Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00117 ATGGATTTCAACTCCCAAATGGTTTTTTCCACCATTTTCCTCTGTTTTCTTTGGCTTCAAGTTCAAGCAAACGCTTCCAATCTCCAAACTTACATGATTCAACTCCATCCACAAGGATTAACCAGCTCTGTTTTCGAATCTAAGCTTCAATGGCATCTTTCTTTTCTTGAACAAACGCTATCTGTTGAAGAAGACTGTTCTTCTCGCTTGCTTTATTCATATTCTAACGCCATGGAAGGATTTGCAGCTCAGTTATCTGAAACTGAGCTGGAGTATTTGAAGAAGTTGCCTGATGTTGTGGCTGTAAGAGCTGATAGAAAGTATGAAATTCAGACAACTTATTCACATAAGTTCTTGGGGCTTAGTGTTTGCACACAAGGTGTTTGTTATAAGTCCTCAATGGGCCAAGGGGCAATCGTTGGGGTTCTTGACACGGGAGTTTGGCCTGAGAGTCCAAGCTTTAGTGATTCCAAAATGCCCCCAATTCCACAAAAATGGCGAGGGGGTTGCCAAGAAGGGCAAGATTTTAATTCCTCAAGTTGTAATAGGAAACTCATTGGTGCTAAGTTCTTCATCAAAGGACATCATGTGGCTTCGTCGCCGCCTTCCGATATCGTCCAGGAATATGTCTCCCCAAGAGACTCCCATGGCCATGGGACTCACACTTCTTCTACAGCTGCTGGAGCTTTGGTTGCCGGAGCGAGCGTATTCGGTAATGGAGTGGGTGTGGCGCAGGGGATGGCCCCGGGCACCCACATTGCGGTGTACAAGGTTTGCTGGTTTAGTGGCTGCTATAGCTCTGATATTGTAGCGGCCATGGATTCTGCAATAAGAGATGGTGTTGACATTCTCTCCCTTTCGCTTGGTGGCTTCCCACTTCCATTTTTTGATGACAGTATCGCCATTGGCAGTTTTCGAGCAATGCAGCATGGCATCTCAGTCATTTGTGCAGCAGGAAACAATGGCCCAACTCAAAGCTCTGTCGCCAATGTAGCTCCTTGGATCACCACCATTGGTGCAGGCACGCTCGATCGAACATTCCCAGCTATAGTTCGACTAAGCAATGGCGAACCCATTCCCGGTGAATCAATGTACCCTGGAAACAAGTTCAATCAAGCTACCAAGGAGCTTGAGTTGGTTTACTTGACTGGAGGGCAAATGGGAAGTGAACTTTGCTTGAAAGGGTCTCTTCCACGAGAACAAGTAGAAGGAAAAATGGTGGTTTGCGACCGTGGCGTCAACGGCCGATCCGAAAAGGGGCAGATTGTGAAGGAATCTGGAGGAGCTGCTATGATCCTTGCAAATACAGAGATAAATCTGGAGGAAGACTTGGTCGATGTTCATGTTTTGCCGGCCACGTTGATCGGATTTGCGGAGGCGAATCGGTTAAAAGCTTACATTAACACAACAACCAATCCAAAAGCCAGAATCCAATTTGGAGGAACTGTGATAGGAAGAACAAGAGCTCCATCTGTAGCTCAGTTTTCATCAAGAGGACCAAGCCCCACAAATCCTTCAACGCTCAAACCTGATGTAATTGCTCCTGGGGTCAACATTATAGCAGCTTGGCCTCAAAACCTTGCTCCAACTGGCCTTCTAGAAGATTCTAGAAGGTCAAACTTCACTGTCATGTCAGGAACATCCATGGCTTGTCCCCATGTCAGTGGAATTGCAGCTCTAATCCAATCAGCTCATCCAAAATGGACACCGGCAGCTATCAAATCAGCCATCATGACAACCGCTGACGTTACCGATCGTTTCGGGAAACCGATTCTCGATGGCAACAAACCAGCTAGTGTTTTTGCAATGGGAGCTGGTCATGTAAACCCAACAAGAGCCATTGATCCTGGCTTGGTCTATGATATCAAGCCATTTGATTATGTCATTCATCTTTGTGTTCTTGGCTACACTCATTCAGAAATCTTCATCATTACCCACATGAATGTGAGCTGCCACAAAGTTCTTCAGATGAACAAAGGCTTCACTCTGAACTATCCCTCCATGGCTGTTGTTTTTAAGCACGGGACGACGAGTAAGATGGTTTCAAGACGGTTGACGAATGTCGGGAGCCCGAATTCCGTCTACGAAGTGGAAGTAACCGCGCCTGAAGGAGTGAGCGTTCGAGTTAAGCCTCGGCGCTTGGTGTTCAAACATGTGAACCAAAGTTTGAGTTATAAGGTATGGTTTATGTCTGAGAAGAGAAGAGAAGGAAGAAAGGTGAGCTCTACAGAAGGGCATTTGACATGGCTCCATTCTGAGAACAGTAAATACAGAGTAAGAAGCCCCATTGTAGTGACTTGGAAGAACTAA 2310 46.06 MDFNSQMVFSTIFLCFLWLQVQANASNLQTYMIQLHPQGLTSSVFESKLQWHLSFLEQTLSVEEDCSSRLLYSYSNAMEGFAAQLSETELEYLKKLPDVVAVRADRKYEIQTTYSHKFLGLSVCTQGVCYKSSMGQGAIVGVLDTGVWPESPSFSDSKMPPIPQKWRGGCQEGQDFNSSSCNRKLIGAKFFIKGHHVASSPPSDIVQEYVSPRDSHGHGTHTSSTAAGALVAGASVFGNGVGVAQGMAPGTHIAVYKVCWFSGCYSSDIVAAMDSAIRDGVDILSLSLGGFPLPFFDDSIAIGSFRAMQHGISVICAAGNNGPTQSSVANVAPWITTIGAGTLDRTFPAIVRLSNGEPIPGESMYPGNKFNQATKELELVYLTGGQMGSELCLKGSLPREQVEGKMVVCDRGVNGRSEKGQIVKESGGAAMILANTEINLEEDLVDVHVLPATLIGFAEANRLKAYINTTTNPKARIQFGGTVIGRTRAPSVAQFSSRGPSPTNPSTLKPDVIAPGVNIIAAWPQNLAPTGLLEDSRRSNFTVMSGTSMACPHVSGIAALIQSAHPKWTPAAIKSAIMTTADVTDRFGKPILDGNKPASVFAMGAGHVNPTRAIDPGLVYDIKPFDYVIHLCVLGYTHSEIFIITHMNVSCHKVLQMNKGFTLNYPSMAVVFKHGTTSKMVSRRLTNVGSPNSVYEVEVTAPEGVSVRVKPRRLVFKHVNQSLSYKVWFMSEKRREGRKVSSTEGHLTWLHSENSKYRVRSPIVVTWKN 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 695950 698259 - CmaCh19G001170.1 Cma19g00117 314805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00117 769 Pfam Fibronectin type-III domain 663 765 IPR041469 -
Cma19g00117 769 Pfam Peptidase inhibitor I9 30 110 IPR010259 -
Cma19g00117 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cma19g00117 769 Gene3D - 631 767 - -
Cma19g00117 769 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 25 766 - -
Cma19g00117 769 Gene3D Peptidase S8/S53 domain 138 627 IPR036852 GO:0004252|GO:0006508
Cma19g00117 769 CDD Peptidases_S8_3 108 582 IPR034197 -
Cma19g00117 769 ProSiteProfiles Serine proteases, subtilase domain profile. 113 614 - -
Cma19g00117 769 Pfam Subtilase family 135 606 IPR000209 GO:0006508|GO:0008236
Cma19g00117 769 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cma19g00117 769 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Cma19g00117 769 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Cma19g00117 769 Gene3D - 344 484 - -
Cma19g00117 769 Pfam PA domain 378 463 IPR003137 -
Cma19g00117 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Cma19g00117 769 SUPERFAMILY Subtilisin-like 131 619 IPR036852 GO:0004252|GO:0006508
Cma19g00117 769 CDD PA_subtilisin_like 351 477 - -
Cma19g00117 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 766 IPR045051 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g01716 Cma19g00117 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01498 Cma-Chr2:8558222 Cma19g00117 Cma-Chr19:695950 4.96E-136 dispersed
Cma19g00117 Cma-Chr19:695950 Cma04g00046 Cma-Chr4:233078 0 dispersed
Cma19g00117 Cma-Chr19:695950 Cma02g01716 Cma-Chr2:9666342 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00117 - - csv:101222839 1395.56