Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00263 ATGGGGAAACGAATTCATTTCATCCCAATTCTTGTTTTAATTGCTTTCGTGTCGTTAGTTGGCTCAATGGCTGCAACCGTAGTTTCGAGCCGAGGTACTCGTGTTGGGTTCTACTCGACGACATGCCCACAAGTAGAGGCTATTGTTAGGGCAACTGTAAAGTCTCATTTTCGATTAGATTCAACCGTGGCTCCTGGGTTATTGAGAATGCACTTCCATGACTGCTTTGTACGAGGATGTGATGCTTCTGTGCTCCTTGTCGGTCCAAGCACGGAGAGAACAGCACTGCCCAACCTCTCTTTGAATGGATTTACGGTCATCAATGACGTCAAATCTCGCCTTGAACGTGCTTGTCCTGGCGTTGTCTCTTGTGCTGATATTCTTGCCCTAGCTGCTCGTGACTCGGTGGTTTTGACAAAAGGAGTGAGTTGGGCAGTGCCGACAGGACGTAGAGATGGAAGGGTTTCGTTGGCTTTGGAGGCTAACAATGCTCTACCTAATGTCAATGACACCATTCAAACTCAGAGGAAGTTATTCAAGAGCAAAGGTCTCAATATTCAAGATCTTGTCACTCTAGTTGGTGCACATACGATTGGAACCACAGCATGTAGCGTTTTCAAATATAGGCTCTACAATTTCAGCACCACGACAAGGAGTGGTGCAGATCCAGCCATGAACCCATCCTTTGTTCATCAGCTACGAACACTTTGCCCCAAAAATGGTGAAGGCTCACCCAATGTTGGATTGGACATAAGCACCCCCAACCAATTTGACACATCTTTCTTCTCAAACTTGAGGAATGGGCGTGGGGTCTTGGAGTCTGATCAGAAGCTGTGGAACGATCCCTCGACTCGGGCTTTTGTTCGACGTTTCTTGCTCAAAGGTTCGTTGGGTTTGAACTTTGACCTCGAGTTCGGGAAATCTATGGTTAAGATGAGCAACATTCATGTGAAAACCGGAACTCGAGGTGAAATTCGGAAGATTTGCACTATGGTTAACTAG 1002 46.41 MGKRIHFIPILVLIAFVSLVGSMAATVVSSRGTRVGFYSTTCPQVEAIVRATVKSHFRLDSTVAPGLLRMHFHDCFVRGCDASVLLVGPSTERTALPNLSLNGFTVINDVKSRLERACPGVVSCADILALAARDSVVLTKGVSWAVPTGRRDGRVSLALEANNALPNVNDTIQTQRKLFKSKGLNIQDLVTLVGAHTIGTTACSVFKYRLYNFSTTTRSGADPAMNPSFVHQLRTLCPKNGEGSPNVGLDISTPNQFDTSFFSNLRNGRGVLESDQKLWNDPSTRAFVRRFLLKGSLGLNFDLEFGKSMVKMSNIHVKTGTRGEIRKICTMVN 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1876371 1877950 + CmaCh19G002630.1 Cma19g00263 314951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00263 333 ProSiteProfiles Plant heme peroxidase family profile. 32 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Cma19g00263 333 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 CDD secretory_peroxidase 34 332 IPR033905 GO:0004601|GO:0042744
Cma19g00263 333 Gene3D Peroxidase, domain 2 166 312 - -
Cma19g00263 333 PANTHER PEROXIDASE 12 331 - -
Cma19g00263 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cma19g00263 333 SUPERFAMILY Heme-dependent peroxidases 34 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 Gene3D - 36 333 - -
Cma19g00263 333 Pfam Peroxidase 49 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00263 333 PANTHER PEROXIDASE 25-RELATED 12 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma19g00263 Cma-Chr19:1876371 Cma19g00277 Cma-Chr19:2006785 1.72E-90 dispersed
Cma19g00262 Cma-Chr19:1873105 Cma19g00263 Cma-Chr19:1876371 5.68E-151 tandem
Cma19g00263 Cma-Chr19:1876371 Cma19g00264 Cma-Chr19:1878536 8.10E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00263 K00430 - csv:101217567 445.277