Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma18g01093 | ATGATCATCAACGAATGCCTGAGGCTATATCCACCGGCAATGACGGTGTCGAGGCAGGTGGAGAAAGAGGTGAGGCTGGGTAGGCTCTGTCTTCCAGCCACGCTTCAGCTCACCGTCCCAACCATTGCGGTTCATCACGACAAAGCGTTTTGGGGAGAAGATGCACATGAATTCAAGCCAGAAAGATTTGGTGAAGGGGTGGGGAAAGCCATGGAGAGGAACTCAGCTGGGTATCTGCCATTTGGATTGGGCCCTCGAAGCTGCGTGGGGATGAGCTTTGCAATGAACGAAGCTAAGAGCTCTATGTCAATGATTCTACAGAAGTACTCCTTGGCGCTCTCGCCGGCCTACGCTCACATGCCTGCTCAGTTCCTCACCACTTGCCCCCAGCAGGGACTGCACCTCATTCTCCATTCGGTATCAGATCACAAAGCCTGA | 438 | 53.42 | MIINECLRLYPPAMTVSRQVEKEVRLGRLCLPATLQLTVPTIAVHHDKAFWGEDAHEFKPERFGEGVGKAMERNSAGYLPFGLGPRSCVGMSFAMNEAKSSMSMILQKYSLALSPAYAHMPAQFLTTCPQQGLHLILHSVSDHKA | 145 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 8977427 | 8977864 | - | CmaCh18G010930.1 | Cma18g01093 | 314431 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma18g01093 | 145 | Gene3D | Cytochrome P450 | 1 | 141 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma18g01093 | 145 | PRINTS | E-class P450 group I signature | 88 | 111 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma18g01093 | 145 | PRINTS | E-class P450 group I signature | 41 | 65 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma18g01093 | 145 | PRINTS | E-class P450 group I signature | 78 | 88 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma18g01093 | 145 | Pfam | Cytochrome P450 | 1 | 116 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma18g01093 | 145 | PRINTS | P450 superfamily signature | 79 | 88 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma18g01093 | 145 | PRINTS | P450 superfamily signature | 88 | 99 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma18g01093 | 145 | PRINTS | P450 superfamily signature | 1 | 11 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma18g01093 | 145 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 81 | 90 | IPR017972 | GO:0005506|GO:0016705 | |
Cma18g01093 | 145 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 1 | 136 | - | - | |
Cma18g01093 | 145 | SUPERFAMILY | Cytochrome P450 | 1 | 138 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma18g01093 | 145 | PANTHER | CYTOCHROME P450 CYP749A22-LIKE | 1 | 136 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma18g01093 | Cma-Chr18:8977427 | Cma18g01090 | Cma-Chr18:8964506 | 9.98E-68 | dispersed | |
Cma18g01091 | Cma-Chr18:8967990 | Cma18g01093 | Cma-Chr18:8977427 | 1.85E-61 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma18g01093 | - | - | cmo:103489194 | 239.58 |