Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma18g01096 | ATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCAATGGGCGCTCTCAAATACAGTTCAGAATCAAGATATGATTGTTCTTCTCCATCTCACCAACCCTTCGAAAAAAGGGGAAGGATCTAAGGAGACAGCACCAAGAGCGTATGAACTAGTTCATTCTATGAGAAATCTATGTCAATTGAAGCGACCCGAGGTGGAAATTGAAGTAGCAGTGGTGGAAGGGAAGGAAAAAGGGCCAGTGATTGTGGAAGAAGCAAGAAAGCAAGGGGCATCGTTGCTGGTTTTGGGGCAGAAGAAGAAACGGTCGACGACATGGCGGCTTCTGATGGTCTGGGCTGGACACCGGCGGGGTGGCGGAGGAGACGGCGGCGGCGGCGGAACGGTGGAGTATTGTATTCAGAATGCGAGCTGCATGGCGATTGCGGTGAGAAGGAAGAGCAAGAAATTGGGTGGTTATTTGATCACAACAAAACGCCAAAAGGATTTCTGGCTTTTAGCTTGA | 510 | 49.02 | MIVVDSTIEAEGALQWALSNTVQNQDMIVLLHLTNPSKKGEGSKETAPRAYELVHSMRNLCQLKRPEVEIEVAVVEGKEKGPVIVEEARKQGASLLVLGQKKKRSTTWRLLMVWAGHRRGGGGDGGGGGTVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 169 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 8982094 | 8983456 | - | CmaCh18G010960.1 | Cma18g01096 | 314434 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma18g01096 | 169 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 169 | - | - | |
| Cma18g01096 | 169 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 2 | 149 | - | - | |
| Cma18g01096 | 169 | CDD | USP_Like | 1 | 145 | - | - | |
| Cma18g01096 | 169 | Pfam | Universal stress protein family | 1 | 146 | IPR006016 | - | |
| Cma18g01096 | 169 | Gene3D | HUPs | 1 | 154 | IPR014729 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cma04g01711 | Cma18g01096 | CCT | |
| Cma04g01711 | Cma18g01096 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma09g00797 | Cma-Chr9:3889259 | Cma18g01096 | Cma-Chr18:8982094 | 2.20E-23 | dispersed | |
| Cma11g00224 | Cma-Chr11:1122547 | Cma18g01096 | Cma-Chr18:8982094 | 1.75E-42 | wgd | |
| Cma13g01058 | Cma-Chr13:8032668 | Cma18g01096 | Cma-Chr18:8982094 | 1.29E-54 | wgd | |
| Cma18g01096 | Cma-Chr18:8982094 | Cma04g01711 | Cma-Chr4:8609437 | 8.10E-88 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma18g01096 | - | - | cmax:111467624 | 318.546 |