. | 26 | 334 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | Pfam | Peroxidase | 43 | 296 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01072 | 1052 | Coils | Coil | 891 | 918 | - | - | |
Cma18g01072 | 1052 | ProSitePatterns | Peroxidases active site signature. | 58 | 69 | IPR019794 | GO:0004601 | |
Cma18g01072 | 1052 | MobiDBLite | consensus disorder prediction | 333 | 365 | - | - | |
Cma18g01072 | 1052 | Pfam | CYTH domain | 660 | 795 | IPR023577 | - | |
Cma18g01072 | 1052 | SUPERFAMILY | CYTH-like phosphatases | 651 | 798 | IPR033469 | - | |
Cma18g01072 | 1052 | CDD | secretory_peroxidase | 27 | 332 | IPR033905 | GO:0004601|GO:0042744 | |
Cma18g01072 | 1052 | CDD | UMPK_like | 458 | 630 | - | - | |
Cma18g01072 | 1052 | Pfam | Phosphoribulokinase / Uridine kinase family | 459 | 627 | IPR006083 | GO:0005524|GO:0016301 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01493 | Cma-Chr11:9822021 | Cma18g01072 | Cma-Chr18:8867931 | 1.82E-15 | dispersed | |
Cma18g01072 | Cma-Chr18:8867931 | Cma03g00716 | Cma-Chr3:5790882 | 1.37E-85 | dispersed | |
Cma04g01562 | Cma-Chr4:7939483 | Cma18g01072 | Cma-Chr18:8867931 | 0 | transposed | |
Cma10g00269 | Cma-Chr10:1195804 | Cma18g01072 | Cma-Chr18:8867931 | 0 | wgd | |
Cma11g00239 | Cma-Chr11:1218814 | Cma18g01072 | Cma-Chr18:8867931 | 0 | wgd | |
Cma18g01072 | Cma-Chr18:8867931 | Cma04g01561 | Cma-Chr4:7931748 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma18g01072 | K00876 | - | csv:101208611 | 1198.34 |