Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g01093 ATGATCATCAACGAATGCCTGAGGCTATATCCACCGGCAATGACGGTGTCGAGGCAGGTGGAGAAAGAGGTGAGGCTGGGTAGGCTCTGTCTTCCAGCCACGCTTCAGCTCACCGTCCCAACCATTGCGGTTCATCACGACAAAGCGTTTTGGGGAGAAGATGCACATGAATTCAAGCCAGAAAGATTTGGTGAAGGGGTGGGGAAAGCCATGGAGAGGAACTCAGCTGGGTATCTGCCATTTGGATTGGGCCCTCGAAGCTGCGTGGGGATGAGCTTTGCAATGAACGAAGCTAAGAGCTCTATGTCAATGATTCTACAGAAGTACTCCTTGGCGCTCTCGCCGGCCTACGCTCACATGCCTGCTCAGTTCCTCACCACTTGCCCCCAGCAGGGACTGCACCTCATTCTCCATTCGGTATCAGATCACAAAGCCTGA 438 53.42 MIINECLRLYPPAMTVSRQVEKEVRLGRLCLPATLQLTVPTIAVHHDKAFWGEDAHEFKPERFGEGVGKAMERNSAGYLPFGLGPRSCVGMSFAMNEAKSSMSMILQKYSLALSPAYAHMPAQFLTTCPQQGLHLILHSVSDHKA 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8977427 8977864 - CmaCh18G010930.1 Cma18g01093 314431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g01093 145 Gene3D Cytochrome P450 1 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01093 145 PRINTS E-class P450 group I signature 88 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01093 145 PRINTS E-class P450 group I signature 41 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01093 145 PRINTS E-class P450 group I signature 78 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01093 145 Pfam Cytochrome P450 1 116 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01093 145 PRINTS P450 superfamily signature 79 88 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01093 145 PRINTS P450 superfamily signature 88 99 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01093 145 PRINTS P450 superfamily signature 1 11 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01093 145 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 81 90 IPR017972 GO:0005506|GO:0016705
Cma18g01093 145 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 136 - -
Cma18g01093 145 SUPERFAMILY Cytochrome P450 1 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma18g01093 145 PANTHER CYTOCHROME P450 CYP749A22-LIKE 1 136 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g01093 Cma-Chr18:8977427 Cma18g01090 Cma-Chr18:8964506 9.98E-68 dispersed
Cma18g01091 Cma-Chr18:8967990 Cma18g01093 Cma-Chr18:8977427 1.85E-61 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g01093 - - cmo:103489194 239.58