Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g01112 ATGCTTTATGCTCTGCTTCGAGATTTAAACAGAAGGCGCTTCCCATTTAGAGTGGTTCCGAACTGGATTATTGAAGGTACTTCAGAAATATTGGACATGAGAAGCTCCTGGGTCAATAAAATATCTGTAATCTTGGGCTCAAAGCCACCATTCAACTGGTTAATCTTGTGTCTCATCAGCGTGCTTGCATTAATTGTAGTTCTAGGAACGTCTACTTCAAATGCCTTTGATTCAGTTTCTACCACGCCAGTGTCTGACATTTATACTAGTTATAGAAGGCAAAAAGAAAGGGCCGCAATTGATTTGTTTGACTTAAAGTCTCTTTCATTAGCCACGGGTCGACTCAAAGAGTTTGGTCTTTGTGGAAAAGAAAGAGAAAACCATGTGCCATGTTACAATGTTACAGCAAATATGTTAGCTGGATACAAAGAAGGGGAGGAGTATGATAGGCACTGTGAAGTGTCTAGAACAGCAGAGTGTTGCCTGGTTCGTCCTCCTAAAGACTACAAGATCCCTCTGAGTTGGCCTGTTGGTAGGGATATAATATGGAGTGGGAATTTGAAGGTAACAAAAGATCAACTTCTGTCTTCTGGGAGCCCTACCAAAAGGTTGATGTTATTAGAAGAGAACCAAATTTCTTTTCACTCGGAGGATGGTGATGGAGTCAAAGAGTATTCCTTTCAAATCGCAGAGATGATTGGTTTAGGCACTGACTCTGAATTTCTTCAAGCTGGTGTACGCTCGATACTTGATATTGGTTGTGGGTTTGGTAGCTTTGGTGCTCATTTAACATCAATGAATGTAATGGTTATGTGCATTGCGACCTATGAGGCGACTGGCAGCCAAGTTCAAATGGCTCTAGAGAGAGGCCTTCCAGCGATGCTTGGCAACTTTATTGCAAAACAGCTTCCATATCCATCCTTGTCATTTGACATGGTTCACTGTGCACAATGTGAAATCTCTTGGAACGATAAAGGTGGGATATTCCTTATTGAAGCCGACCGGTTGCTAAGACCTGGAGGTTATTTTGTTTTAACCTCTCCCACAAGCAAGGCAGTCGGTGGTTCATTGTCTTCCAAGAAGATAAGCATTTTGACACCACTGGAAGAGGTTACCCGAAGATTATGTTGGACTTTTTTAGCTCAGCAGTATGAAACTTATATTTGGCAGAAAACTACAGATCCTCGTTGCTATTTATCTGGCAAGCAGGAAATTGTACCACTTTGTAAAGAAGGGCATGACACTCCATCATATTATCAACCTCTGGTACCATGCCTAAGTAGTACTACCAGCAAGCGGTGGATTCCAATCCAGAACAGGTCTTCCAGTTCTCGTTTGAGTTCAGCTGAACTTGAAGTTCATGGAAAGTATTCTTCCTTAATGGTTCTGTACTGCGTTCAATCAGAAGACTACTCTGATGACTTACAAATTTGGCGAACGGCTTTGAAAAACTATTGGTCCTTACTTACGCCTTTAATTTTCTCTGACCATCCAAAGAGGCCTGGTGATGAAGATCCATTACCTCCATTTAACATGATACGCAATGTGATGGACATGAATGCTCATTATGGGGGTTTAAATGCTGCGTTTGTGGAGCAAAAGAAAACGGTTTGGGTCATGAATGTTGTGCCTGTTGGATCTCCTAATACGCTTCCCCTCATACTTGATCAAGGTTTTGCTGGTGTTCTGCACGATTGGTGTGAACCTTTCCCCACTTATCCACGAACATATGATTTGCTCCATGCAAATGGGCTCCTCTCACAGCTACTTTCAAGTAGGTGCAGCATGATTGAATTTTTAGTCGAGATGGATCGTATACTGCGCCCTGAGGGATGGGTTATTCTAAATGACAAAGTGGGACCGATAGAGAAGGCGCGAATGCTTGTTACACATATTCGTTGGGAGGCAAGGGTGATCGACTTTCAGAATGGCAGCGACCAAAGGCTCCTTGTTTGCCAGAAACCATTAGTGAAAAAATGA 1980 42.47 MLYALLRDLNRRRFPFRVVPNWIIEGTSEILDMRSSWVNKISVILGSKPPFNWLILCLISVLALIVVLGTSTSNAFDSVSTTPVSDIYTSYRRQKERAAIDLFDLKSLSLATGRLKEFGLCGKERENHVPCYNVTANMLAGYKEGEEYDRHCEVSRTAECCLVRPPKDYKIPLSWPVGRDIIWSGNLKVTKDQLLSSGSPTKRLMLLEENQISFHSEDGDGVKEYSFQIAEMIGLGTDSEFLQAGVRSILDIGCGFGSFGAHLTSMNVMVMCIATYEATGSQVQMALERGLPAMLGNFIAKQLPYPSLSFDMVHCAQCEISWNDKGGIFLIEADRLLRPGGYFVLTSPTSKAVGGSLSSKKISILTPLEEVTRRLCWTFLAQQYETYIWQKTTDPRCYLSGKQEIVPLCKEGHDTPSYYQPLVPCLSSTTSKRWIPIQNRSSSSRLSSAELEVHGKYSSLMVLYCVQSEDYSDDLQIWRTALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMNAHYGGLNAAFVEQKKTVWVMNVVPVGSPNTLPLILDQGFAGVLHDWCEPFPTYPRTYDLLHANGLLSQLLSSRCSMIEFLVEMDRILRPEGWVILNDKVGPIEKARMLVTHIRWEARVIDFQNGSDQRLLVCQKPLVKK 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9060991 9064124 - CmaCh18G011120.1 Cma18g01112 314450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g01112 659 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 127 654 IPR004159 GO:0008168
Cma18g01112 659 Gene3D Vaccinia Virus protein VP39 214 393 IPR029063 -
Cma18g01112 659 PANTHER METHYLTRANSFERASE PMT4-RELATED 33 658 - -
Cma18g01112 659 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 478 639 IPR029063 -
Cma18g01112 659 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 33 658 IPR004159 GO:0008168
Cma18g01112 659 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 170 351 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00503 Cma-Chr5:2388186 Cma18g01112 Cma-Chr18:9060991 0 dispersed
Cma09g00561 Cma-Chr9:2542882 Cma18g01112 Cma-Chr18:9060991 0 dispersed
Cma18g01112 Cma-Chr18:9060991 Cma08g01080 Cma-Chr8:6739603 5.10E-102 dispersed
Cma18g01112 Cma-Chr18:9060991 Cma04g01696 Cma-Chr4:8524929 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g01112 K23870 - csv:101213009 1221.45