Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g01091 ATGAGAGAATGCTTCATAGAGATCATAAGGACAAGAGAAGAGAAGTTGATGAATGGGGAAGCAGAAGGGTATGGGAATGACTTCTTGGGATTGCTGGTGAAGGCGAAGAACGAGCCTGAAAAAGCACAGAGGTTGTCTGTGGATGATATTGTGGATGAATGTAAGACGTTTTACTTTGCTGGGCATGAGACCACCAATGCGTTGCTGGCTTGGACTATGTTTCTGTTGGCGTTGCATAGGGAATGGCAAGAGGAAGCAAGGAAGGAAGTCTTCAAGGTTCTTGGTGACAAGAATCCAACAATGGAAAGTCTCCCCAAATTAAGAACGATGAATATGATCATCAATGAATGCCTGAGGCTGTATCCTCCAGCAATGACATTATCACGCCAAGTGCAGAAGGAAACCAGACTGGGGAGCTTGGTGCTTCCGAGTCGAATTCGGGTGCTGATACCGACGCTTGCAGTCCAACACAACACCGAGTTATGGGGAGAAGATGCAGATGTTTTCAAACCAGAAAGATTTGCAGAAGGGGTCGGGAAAGCCACCGAAACGAACTCGGGTGCATATCTCCCCTTCGGGTTGGGGCCTAGAAGCTGCGTCGGGATGAACTTTGCATTGAACGAAGCCAAAATAGCATTGTCCATAATTCTACAACGATTTTCCTTCACCCTTTCACCTTCCTACTCTCACTCCCCTATTCATAAACTAATGCTGCACGGACAGGCTATGCTGTTTTAA 738 46.61 MRECFIEIIRTREEKLMNGEAEGYGNDFLGLLVKAKNEPEKAQRLSVDDIVDECKTFYFAGHETTNALLAWTMFLLALHREWQEEARKEVFKVLGDKNPTMESLPKLRTMNMIINECLRLYPPAMTLSRQVQKETRLGSLVLPSRIRVLIPTLAVQHNTELWGEDADVFKPERFAEGVGKATETNSGAYLPFGLGPRSCVGMNFALNEAKIALSIILQRFSFTLSPSYSHSPIHKLMLHGQAMLF 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8967990 8973782 - CmaCh18G010910.1 Cma18g01091 314429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g01091 245 Gene3D Cytochrome P450 1 244 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 SUPERFAMILY Cytochrome P450 2 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 Pfam Cytochrome P450 7 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 192 201 IPR017972 GO:0005506|GO:0016705
Cma18g01091 245 PRINTS P450 superfamily signature 60 77 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 PRINTS P450 superfamily signature 112 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 PRINTS P450 superfamily signature 199 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 PRINTS P450 superfamily signature 190 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 240 - -
Cma18g01091 245 PANTHER CYTOCHROME 1 240 - -
Cma18g01091 245 PRINTS E-class P450 group I signature 199 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 PRINTS E-class P450 group I signature 152 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 PRINTS E-class P450 group I signature 49 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 PRINTS E-class P450 group I signature 69 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01091 245 PRINTS E-class P450 group I signature 189 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g01091 Cma-Chr18:8967990 Cma09g00688 Cma-Chr9:3245631 2.28E-77 dispersed
Cma18g01091 Cma-Chr18:8967990 Cma18g01093 Cma-Chr18:8977427 1.85E-61 proximal
Cma18g01090 Cma-Chr18:8964506 Cma18g01091 Cma-Chr18:8967990 3.01E-165 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g01091 - - cmax:111474764 471.855