Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g01251 ATGAATCCAGCCGGCTTCGGAGCTCCATTCCTAGCAGTTCTGTTTCTTCTTGCTGCAGCGCTACGGTCACTACCGCTCGCCGGAGCACGGCTTCAGGTGGCGATGACGGTGGTTAGAAATGCCTCTTCCGTCGGAGCCTTTTGTTTGGACGGCAGCTTGCCGGCGTACCACCTGGACAGGGGATTCGGCGCCGGAGCAGGAAACTGGCTTCTACAGTTCGAGGGAGGTGGGTGGTGCAATGACGTGGAGTCTTGTTTGGAGAGAGCCAAGACCCGTAGAGGTTCAACGCAGTTGATGAACAAATGGGAAGACTTCAATGGTATTCTCAGCAATAATGCTTCTCTTAATCCAGATTTTTATAACTGGAACCGTGTGAAGCTGAGGTACTGTGACGGAGCCTCATTTGGAGGAGATGCATTGTTCCACAACGGGACATCACCGCTTTATTTCAAAGGCCAAAAGATATGGGAATCCATCATTCTTGACCTTCTACCAAAAGGGTTGGGGACAGCAAACAAGGCTTTGCTTTCTGGATGCTCAGCTGGAGGTCTAGCCACGTTTCTGCACTGTGAAGATTTCACCAACTATTTACCAAGAGACGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTACAAGACATTGGTTCAACCCACACCATGAGGGGCTTCTTTAAGGATCTTGTGGCTCTCCAGGGAATGAACCCAAATCTGAATGAAAACTGCACGGCGGCCTCTTCTAACCTTCCAGATTTGTGCATATTCCCACAGCATGCCTTGAAGTACATAGCCACACCGTTTTTCATACTGAATTCAGCTTATGATGTTTACCAATTTCATCATGGATTGGTGCCACCATCTGCTGATATACATGGACGATGGAAACACTGCAAAATGAATCCAGCAGCCTGTAGTCTAAGATCGAGTATGCTTTCTGCATTAAAATTGTTCTATCAATATTCAAGCAAAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCACAAAACACATGGTTTGCAAAGGGCTCCCCAACAATTGACAACAAGACTATAGCAGGAACAGTTGGAGATTGGTACTTTAACAGAAGGAACATAAAGGAGATTGATTGTGCTTATCCATGCGACTCCACTTGCCATAATCTTATACCATAA 1176 46.09 MNPAGFGAPFLAVLFLLAAALRSLPLAGARLQVAMTVVRNASSVGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVESCLERAKTRRGSTQLMNKWEDFNGILSNNASLNPDFYNWNRVKLRYCDGASFGGDALFHNGTSPLYFKGQKIWESIILDLLPKGLGTANKALLSGCSAGGLATFLHCEDFTNYLPRDATVKCLSDAGFFLDLQDIGSTHTMRGFFKDLVALQGMNPNLNENCTAASSNLPDLCIFPQHALKYIATPFFILNSAYDVYQFHHGLVPPSADIHGRWKHCKMNPAACSLRSSMLSALKLFYQYSSKGGMFINSCFAHCQSESQNTWFAKGSPTIDNKTIAGTVGDWYFNRRNIKEIDCAYPCDSTCHNLIP 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9760140 9764162 - CmaCh18G012510.1 Cma18g01251 314589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g01251 391 Pfam Pectinacetylesterase 30 371 IPR004963 GO:0016787
Cma18g01251 391 PANTHER PECTIN ACETYLESTERASE 9 29 391 - -
Cma18g01251 391 PANTHER NOTUM-RELATED 29 391 IPR004963 GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma16g00121 Cma18g01251 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma16g00513 Cma-Chr16:2635616 Cma18g01251 Cma-Chr18:9760140 2.95E-125 dispersed
Cma16g00121 Cma-Chr16:561081 Cma18g01251 Cma-Chr18:9760140 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g01251 K19882 - csv:101216160 666.381