Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma18g01214 | ATGTTTCAGACAATGGCTAAAAATGCGACAGTCTTGTTTCTAATGATGATTGTTTGTGTGTCGGAAGCAGTTCTTGATACCAATTACTACTCTAAAACATGTCCCAATGCCGAGAAAATCATCCTCCAAACCGTCTACAATGCTTCCATTCATGACCCCAAAGTCCCTGCCCGTCTTCTCAGGCTCTTCTTCCACGACTGTTTCATAAGGGGATGCGATGCATCAGTGCTGATAGATTCAGCGCCAGGGAATCAGGCAGAGAAAGATGCACCTCCAAACATCTCGTTAAGGTCGTTTTATGTGATCGACGAGGCCAAATCCAAGCTTGAAACTGCTTGCCCACATTCTGTTTCTTGTGCTGATATTGTCGCCATTGCTGCTAGAGATGTTGTTACTCTGTCTGGGGGGCCATATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCCAATGCTTCTGAAACCATCAACTTACCAGCTCCAACTTTCAATGTATCTCAACTAATCCAGAGCTTTGCAAACAGAGGATTGCAAGTTAAAGACTTGGTTGCTCTATCCGGGGCTCATACGCTTGGGTTCTCCCACTGTTCTTCCTTTCAATCTAGACTTCGCAACTTTAGCTCGCTTCATGATACTGATCCAACTTTGGAATCTGGGTTTACTCAAATTCTGAAAAACAAATGTCCAAAACCAAATTTGGACAAAAATGCAGGACAGTTCTTGGACCCAACTTCCTCAACGTTTGATAATGTGTATTACAAGAGACTGTTGGAAGGGAAGGGTGTGTTTGGTTCAGATCAATCTCTGTTTGGTGATTCAAGAACTAAAACGATTGTTGAATCGTTTGCTAATGATCAGAACTTGTTCTTTAAGGAATTTGCAGCTTCAATGGTGAAATTGGGTAATGTTGGGGTTATTGAAAATGGCAATGTCAGATTCAATTGCAGGGTGGTGAACTGA | 963 | 42.37 | MFQTMAKNATVLFLMMIVCVSEAVLDTNYYSKTCPNAEKIILQTVYNASIHDPKVPARLLRLFFHDCFIRGCDASVLIDSAPGNQAEKDAPPNISLRSFYVIDEAKSKLETACPHSVSCADIVAIAARDVVTLSGGPYWSVLKGRKDGKISNASETINLPAPTFNVSQLIQSFANRGLQVKDLVALSGAHTLGFSHCSSFQSRLRNFSSLHDTDPTLESGFTQILKNKCPKPNLDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQSLFGDSRTKTIVESFANDQNLFFKEFAASMVKLGNVGVIENGNVRFNCRVVN | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 9599503 | 9600806 | - | CmaCh18G012140.1 | Cma18g01214 | 314552 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma18g01214 | 320 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 182 | 192 | IPR019793 | - | |
Cma18g01214 | 320 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Haem peroxidase superfamily signature | 182 | 197 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Haem peroxidase superfamily signature | 242 | 257 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PANTHER | PEROXIDASE 25-RELATED | 8 | 319 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | Pfam | Peroxidase | 48 | 286 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 320 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | Gene3D | - | 28 | 320 | - | - | |
Cma18g01214 | 320 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 320 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | Gene3D | Peroxidase, domain 2 | 160 | 301 | - | - | |
Cma18g01214 | 320 | PANTHER | PEROXIDASE 66 | 8 | 319 | - | - | |
Cma18g01214 | 320 | CDD | secretory_peroxidase | 25 | 319 | IPR033905 | GO:0004601|GO:0042744 | |
Cma18g01214 | 320 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Plant peroxidase signature | 181 | 193 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Plant peroxidase signature | 240 | 255 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Plant peroxidase signature | 256 | 273 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma18g01214 | 320 | PRINTS | Plant peroxidase signature | 296 | 309 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g00004 | Cma-Chr3:113766 | Cma18g01214 | Cma-Chr18:9599503 | 1.06E-95 | dispersed | |
Cma03g00661 | Cma-Chr3:5545692 | Cma18g01214 | Cma-Chr18:9599503 | 1.60E-113 | dispersed | |
Cma07g00408 | Cma-Chr7:1767659 | Cma18g01214 | Cma-Chr18:9599503 | 1.94E-120 | dispersed | |
Cma09g00392 | Cma-Chr9:1659169 | Cma18g01214 | Cma-Chr18:9599503 | 5.07E-83 | dispersed | |
Cma18g01214 | Cma-Chr18:9599503 | Cma20g00633 | Cma-Chr20:2948709 | 2.04E-92 | dispersed | |
Cma18g01214 | Cma-Chr18:9599503 | Cma12g00394 | Cma-Chr12:2033702 | 3.03E-124 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma18g01214 | K00430 | - | csv:101210306 | 559.681 |