Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g01197 ATGGCGAGAAGAGGAGGAGCAATTGGATCATGGCTTTGCATCGTTCTGGTTTTAATTTCTGCGCAAATTCATGTCTCACCCAGATCGGATAAGGAAATTAGGGAAAGATTTTATGGAAACTTGATCAACTCAACGGCACCGATTTCCGGTGACGGTAGTATTGCCCAAATGTTCGATAAGGTGCTCGAGAAGGAGTTCCCTGACAATGATCTGCCTGAAGGTTCGAGCGGAAGCAGCTTTAATAACAGTGTCGCTGATCAGGAGGCAGAACTGGAGACAGTAGCCAAAATCACTCATGAGAAGGGCAAGAAAAATGATAGTCAAAAGGCAAAGTATGGAACCAAAACAGTTGCTTTTGTTCTTATTTCTGAATTGTTCTATTATATACATGGGACTAGAGCATTCCAATTTCAGGATGTTTTCTCTCTGGAAAATGAAGAATCTGATGATGTTATGACGTTGATTGATAAAAAAGACAATGTATTTGTGATGTCAAACAAGAAATCAAAGTATCCAGTACTTCAAGTAGATTTGAGACTGATTTCAGACTTGGTTGTGGTTATTGTTTCTGCCGCAATTGGAGGAATTATCTTTTCTTGTTTAGGCCAACCGGTTATTGTGGGCTATCTTCTTGCGGGGTCAATTATTGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTTGTATTTCTTCTTTTTGCTTTAGGACTGGAGTTTTCTTTGACAAAGTTAAAAGTTGTGGGGGCTGTTGCTGTTTTTGGAGGTTTTCTACAGATCATCATATTTATGTTCTTATGTGGCATAATTGCCATGTTAAGTGGAGCTAAATTGTCCGAGGGTGTATTTGTCGGTTCATTTCTATCAATGTCATCTACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGGAATAGCAGTAATACTCTTCATGGTCAGGTTACTATTGGAACACTTATCTTACAGGACTGTGCCGTTGGTTTGTTATTTGCCTTGCTCCCAGTTTTGGGTGGTCACAATGGTCTTATTTTAGGAATGATATCTATGGGAAAGTTGCTACTGGTATTGTCAGTATATCTCACAGTCGCGTCCATTTTGTCGTGGTCATTTGTTCCCCGCTTTCTTAAGTTGATGATGCAGCTGTCGTCTCAAACAAATGAGTTGTACCAGCTTGCTGCTGTGGCATTTTGTTTGCTGTCTGCCTGGTGCAGTGATAAGTTGGGACTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGATATCTACCACCGACTTTGGTCAACATACTTTAGATCAGGTGGAACCAATTCGCAATTTATTTGCAGCTTTGTTCCTTTCGAGTATTGGAATGCTCATTCATGTACATTTTCTGTGGAGCCATTTGGATATTTTGCTAGCATCTGTCATGCTGGTTGTGTTTGTGAAGACAGCAGTTGTTACCGTTGTTGCAAAGGCATTTGGATACAGTATAAGGACTTCTTTTCAGGTTGGAGTCATGCTTGCTCAAATTGGAGAGTTTGCTTTTGTTCTCCTAAGCCGTGCCTCAAATCTTCATCTCATTGGGGGGAAAGTTTATCTGCTACTTCTTGGAACAACAGCACTTAGTCTAGTGACCACCCCTCTTGTGTTCAAATTGGTACCTGCTGTGCTGAATTTAGGGGTTCTCATGCATTGGTTCCCCTCTGAAAACATCATTCAAAGCGAGCCAACCTTAAGCTCATCTGCCAAACCCAAACCAACCAAATTGAAAACTCCATCACTTCCTCACTTCTCCTCCGCTGCCGGGCGTCCACCTGCGTCTCCGCGCGGCGGAGTCACCGTCATGAGGCTTGTGGTGCCTCTGCAAGGCGTTGTCCAAGGCCGTGGAGGTCTCTTGTTGGGCTCTCTCATTCCCTGTGCTCTCTTCTACTTCCTCCAACTTTATCTCAAGCGAAATCGTTCTCCCAACTCTGACTCCTCCTCGAATTCTCCGTCCCATTCTCACTCTTCCTCTAACCTCGTCGACCTCAACCGCTCGTCCTCTCGCTCTAATCTACTAACGCGCGGATCCGTTGGTCGAGTTCGGCTTTCTTCTCGAGCCAGTTCGATTGCGAAGCCCAATAACTCCCCCTACTATATTGGATTGGATCGCGTTCGGGAGGATCCTTACGATAGGTTGGATAATCCGAATGGGATTATTCAGCTTGGGTTGTCCGAGAATAGGTTGTGCTTTGATTTGCTTGAGAAATGGATATCGGAGAATTATACTGGTTCCGTTGGTGGAGGCAATAGCGTCGAGTTGAATATTATGGGGATGACTACTTACCAGCCTTTCGATGGATTGTGGGAGCTGAAAATGGCTATGGCAGGTTTCATGTCTCAGGTAATGGGTGGTGGAGTGGCTTTTGATCCATCACAATTATTGTTAACATCTGGTGCCACTGCCGCGGTCGAGGTACTCTGTTTCTGCTTAGCAGACCCTGGAAATGCATTTCTTATTCCAACTCCTTATTATCCTGGTTTTGATAGAGATGTGAAGTGGAGAACTGGAGTGGATTTAATACCAGTTCACTGTCGTAGTGCTGACAACTTTAACTTGAACATCACTGTACTAGAGCAAGCATACAATCAAGCAAGGAAGCGAGGAATAAAAGTTCGGGGAGTTCTTTTATCTAACCCTGCAAATCCAGTTGGCAACATGTTGCCCCGAGAAATGCTGTACAGTATTTTAGATTTTGCCCAAGAGAAGAATATCCATGTTGTATCTGATGAGATATTTGCAGGGTCAGTTTATGGAAACGACGAGTTTGTGAGCATGGCTGAAATGATTGATTCAGAAGATATTGACAAGAATAGAGTTCATATAGTGTATGGACTGTCGAAAGACCTCTCTCTTCCTGGCCTTAGAGTTGGTGTCATCTATTCACAAAATGAAAATGTTTTGGCTGCTGCTAGAAAAATGGCAAGATTTTGCCCGATTTCCGCACCAACCCAGCAGCTTGTTACCTTGATGCTTTTGGACAGAACCTTCGTTAATGAATACCTGGAGACGAGCAAAAAGAGGATTCGCGAGATGCATGTTCTTTTCGTGGCTGGTTTGAAACAGTTGGGAATCAAGTGTGCAAAGAGCAGTGCTGGTTTTTACTGCTGGGCTGATATGAGTGGACTGATGAATTCTTATAGTGAGAAAGGGGAGCTAGAATTATGGGAGAAGCTGCTGAATGTAGCTAAAATTAACGCGACTCCTGGATCTGCTTGTCATTGCATAGAACCTGGATGGTTTAGATGTTGTTTCACTACACTTTCACGAGAGGATTTATTGATCGTTATAGAAAGGATTAGAAAAATGGCCGTTACGTGCAAATCTCCCAGTTGA 3384 43.38 MARRGGAIGSWLCIVLVLISAQIHVSPRSDKEIRERFYGNLINSTAPISGDGSIAQMFDKVLEKEFPDNDLPEGSSGSSFNNSVADQEAELETVAKITHEKGKKNDSQKAKYGTKTVAFVLISELFYYIHGTRAFQFQDVFSLENEESDDVMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFLCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTVASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVVTVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLLGTTALSLVTTPLVFKLVPAVLNLGVLMHWFPSENIIQSEPTLSSSAKPKPTKLKTPSLPHFSSAAGRPPASPRGGVTVMRLVVPLQGVVQGRGGLLLGSLIPCALFYFLQLYLKRNRSPNSDSSSNSPSHSHSSSNLVDLNRSSSRSNLLTRGSVGRVRLSSRASSIAKPNNSPYYIGLDRVREDPYDRLDNPNGIIQLGLSENRLCFDLLEKWISENYTGSVGGGNSVELNIMGMTTYQPFDGLWELKMAMAGFMSQVMGGGVAFDPSQLLLTSGATAAVEVLCFCLADPGNAFLIPTPYYPGFDRDVKWRTGVDLIPVHCRSADNFNLNITVLEQAYNQARKRGIKVRGVLLSNPANPVGNMLPREMLYSILDFAQEKNIHVVSDEIFAGSVYGNDEFVSMAEMIDSEDIDKNRVHIVYGLSKDLSLPGLRVGVIYSQNENVLAAARKMARFCPISAPTQQLVTLMLLDRTFVNEYLETSKKRIREMHVLFVAGLKQLGIKCAKSSAGFYCWADMSGLMNSYSEKGELELWEKLLNVAKINATPGSACHCIEPGWFRCCFTTLSREDLLIVIERIRKMAVTCKSPS 1127
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9499886 9510707 - CmaCh18G011970.1 Cma18g01197 314535

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g01197 1127 Pfam Aminotransferase class I and II 736 1116 IPR004839 GO:0009058|GO:0030170
Cma18g01197 1127 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 961 974 IPR004838 GO:0003824|GO:0009058|GO:0030170
Cma18g01197 1127 Gene3D - 178 561 IPR038770 -
Cma18g01197 1127 Gene3D - 758 1010 IPR015421 GO:0003824
Cma18g01197 1127 MobiDBLite consensus disorder prediction 580 611 - -
Cma18g01197 1127 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 610 1122 - -
Cma18g01197 1127 Gene3D Aspartate Aminotransferase, domain 1 724 1115 IPR015422 GO:0003824
Cma18g01197 1127 Pfam Sodium/hydrogen exchanger family 185 554 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cma18g01197 1127 SUPERFAMILY PLP-dependent transferases 712 1119 IPR015424 -
Cma18g01197 1127 Coils Coil 864 884 - -
Cma18g01197 1127 MobiDBLite consensus disorder prediction 658 682 - -
Cma18g01197 1127 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 831 852 - -
Cma18g01197 1127 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 955 979 - -
Cma18g01197 1127 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 772 788 - -
Cma18g01197 1127 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 738 764 - -
Cma18g01197 1127 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 987 1010 - -
Cma18g01197 1127 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 885 909 - -
Cma18g01197 1127 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 809 829 - -
Cma18g01197 1127 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 921 944 - -
Cma18g01197 1127 PANTHER AMINOTRANSFERASE ACS12-RELATED 610 1122 - -
Cma18g01197 1127 CDD AAT_like 774 1118 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g01197 - - - csv:101207607 962.214
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cma15g01179 Cma18g01197 CCT
Cma15g01179 Cma18g01197 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01517 Cma-Chr2:8650601 Cma18g01197 Cma-Chr18:9499886 0 dispersed
Cma10g00712 Cma-Chr10:3201645 Cma18g01197 Cma-Chr18:9499886 0 dispersed
Cma12g00636 Cma-Chr12:3375519 Cma18g01197 Cma-Chr18:9499886 0 dispersed
Cma15g01179 Cma-Chr15:7462460 Cma18g01197 Cma-Chr18:9499886 0 dispersed
Cma18g01197 Cma-Chr18:9499886 Cma10g00702 Cma-Chr10:3155561 1.00E-137 dispersed
Cma19g00500 Cma-Chr19:5897011 Cma18g01197 Cma-Chr18:9499886 2.11E-29 dispersed
Cma18g01197 Cma-Chr18:9499886 Cma05g00096 Cma-Chr5:411737 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g513 . . . Bda07g01835 Bpe03g00099 . . Bma14g02107 . Cmo18g01218 . Cma15g01179 . Car15g01067 Sed01g3949 . . Bhi01g01257 Tan01g0340 Cmetu06g0541 . Hepe07g0221 Mch10g0223 . Cla01g00335 Cam01g0348 Cec01g0344 Cco01g0356 Clacu01g0352 Cmu01g0332 Cre09g2178 Cone1ag1108 Cone5ag0817 . . . Csa05g00357 Chy09g01150 Cme06g00927 Blo07g00461 Blo09g00131 . . . . . . . . Cmo15g01239 . Cma18g01197 . Car18g01106 Cpe09g00132 Cpe13g00195 Bhi12g00353 . . Lac11g2187 Hepe06g1617 . Lcy12g1741 Cla05g00816 Cam05g0899 Cec05g0903 Cco05g0908 Clacu05g0890 Cmu05g0846 Cre05g0932 . Csa03g01642 Chy06g00879 Cme09g01682
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma07g00218 CST 1 403 Antiporters AT5G46110 79.4 5.3e-172 601.3
Cma18g01109 . 89 416 Antiporters AT5G46110 80.2 2.7e-147 519.2
Cma03g01289 CST 1 371 Antiporters AT5G46110 71.0 1.9e-145 513.1
Cma09g00938 CCT,CST,ECH 41 396 Antiporters AT5G54800 79.5 3.7e-159 558.5
Cma01g01142 CCT,CST,ECH 1 395 Antiporters AT5G54800 73.7 4.8e-159 558.1
Cma16g00853 CCT,ECH 1 395 Antiporters AT5G54800 74.1 1.5e-155 546.6
Cma07g00303 . 1 391 Antiporters AT5G54800 71.7 1.8e-150 529.6
Cma03g00528 . 1 391 Antiporters AT5G54800 71.5 9.2e-150 527.3
Cma04g02695 . 63 393 Antiporters AT3G01550 64.7 4.5e-117 418.7
Cma13g00885 CST 50 414 Antiporters AT3G01550 59.2 1.1e-112 404.1
Cma18g00172 CST 53 417 Antiporters AT3G01550 58.4 6.3e-111 398.3
Cma18g00172 CST 1 419 Antiporters AT5G33320 72.2 3.7e-157 552.0
Cma13g00885 CST 1 416 Antiporters AT5G33320 72.0 4.0e-156 548.5
Cma04g02695 . 66 394 Antiporters AT5G33320 61.5 3.4e-110 396.0
Cma01g01142 CCT,CST,ECH 17 396 Antiporters AT1G61800 75.1 1.4e-161 566.6
Cma03g00528 . 1 388 Antiporters AT1G61800 72.9 1.0e-159 560.5
Cma07g00303 . 46 388 Antiporters AT1G61800 81.1 3.9e-159 558.5
Cma09g00938 CCT,CST,ECH 1 394 Antiporters AT1G61800 72.5 1.1e-158 557.0
Cma16g00853 CCT,ECH 45 396 Antiporters AT1G61800 80.4 7.4e-158 554.3
Cma09g00938 CCT,CST,ECH 66 393 Antiporters AT5G17630 54.4 1.2e-91 334.3
Cma01g01142 CCT,CST,ECH 85 394 Antiporters AT5G17630 54.3 2.0e-89 327.0
Cma16g00853 CCT,ECH 89 394 Antiporters AT5G17630 55.0 2.6e-89 326.6
Cma07g00303 . 91 389 Antiporters AT5G17630 54.0 6.3e-88 322.0
Cma06g00684 . 224 593 Antiporters AT3G13320 79.2 3.6e-158 555.4
Cma02g00318 . 28 419 Antiporters AT3G13320 74.2 1.1e-154 543.9
Cma20g00699 . 85 458 Antiporters AT3G13320 76.7 3.1e-154 542.3
Cma14g01228 . 133 498 Antiporters AT3G13320 75.5 1.1e-151 533.9
Cma01g00022 CCT 58 412 Antiporters AT3G13320 71.9 6.6e-136 481.5
Cma03g00349 CST 5 430 Antiporters AT2G38170 69.6 5.0e-158 555.1
Cma06g00231 CST 20 399 Antiporters AT2G38170 63.2 5.2e-131 465.3
Cma01g00661 . 59 365 Antiporters AT2G38170 52.6 1.9e-88 323.9
Cma07g01054 CST 1 184 Antiporters AT2G38170 53.7 1.2e-53 208.4
Cma03g00349 CST 1 398 Antiporters AT3G51860 70.6 1.1e-146 517.3
Cma06g00231 CST 21 396 Antiporters AT3G51860 67.2 1.7e-134 476.9
Cma01g00661 . 59 365 Antiporters AT3G51860 55.4 1.3e-94 344.4
Cma06g00684 . 224 564 Antiporters AT3G51860 52.2 9.5e-85 311.6
Cma20g00699 . 77 429 Antiporters AT3G51860 50.7 2.6e-82 303.5
Cma02g00318 . 36 390 Antiporters AT3G51860 50.4 3.4e-82 303.1
Cma07g01054 CST 1 157 Antiporters AT3G51860 53.4 1.8e-43 174.5
Cma03g00349 CST 34 426 Antiporters AT5G01490 62.4 3.5e-132 469.2
Cma06g00231 CST 28 399 Antiporters AT5G01490 58.6 2.9e-115 412.9
Cma06g00684 . 223 593 Antiporters AT1G55720 76.1 4.4e-148 521.9
Cma20g00699 . 85 458 Antiporters AT1G55720 73.9 8.4e-147 517.7
Cma02g00318 . 44 419 Antiporters AT1G55720 72.4 5.1e-144 508.4
Cma14g01228 . 133 498 Antiporters AT1G55720 71.1 2.2e-139 493.0
Cma01g00022 CCT 58 396 Antiporters AT1G55720 69.2 8.2e-126 448.0
Cma06g00684 . 214 593 Antiporters AT1G55730 78.2 7.7e-161 564.3
Cma20g00699 . 58 458 Antiporters AT1G55730 73.9 1.4e-159 560.1
Cma02g00318 . 45 419 Antiporters AT1G55730 76.8 3.0e-157 552.4
Cma14g01228 . 133 498 Antiporters AT1G55730 75.8 1.3e-152 537.0
Cma01g00022 CCT 58 412 Antiporters AT1G55730 71.9 5.9e-137 485.0
Cma03g00349 CST 65 429 Antiporters AT1G55730 50.9 6.6e-96 348.6
Cma10g01092 . 4 534 Antiporters AT5G27150 76.7 1.4e-233 806.2
Cma11g01251 . 60 579 Antiporters AT5G27150 75.3 9.2e-225 776.9
Cma08g01201 . 22 530 Antiporters AT5G27150 74.8 5.4e-217 751.1
Cma17g01131 . 25 533 Antiporters AT5G27150 70.3 2.2e-202 702.6
Cma01g01101 . 12 496 Antiporters AT5G27150 59.2 2.6e-155 546.2
Cma08g01201 . 22 539 Antiporters AT3G06370 71.7 1.1e-209 726.9
Cma10g01092 . 5 533 Antiporters AT3G06370 69.8 1.9e-204 709.5
Cma11g01251 . 57 579 Antiporters AT3G06370 67.9 2.6e-198 689.1
Cma17g01131 . 25 535 Antiporters AT3G06370 66.0 1.1e-185 647.1
Cma01g01101 . 5 473 Antiporters AT3G06370 62.2 3.5e-155 545.8
Cma01g01101 . 1 496 Antiporters AT5G55470 69.5 6.8e-196 681.0
Cma10g01092 . 18 520 Antiporters AT5G55470 59.0 1.0e-167 587.4
Cma08g01201 . 19 517 Antiporters AT5G55470 58.7 8.6e-167 584.3
Cma11g01251 . 69 564 Antiporters AT5G55470 57.8 2.2e-162 569.7
Cma17g01131 . 11 519 Antiporters AT5G55470 56.4 7.3e-158 554.7
Cma10g01092 . 10 537 Antiporters AT3G05030 78.2 7.4e-238 820.5
Cma11g01251 . 61 581 Antiporters AT3G05030 76.7 8.7e-231 797.0
Cma08g01201 . 22 530 Antiporters AT3G05030 75.6 1.9e-222 769.2
Cma17g01131 . 25 536 Antiporters AT3G05030 70.1 1.4e-204 709.9
Cma01g01101 . 12 472 Antiporters AT3G05030 62.5 4.9e-157 552.0
Cma14g01328 . 102 663 Antiporters AT1G15460 70.9 1.3e-229 793.1
Cma05g00405 CCT,ECH 99 659 Antiporters AT1G15460 66.6 3.6e-219 758.4
Cma12g00320 CCT,ECH 99 657 Antiporters AT1G15460 64.2 1.2e-209 726.9
Cma14g00951 CST 102 645 Antiporters AT1G15460 59.0 2.3e-181 632.9
Cma01g00269 CST 102 645 Antiporters AT1G15460 58.8 1.1e-178 624.0
Cma13g00886 . 102 644 Antiporters AT1G15460 57.4 1.0e-176 617.5
Cma01g00269 CST 3 697 Antiporters AT3G06450 70.7 3.3e-294 1008.1
Cma14g00951 CST 3 709 Antiporters AT3G06450 69.3 1.1e-289 993.0
Cma13g00886 . 3 651 Antiporters AT3G06450 73.3 9.4e-281 963.4
Cma05g00405 CCT,ECH 3 638 Antiporters AT3G06450 56.0 5.8e-214 741.5
Cma12g00320 CCT,ECH 3 635 Antiporters AT3G06450 55.6 1.7e-213 740.0
Cma14g01328 . 6 647 Antiporters AT3G06450 55.5 4.2e-212 735.3
Cma14g00951 CST 1 716 Antiporters AT2G47160 79.0 0.0e+00 1151.3
Cma01g00269 CST 1 702 Antiporters AT2G47160 79.0 0.0e+00 1142.1
Cma13g00886 . 1 680 Antiporters AT2G47160 73.4 4.6e-304 1040.8
Cma14g01328 . 1 647 Antiporters AT2G47160 56.3 5.2e-215 745.0
Cma05g00405 CCT,ECH 4 638 Antiporters AT2G47160 57.5 1.2e-214 743.8
Cma12g00320 CCT,ECH 4 635 Antiporters AT2G47160 56.0 2.4e-212 736.1
Cma14g01328 . 1 663 Antiporters AT1G74810 69.9 1.1e-275 946.4
Cma05g00405 CCT,ECH 4 659 Antiporters AT1G74810 66.7 1.2e-256 883.2
Cma12g00320 CCT,ECH 4 652 Antiporters AT1G74810 64.1 4.1e-246 848.2
Cma13g00886 . 7 644 Antiporters AT1G74810 58.7 3.6e-218 755.4
Cma14g00951 CST 7 645 Antiporters AT1G74810 58.9 8.1e-218 754.2
Cma01g00269 CST 7 645 Antiporters AT1G74810 59.2 4.4e-216 748.4
Cma14g00951 CST 1 708 Antiporters AT3G62270 81.1 0.0e+00 1154.8
Cma01g00269 CST 1 689 Antiporters AT3G62270 81.6 0.0e+00 1139.0
Cma13g00886 . 1 695 Antiporters AT3G62270 75.0 4.3e-307 1050.8
Cma14g01328 . 1 647 Antiporters AT3G62270 58.3 6.8e-220 761.1
Cma05g00405 CCT,ECH 4 638 Antiporters AT3G62270 59.8 9.9e-219 757.3
Cma12g00320 CCT,ECH 4 635 Antiporters AT3G62270 57.4 2.7e-216 749.2
Cma05g00405 CCT,ECH 4 657 Antiporters AT4G32510 68.5 2.7e-266 915.2
Cma14g01328 . 1 664 Antiporters AT4G32510 65.4 7.9e-258 887.1
Cma12g00320 CCT,ECH 4 654 Antiporters AT4G32510 66.5 3.9e-257 884.8
Cma01g00269 CST 1 659 Antiporters AT4G32510 54.7 8.9e-209 724.2
Cma13g00886 . 1 650 Antiporters AT4G32510 54.5 1.3e-207 720.3
Cma14g00951 CST 1 646 Antiporters AT4G32510 54.5 1.9e-206 716.5
Cma05g00405 CCT,ECH 4 655 Antiporters AT5G25430 69.0 2.2e-260 895.6
Cma12g00320 CCT,ECH 4 652 Antiporters AT5G25430 68.3 7.1e-259 890.6
Cma14g01328 . 7 664 Antiporters AT5G25430 66.0 1.5e-248 856.3
Cma01g00269 CST 7 645 Antiporters AT5G25430 56.0 4.8e-207 718.4
Cma14g00951 CST 7 645 Antiporters AT5G25430 55.5 5.0e-204 708.4
Cma13g00886 . 7 656 Antiporters AT5G25430 54.5 1.5e-203 706.8
Cma04g02154 . 27 1138 Antiporters AT2G01980 65.8 0.0e+00 1363.6
Cma04g02154 . 23 738 Antiporters AT1G14660 65.8 2.0e-270 929.1
Cma05g00096 . 29 586 Antiporters AT5G11800 80.0 5.6e-239 824.3
Cma12g00636 CCT 44 581 Antiporters AT5G11800 82.0 8.3e-235 810.4
Cma10g00712 CCT,CST 33 587 Antiporters AT5G11800 77.6 5.8e-228 787.7
Cma11g00684 CCT,CST 19 587 Antiporters AT5G11800 75.9 5.4e-226 781.2
Cma18g01197 CCT,ECH 51 588 Antiporters AT5G11800 67.4 2.9e-187 652.5
Cma18g01197 CCT,ECH 25 591 Antiporters AT5G51710 77.4 7.1e-236 813.9
Cma05g00096 . 51 560 Antiporters AT5G51710 70.0 1.5e-188 656.8
Cma12g00636 CCT 46 562 Antiporters AT5G51710 69.7 4.2e-188 655.2
Cma10g00712 CCT,CST 26 560 Antiporters AT5G51710 67.5 8.8e-186 647.5
Cma11g00684 CCT,CST 51 560 Antiporters AT5G51710 69.8 1.4e-183 640.2
Cma10g00712 CCT,CST 36 584 Antiporters AT2G19600 82.2 7.5e-236 813.9
Cma05g00096 . 44 586 Antiporters AT2G19600 80.9 1.6e-233 806.2
Cma11g00684 CCT,CST 6 584 Antiporters AT2G19600 78.2 1.0e-232 803.5
Cma12g00636 CCT 39 581 Antiporters AT2G19600 79.5 5.2e-229 791.2
Cma18g01197 CCT,ECH 29 573 Antiporters AT2G19600 65.5 5.8e-180 628.2
Cma16g00346 . 143 558 Antiporters AT1G49810 76.3 1.5e-177 619.8
Cma16g00346 . 1 575 Antiporters AT3G19490 77.6 2.3e-245 845.5
Cma20g00081 CST 83 569 Antiporters AT5G12860 89.5 1.0e-250 863.2
Cma02g01248 CST 351 906 Antiporters AT5G12860 81.5 2.9e-250 861.7
Cma16g00265 . 86 564 Antiporters AT5G64280 68.7 8.0e-192 667.5
Cma04g00403 . 4 490 Antiporters AT5G64280 64.2 1.2e-182 637.1
Cma16g00265 . 1 568 Antiporters AT5G64290 69.0 6.3e-208 721.1
Cma04g00403 . 22 490 Antiporters AT5G64290 75.5 1.4e-199 693.3
Cma19g00993 . 3 379 Antiporters AT4G28390 82.3 9.5e-176 613.6
Cma08g00532 . 3 390 Antiporters AT4G28390 74.4 2.2e-156 549.3
Cma08g00531 . 3 390 Antiporters AT4G28390 74.4 3.8e-156 548.5
Cma08g00530 . 3 391 Antiporters AT4G28390 74.2 4.9e-156 548.1
Cma13g01057 . 403 705 Antiporters AT4G28390 63.2 5.9e-109 391.7
Cma18g00019 . 65 366 Antiporters AT4G28390 63.1 6.5e-108 388.3
Cma08g00531 . 1 391 Antiporters AT3G08580 79.6 8.9e-174 607.1
Cma08g00532 . 1 391 Antiporters AT3G08580 79.6 1.2e-173 606.7
Cma08g00530 . 1 390 Antiporters AT3G08580 79.8 1.5e-173 606.3
Cma19g00993 . 1 378 Antiporters AT3G08580 71.8 2.6e-149 525.8
Cma13g01057 . 405 705 Antiporters AT3G08580 57.6 2.0e-96 350.1
Cma18g00019 . 67 366 Antiporters AT3G08580 58.1 1.3e-95 347.4
Cma08g00532 . 1 391 Antiporters AT5G13490 83.2 2.1e-183 639.0
Cma08g00531 . 1 391 Antiporters AT5G13490 83.2 2.1e-183 639.0
Cma08g00530 . 1 390 Antiporters AT5G13490 82.1 2.6e-181 632.1
Cma19g00993 . 63 378 Antiporters AT5G13490 88.3 5.7e-160 561.2
Cma13g01057 . 406 705 Antiporters AT5G13490 61.5 3.1e-105 379.4
Cma18g00019 . 68 366 Antiporters AT5G13490 62.3 5.2e-105 378.6
Cma13g01057 . 402 699 Antiporters AT5G17400 79.5 2.4e-137 485.7
Cma18g00019 . 65 361 Antiporters AT5G17400 76.8 5.6e-134 474.6
Cma19g00993 . 79 365 Antiporters AT5G17400 64.1 2.8e-109 392.5
Cma08g00532 . 90 382 Antiporters AT5G17400 63.1 3.8e-106 382.1
Cma08g00531 . 90 382 Antiporters AT5G17400 63.1 3.8e-106 382.1
Cma08g00530 . 90 382 Antiporters AT5G17400 62.8 6.4e-106 381.3
Cma10g01074 . 3 537 Antiporters AT1G08960 66.1 2.9e-186 649.0
Cma14g00536 . 16 572 Antiporters AT5G17850 50.5 2.9e-149 526.2
Cma06g00904 . 51 552 Antiporters AT5G17850 52.8 4.0e-146 515.8
Cma14g00903 . 17 532 Antiporters AT2G47600 70.9 5.8e-211 731.1
Cma08g00693 CCT,CST 1 291 Antiporters AT1G79900 70.5 3.7e-119 425.2
Cma14g01309 CCT,CST 1 300 Antiporters AT1G79900 67.8 1.7e-116 416.4
Cma01g00111 CCT,CST 1 300 Antiporters AT1G79900 66.4 1.2e-114 410.2
Cma17g00803 CCT,CST 13 312 Antiporters AT1G79900 65.4 3.5e-109 392.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002106 1 2 3 1 2 2 2 2 2 2 2 2 3 2 2 3 2 5 3 2 2 2 2 2 2 2 2 2 2 1 64
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma18g01197 Cma_Chr18 FPKM 9.73455 10.006284 13.687086 13.52004 10.740817 10.693357 12.390503 10.715169 10.27358 11.020325