Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00125 ATGAGGAAGAGATTGGAGATTCAAATGGGAAGTGTCCTGGAACTTCTCGACTCAATGATCAAACAGAGGATGAAACAGCAGGAAATGGATCATGATTCTGTTCCAAACAATGATATGTTGCATTATCTTCTCAAGAACGAAGAGAGCGACGCCCAAATCGATCAAAATCAAATGATAAATTTACTTCTTGAATTGTTCGCAGCGGGCGCGGATACAACCGCAGCGACATTACAATGGGCAATGGCGGAGCTATTGAGGAATCCAGAAAAATTAGTGAAAGCACAAGAGGAAATCAAGCAAGTTGTGGGGAAGAACAAACCAGTGGATGAAGCGGACATTCCGAGGCTGCCATATCTACAAGCAGTAGTGAAGGAAGCTTTACAATTGCATCCAGCGGTTCCATTATTGCTACCTCGTACGGCGAAACAAGAAGTGGAGATCGAAGGTTTCACAATCCCTAAACATGCTCAGGTTCTGGTTAATGCATGGGCGATCGGAAAAGATCCGTTGAGCTGGGAGAATCCGGAATCATTCGAACCGGAGAGGTTTCTGGGATCAGAAATTGACGTCAGAGGGCAGAGCTTTGAGATGATTCCGTTCGGCGGAGGGAGAAGGATTTGCCCTAGACTGCCATTGGCTATGAGAATGATGCCTTTGATGTTGGGTTCGTTAATTAGAATCTTCGTCGGAAGAAAGTGGAAGAGCTCGTGGAGATTGTTCGAAAGAGCGCGTTGA 735 45.58 MRKRLEIQMGSVLELLDSMIKQRMKQQEMDHDSVPNNDMLHYLLKNEESDAQIDQNQMINLLLELFAAGADTTAATLQWAMAELLRNPEKLVKAQEEIKQVVGKNKPVDEADIPRLPYLQAVVKEALQLHPAVPLLLPRTAKQEVEIEGFTIPKHAQVLVNAWAIGKDPLSWENPESFEPERFLGSEIDVRGQSFEMIPFGGGRRICPRLPLAMRMMPLMLGSLIRIFVGRKWKSSWRLFERAR 244
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
19 742739 743581 + CmaCh19G001250.1 Cma19g00125 314813
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00125 244 SUPERFAMILY Cytochrome P450 3 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 Pfam Cytochrome P450 12 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 229 - -
Cma19g00125 244 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 229 - -
Cma19g00125 244 PRINTS P450 superfamily signature 198 207 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 PRINTS P450 superfamily signature 121 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 PRINTS P450 superfamily signature 68 85 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 PRINTS E-class P450 group I signature 207 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 PRINTS E-class P450 group I signature 77 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 PRINTS E-class P450 group I signature 57 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 PRINTS E-class P450 group I signature 197 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 PRINTS E-class P450 group I signature 161 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 PRINTS E-class P450 group I signature 120 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00125 244 Gene3D Cytochrome P450 1 238 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma19g00125 Cma-Chr19:742739 Cma15g01405 Cma-Chr15:8865390 1.13E-69 dispersed
Cma19g00125 Cma-Chr19:742739 Cma02g01713 Cma-Chr2:9641402 4.95E-127 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00125 - - cmax:111467087 433.721