Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g01108 ATGGCGGTTTTCGTGTTCTTAGTGTTCTTCCTTGCCCTAACTGGTCAATCTTACGCCAACTATTGCTTGTGTAGAGATGGAGTGAGCCAACAAGTTCTTCAAAAAGCACTGGATTATGCCTGTGGCGCCGGAGCTGACTGTTCTCCGATCCTCTCTAATGGCGCCTGTTTTCAGCCCAACACTGTCAAAGATCACTGCAGCTACGCCGTCAACAGCTATTTCCAGAGAAAAGGTCAAGTCCAGGGAAGTTGCGACTTCTCCGGCGCCGCCACTCCCAGCGTTTCCCTCACCGCCTCTGTGCCCTCCGGCTGCGTCTACCCTTCGAACCCCAGCAATGCGGGAACCTCGCCGACGACCTCCGGCGGAACTACACCGGGGACGACGAATCCAGGAATGACGCCGTCGGTATTCGGTAACGGAATCAGTCCGAGTGGGAGCGGCGCCGGGTTCAACGACGGGAGCGGTGGCGTGGGTTTCAATGAGAAGATGAACTTGCTTTTGAGTGTGGGCTTAACTCTGTGGCTTTCCGTACTGTTGTTCTAG 543 55.25 MAVFVFLVFFLALTGQSYANYCLCRDGVSQQVLQKALDYACGAGADCSPILSNGACFQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGAATPSVSLTASVPSGCVYPSNPSNAGTSPTTSGGTTPGTTNPGMTPSVFGNGISPSGSGAGFNDGSGGVGFNEKMNLLLSVGLTLWLSVLLF 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9046835 9048242 - CmaCh18G011080.1 Cma18g01108 314446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g01108 180 SMART X8_cls 20 106 IPR012946 -
Cma18g01108 180 Gene3D - 16 109 - -
Cma18g01108 180 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 171 - -
Cma18g01108 180 MobiDBLite consensus disorder prediction 110 138 - -
Cma18g01108 180 PANTHER BETA-1,3 GLUCANASE 1 171 IPR044788 -
Cma18g01108 180 Pfam X8 domain 21 91 IPR012946 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01699 Cma18g01108 CCT
Cma04g01699 Cma18g01108 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma18g01108 Cma-Chr18:9046835 Cma18g00007 Cma-Chr18:23615 1.57E-39 dispersed
Cma12g00099 Cma-Chr12:392552 Cma18g01108 Cma-Chr18:9046835 3.52E-56 transposed
Cma10g00301 Cma-Chr10:1363494 Cma18g01108 Cma-Chr18:9046835 3.49E-41 wgd
Cma11g00200 Cma-Chr11:1011418 Cma18g01108 Cma-Chr18:9046835 4.50E-40 wgd
Cma18g01108 Cma-Chr18:9046835 Cma04g01699 Cma-Chr4:8539338 7.09E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g01108 - - cmax:111467729 282.722