Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00086 ATGGAAAAGGAACAATTACAAGTACTAAATGCATTAGATGTTGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTCTTCTGCATATCCCTTGTCACAAAATTACTTGGAAGAATCTACTATCATGTTGATGGTGCAAAAAAACCTGGATCATTGCCTCCAAACGTTGCAGCTGCCGTTAACGGCGTAGCGTTCTGCGGAACGCTTGCCGGGCAACTCTTCTTCGGCTGGTTAGGCGATAAAATGGGACGAAAACGAGTCTATGGCTTAACTCTAATGCTGATGGTTGTTTGCTCCATAGGCTCTGGCCTCTCCTTTGGCCACAATTCACAATGTGTCATGACTACTCTATGCTTCTTTCGATTCTGGCTCGGTTTCGGCATTGGTGGCGATTACCCTCTTTCAGCAACGATCATGTCGGAATACTCGAATAAGAAGACTCGTGGTGCGTTCATTGCTGCTGTGTTTGCTATGCAGGGATTTGGAATTTTAGGTGGCGGGATATTCGCCATTATCGTGTCGTCGGCGTTTAAGTCGAAGTTTGATGCTCCATCTTATGCTGTTGATCCAGTTGCCTCTACTGTGCCACAAGCTGATTATGTTTGGAGGATTATACTAATGGTTGGTGCTCTTCCTGCTGCTCTTACTTATTACTCGAGGATGAAAATGCCCGAAACCGCACGCTACACCGCGCTTGTAGCAAAGGATACCGCTCAAGCTGCATCGGATATGTCGAAAGTTATGCAAATGGATATCGAGGGCGAAGGAGCAAAGCCTGCTGAACCGACGCCAAGTGATAGTGTTAGTTCATATGGATTGCTCTCTAAAGAGTTCTTTAGTCGCCATGGAACTCATTTACTTGGAACTACAAGCACTTGGTTTCTACTTGACATAGCCTTCTACAGCCAAAACTTATTTCAAAAGGATATCTTTAGCGCCATTGGATGGATACCACCAGCAGCCACCATGAATGCACTTGAAGAAGTCTTTAGAATAGCAAGAGCTCAAACATTGATAGCCCTCTGCAGCACTGTCCCTGGCTATTGGTTCACAGTGGCTTTCATTGATAGAATTGGAAGATTTGCCATTCAACTAATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTTTAGCCATTCCATATCATCATTGGACGTTAAAGGACAATCGGATCGGCTTCGTTGTCCTCTACTCATTAACATTCTTCTTTGCAAACTTTGGACCGAATGCTACCACGTTCGTCGTCCCAGCTGAGATCTTCCCGGCACGATTCCGTTCAACTTGTCATGGTATATCATCAGCTGCAGGGAAGCTTGGAGCTATGGTGGGTGCGTTTGGTTTTCTATATTTGGCTCAAAACCAAGATAAAAACAAAACTGAGGCTGGATATCCTCCTGGGATTGGAGTTAAGAACTCGCTTTTGTTGTTGGGTGCACTTAACTTCTTGGGGATTTTGTTTACTTTTCTTGTGCCGGAAGCTAAGGGGAAATCGTTGGAAGAGATGTCGGGCGAGATCGATGATGGTACCATTGGACAACTGGGTGGCCAAACATCTTCTAGTACGACAAAGTCATGTGTTTGA 1623 44.61 MEKEQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGSLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGLTLMLMVVCSIGSGLSFGHNSQCVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIVSSAFKSKFDAPSYAVDPVASTVPQADYVWRIILMVGALPAALTYYSRMKMPETARYTALVAKDTAQAASDMSKVMQMDIEGEGAKPAEPTPSDSVSSYGLLSKEFFSRHGTHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNALEEVFRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAMVGAFGFLYLAQNQDKNKTEAGYPPGIGVKNSLLLLGALNFLGILFTFLVPEAKGKSLEEMSGEIDDGTIGQLGGQTSSSTTKSCV 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 514822 516444 + CmaCh19G000860.1 Cma19g00086 314774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00086 540 MobiDBLite consensus disorder prediction 521 540 - -
Cma19g00086 540 Gene3D MFS general substrate transporter like domains 20 530 IPR036259 -
Cma19g00086 540 TIGRFAM 2A0109: phosphate:H+ symporter 11 518 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cma19g00086 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 509 IPR020846 GO:0022857
Cma19g00086 540 SUPERFAMILY MFS general substrate transporter 11 516 IPR036259 -
Cma19g00086 540 Pfam Sugar (and other) transporter 26 516 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cma19g00086 540 CDD MFS_PhT 25 508 - -
Cma19g00086 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 522 - -
Cma19g00086 540 MobiDBLite consensus disorder prediction 525 540 - -
Cma19g00086 540 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4 1 522 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01810 Cma-Chr14:12979490 Cma19g00086 Cma-Chr19:514822 0 dispersed
Cma17g00166 Cma-Chr17:859051 Cma19g00086 Cma-Chr19:514822 0 dispersed
Cma19g00086 Cma-Chr19:514822 Cma07g00261 Cma-Chr7:1162103 8.23E-11 dispersed
Cma19g00085 Cma-Chr19:510885 Cma19g00086 Cma-Chr19:514822 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00086 K08176 - qsu:111998651 896.345