Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma18g01303 | ATGGTATGCAGCTACAATATCAGGAATGTGATTTCTTGGGCTGGACATGTAGGAATAATCAACCGAAGGGTTCAAATCAACAATATCTGGAGGAGCTTGCCTTCAAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACAAGTCTCATGATGATGGTCGATACGGGTGCATCAGAAAATCGCAGGCCGGTTGTTGATAAGCATCCAGAGAAAAATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGTGACGATGGGAAACTTAGTTGGGGGTATTCAAGTATCAGGGGGAAGAGGGCAACCATGGAAGATTTCTTCGATATTAAAATGTCGAAGGTTGATGGTCAAACGGTTTGCCTTTTTGGGATCTTTGATGGCCATGGTGGATCTCGTGCCGCAGAGTTTTTGAAGGACCATCTCTTCGAGAATCTGATGAAGCACCCGAAGTTTTTGATGGATACCAAAGTAGCTATCAGTGAAACATATCAACGGACCGATGCTGAATTTTTAAGTTTGGAAAAAGAAACTTTAAGGGACGATGGCTCCACTGCTTCAACAGCTTTGCTAGTTGGCAATCATCTCTATGTTGCCAACGTTGGTGATTCGCGTGCTATAATATCAAAAGGGGGTGAAGCAATCCCTCTTTCTGAGGACCACAAACCAAATAGAACTGACGAGCGGCGGAGAATTGAAAAGGCCGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGTGTGTTAGCAATGTCCCGCGCTTTCGGCAACAAGATGTTGAAGCAGTTTGTTGTTGCAGATCCTGATATTCAGGATCTTGAAGTAGACAAGGACGTCGAGTTGCTTATTCTCGCAAGCGATGGTCTTTGGGATGTGGTTCGCAACGAGGATGCAGTACTAGTTGCAGGGAAGGAAGAAGAACCCGAGGCAGCTGCTCGGAAGCTAACCGAAGCAGCATTTACCCGTGGTAGCGCTGACAATATAACATGCATTGTGGTGAAGTTTCATCATGATAATGCAGGTCCTGCTGCCGAAACTCGAGAAATCGACTAA | 1062 | 46.05 | MVCSYNIRNVISWAGHVGIINRRVQINNIWRSLPSNLGFVHTWKREYRTSLMMMVDTGASENRRPVVDKHPEKNEDGGYASGGWKSDDGKLSWGYSSIRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLMDTKVAISETYQRTDAEFLSLEKETLRDDGSTASTALLVGNHLYVANVGDSRAIISKGGEAIPLSEDHKPNRTDERRRIEKAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDVELLILASDGLWDVVRNEDAVLVAGKEEEPEAAARKLTEAAFTRGSADNITCIVVKFHHDNAGPAAETREID | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 10027315 | 10031046 | - | CmaCh18G013030.1 | Cma18g01303 | 314641 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma18g01303 | 353 | MobiDBLite | consensus disorder prediction | 62 | 83 | - | - | |
Cma18g01303 | 353 | ProSiteProfiles | PPM-type phosphatase domain profile. | 92 | 338 | IPR001932 | - | |
Cma18g01303 | 353 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 46 | 348 | - | - | |
Cma18g01303 | 353 | SMART | PP2C_SIG_2 | 90 | 338 | IPR001932 | - | |
Cma18g01303 | 353 | PANTHER | ALPHABET, ISOFORM E-RELATED | 46 | 348 | - | - | |
Cma18g01303 | 353 | SUPERFAMILY | PP2C-like | 90 | 339 | IPR036457 | - | |
Cma18g01303 | 353 | Gene3D | - | 84 | 343 | IPR036457 | - | |
Cma18g01303 | 353 | ProSitePatterns | PPM-type phosphatase domain signature. | 123 | 131 | IPR000222 | GO:0043169 | |
Cma18g01303 | 353 | CDD | PP2Cc | 94 | 338 | IPR001932 | - | |
Cma18g01303 | 353 | SMART | PP2C_4 | 82 | 336 | IPR001932 | - | |
Cma18g01303 | 353 | MobiDBLite | consensus disorder prediction | 62 | 76 | - | - | |
Cma18g01303 | 353 | Pfam | Protein phosphatase 2C | 96 | 331 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma09g00389 | Cma-Chr9:1640856 | Cma18g01303 | Cma-Chr18:10027315 | 2.14E-121 | dispersed | |
Cma16g00066 | Cma-Chr16:282142 | Cma18g01303 | Cma-Chr18:10027315 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma18g01303 | K17506 | - | csv:101203681 | 668.307 |