Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g01099 ATGGCTGTATGTGGGGATGATAAAGATAGAGTGCTGAGGATTCATGAAAGTTTGGAGGAACTTAGTACTGATTTAGCTGATTATATTGCTGAATTATCAGAGGCATCGGTGAAAGAACGTGGGGTGTTTTCTATTGCGTTATCTGGTGGTTCTGTCATTAACTTGATGGGAAAGCTCTGTGAAGCTCCTTACAATAAGACTGTCGACTGGGCCAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCCGACAGCAATTATAAGCTTGCAAAGGACAACCTTCTTTCCAAGGTGCCAATTATTCCCAGCCATGTACACTCGATCAATGATTCTGTGTCGGCAGAGGAAGCTGCTGATGAGTACAAGTTTGTCATTCGACAGTTAGTTAAATCCCGCATCGTAAGCGTGTCTGATGTAAGTGACAGTCCTAAGTTTGACCTCATTCTTCTTGGAATGGGTTCTGATGGCCACGTTGCCTCATTGTTCCCTGATCACTCAGTGCTCGAAGAGAAAGATGAATGGGTTACCTTCATTACCAATTCTCCAAAACCTCCTCCAGAGAGGATCACCTTCACATTGCCTGTGATCAACTCTGCATCCAATGTAGCCATTGTTGTGACAGGTGAAAACAAAGCAGAGACCGTTCATTTGGCCATTGACGACGTAGGACCCGACTGCCCACTCCTACCTGCGAGGCTGGTACAGCCAAAGAAAGGAAAGTTGGCATGGTTTTTGGATAAATATGCCGCTTGGAAACTTGACAATTACCAATTTCATGAGCAGTCTTAA 804 44.28 MAVCGDDKDRVLRIHESLEELSTDLADYIAELSEASVKERGVFSIALSGGSVINLMGKLCEAPYNKTVDWAKWYIFWADERVVAKSHADSNYKLAKDNLLSKVPIIPSHVHSINDSVSAEEAADEYKFVIRQLVKSRIVSVSDVSDSPKFDLILLGMGSDGHVASLFPDHSVLEEKDEWVTFITNSPKPPPERITFTLPVINSASNVAIVVTGENKAETVHLAIDDVGPDCPLLPARLVQPKKGKLAWFLDKYAAWKLDNYQFHEQS 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9000091 9003211 - CmaCh18G010990.1 Cma18g01099 314437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g01099 267 Gene3D - 8 260 - -
Cma18g01099 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 265 IPR039104 -
Cma18g01099 267 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 261 IPR037171 -
Cma18g01099 267 TIGRFAM pgl: 6-phosphogluconolactonase 14 257 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cma18g01099 267 Coils Coil 18 38 - -
Cma18g01099 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 265 - -
Cma18g01099 267 CDD 6PGL 19 250 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cma18g01099 267 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 18 248 IPR006148 GO:0005975
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01708 Cma18g01099 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g01006 Cma-Chr15:6075384 Cma18g01099 Cma-Chr18:9000091 5.72E-87 dispersed
Cma16g00026 Cma-Chr16:124453 Cma18g01099 Cma-Chr18:9000091 1.00E-67 dispersed
Cma18g01099 Cma-Chr18:9000091 Cma04g01708 Cma-Chr4:8585126 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g01099 K01057 - csv:101210739 484.952