Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g01104 ATGGCAGCGACGGGTAGAAGTGAAAGAAGTTCGCGTTCAACAGCAGAACAACAGCGACGGGTAGATTTTAGTGGTAGTGTTCGTCCTGAAGGTACTCCTAGGGAAGGGTTCTCATCGTCTTTAAATTTGTTGGAATTGCCAAGTATCGTTCAAATTGACGCAAATGTTAAACGATCTGAAGCAGGCACGATTTGTTTGGGAAATCCCGATCGTGGTCTCTACCCGGTTGAATTTAAGGATGATGAGAGCGATGTTTCCAGCGTATATTCTTCCAAATCAGAGGAGAGTTGCGGTTCTCAAGGTCCCGCTTCTCCATCTCAAGTTTTTGATATTACCCCTAAGTCCGGTGGATATGTTCTGTCTCCAACTCAATCCCCTCCTCTTCAGACGATGGATCGTGTGGGAGGAAATGAACCATATGATCCATTTAGAATCCCATCTGCAGTTTTCCAACCAAGTAGATCAATCAGCCAATTGGAATGGAGTATTGGTTCAAATGAGTCCTTGTTTAGCATTAATGTCGGAAACAATAGTTTCTCAAGAGATCATATGTTGATGTTGAGTGATTCGCAGAAGTCTAGCGAGTTAACAAAATCAAGCGAGTTGTTTGTGTTTAAACCACCACCTGTAGTTACCACATCGAGAGAAACTGAAGTGACGAGTGTTGAACTTGAAGAGGAGCCTAGAATGGCAGATACCACAGAATATGACATTAAGGACAAAGGGTCTTCGGTTGCCGAAGATCTTAGTGTAAGAAGCGAGCCTACTCCTGCGGTATCATGGAATTCCTCTAGCAAATCTTGCCGCTCCGGTGGAAGTCAAAGCAGCTCAAATTCCTTCGCTTTCCCCATTTTGGCCGATGAGGAGCAAAGTCTCGTCTTCCCTGCTGTTCATGTTCTTCTTGTTGCAAATGGAATTGCTGTTCATATTCTTCTATTTGCAAATGGCCGAGTTGCTGTTCATGTTCTTCTATCTGCAAATGGAATGTCTGTTCATGTTCTTGTCGCAAATGGAGTTTCTGTTCATGTTCTTGTCGCAAATGGAGTTTCTGTTCATGTTCTTGTCGCAAATGGAGTTGCTGTTCATCTTCTTGTTGCAAATGTGGTTGCTCTTCATCTTCTTGTTGCAAATGGGGCTGCTCTTCATCTTCTTGTTGCAAATGGGGCTGCTCTTCATCTTCTTGTTGCAAATGGGGCTGCTCTTCATCTTCTTGTTGCAAATGGGGCTGCTTTTCATCTTCTTGTTGCAAATGGGGCTGCTCTTCATCTTCTTGTTGCAAATGGGGCTGCTCTTCATCTTCTTGTTGCAAATGGGGCTGCTCTTCATGCTCTTGTTGCAAATGGGGTTGCTCTTCATGTTCGTGTCGCAAATGGGATTGCTGTTCATGTTCTTCTTGTTGCAAATGGGGTTTTTGGTCACGTTCTTGCAGCGAATGGAACTGTTGTTCATGTTCTAGTTTCTCATGCAGCTGCTTTAGTTGTCGTTTTCGTCATTGTTGTCATTTTTGTCGATGTTGTCATTTTCATCGATGTTGTTGTTTTCATGGTTGCTGTCATTATTATCCTTCTTATCATATTTGTCGTTGTTGTTGAAAAGACACTGTCGTTGAATCTTCCCTTGACATAG 1626 43.11 MAATGRSERSSRSTAEQQRRVDFSGSVRPEGTPREGFSSSLNLLELPSIVQIDANVKRSEAGTICLGNPDRGLYPVEFKDDESDVSSVYSSKSEESCGSQGPASPSQVFDITPKSGGYVLSPTQSPPLQTMDRVGGNEPYDPFRIPSAVFQPSRSISQLEWSIGSNESLFSINVGNNSFSRDHMLMLSDSQKSSELTKSSELFVFKPPPVVTTSRETEVTSVELEEEPRMADTTEYDIKDKGSSVAEDLSVRSEPTPAVSWNSSSKSCRSGGSQSSSNSFAFPILADEEQSLVFPAVHVLLVANGIAVHILLFANGRVAVHVLLSANGMSVHVLVANGVSVHVLVANGVSVHVLVANGVAVHLLVANVVALHLLVANGAALHLLVANGAALHLLVANGAALHLLVANGAAFHLLVANGAALHLLVANGAALHLLVANGAALHALVANGVALHVRVANGIAVHVLLVANGVFGHVLAANGTVVHVLVSHAAALVVVFVIVVIFVDVVIFIDVVVFMVAVIIILLIIFVVVVEKTLSLNLPLT 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9028771 9030976 - CmaCh18G011040.1 Cma18g01104 314442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g01104 541 MobiDBLite consensus disorder prediction 1 40 - -
Cma18g01104 541 MobiDBLite consensus disorder prediction 85 140 - -
Cma18g01104 541 PANTHER - 77 288 - -
Cma18g01104 541 MobiDBLite consensus disorder prediction 1 21 - -
Cma18g01104 541 MobiDBLite consensus disorder prediction 242 273 - -
Cma18g01104 541 MobiDBLite consensus disorder prediction 255 273 - -
Cma18g01104 541 MobiDBLite consensus disorder prediction 89 131 - -
Cma18g01104 541 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 77 288 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01703 Cma18g01104 CCT
Cma04g01703 Cma18g01104 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00294 Cma-Chr10:1332022 Cma18g01104 Cma-Chr18:9028771 1.24E-12 wgd
Cma11g00208 Cma-Chr11:1045296 Cma18g01104 Cma-Chr18:9028771 2.99E-11 wgd
Cma15g00235 Cma-Chr15:1152089 Cma18g01104 Cma-Chr18:9028771 1.11E-08 wgd
Cma18g01104 Cma-Chr18:9028771 Cma04g01703 Cma-Chr4:8556720 2.12E-107 wgd
Cma18g01104 Cma-Chr18:9028771 Cma04g02800 Cma-Chr4:18761145 1.22E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g01104 - - bhj:120081528 295.819