Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00264 ATGGCGAAATCGGGTTATAGTCCAATGCTCGTTCTCGCTATCTCGATAGCGGTGGTGCTACTCACCTTCACGACCCCGGTCGTGCATGGCCAAGGCACTCGCTTAGGTTTCTACTCCAACTCTTGCCCTCAAGCCGAGTCCATCGTTGCATCTACTGTCCGATCTCATTTCCAATCCGACCCATCGATCGCACCTGGTTTGTTGAGAATGCATTTCCATGACTGTTTTGTTCGAGGTTGTGATGCCTCTGTACTCCTATCTGGCTCTAATAGTGAGAGGACTTCGCCTCCAAACCTTTCGTTAAAAGGGTTTGAGGTGATTGACGATGCCAAGACGCAGCTCGAAGCTGCTTGTCCTGGCATTGTATCTTGTGCGGATATTCTTGCACTTGCGGCTCGTGACTCCGTAGTTATGACGAGTGGATTGCGTTGGGGTGTGCCCACAGGACGAAGGGATGGCACGGTTTCAGTGGCGTCAGAAGCTAACGATTTACCTGGATTTACTGACTCCATTGATGTTCAAAAGAAGAAATTCAGCGATAAGGGTCTCAACACTCAAGATCTTGTGACTCTCGTGGGTGGACACACAATTGGCACCACACAATGCCAGTTTTTCAGCTACAGGCTCTTCAACTTCACTTCAAATGGTCCAGATTCAAGCATCAACCCAGCATTCGTGAGCCAATTGCAAGCCCTTTGCCCCCAGAACGGCGACGGCAGCCGCAGGGTTGGGTTGGACAACGGCAGCCCCAACAGGTTCGACACATCCTTCTTCTCAAACTTAAGGAATGGACGTGGGATCTTGGAGTCCGATCAAAAGCTATGGACCGATGCCTCCACTCGCACTTTGGTACAACGCTTTCTGGGTTTGAGAGGGCTGTTGGGTTTGACCTTCAACGCTGAGTTTGGGAAATCCATGGTTAAGATGGGTAACATTGAAGTTAAAACTGGAACTCAGGGAGAGATTCGTAAAGTTTGTTCTGTAGTTAACTAA 993 49.45 MAKSGYSPMLVLAISIAVVLLTFTTPVVHGQGTRLGFYSNSCPQAESIVASTVRSHFQSDPSIAPGLLRMHFHDCFVRGCDASVLLSGSNSERTSPPNLSLKGFEVIDDAKTQLEAACPGIVSCADILALAARDSVVMTSGLRWGVPTGRRDGTVSVASEANDLPGFTDSIDVQKKKFSDKGLNTQDLVTLVGGHTIGTTQCQFFSYRLFNFTSNGPDSSINPAFVSQLQALCPQNGDGSRRVGLDNGSPNRFDTSFFSNLRNGRGILESDQKLWTDASTRTLVQRFLGLRGLLGLTFNAEFGKSMVKMGNIEVKTGTQGEIRKVCSVVN 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1878536 1880819 - CmaCh19G002640.1 Cma19g00264 314952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00264 330 Pfam Peroxidase 49 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Cma19g00264 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cma19g00264 330 PANTHER PEROXIDASE 17 328 - -
Cma19g00264 330 Gene3D Peroxidase, domain 2 165 309 - -
Cma19g00264 330 Gene3D - 36 330 - -
Cma19g00264 330 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 SUPERFAMILY Heme-dependent peroxidases 34 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PANTHER PEROXIDASE 25-RELATED 17 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 ProSiteProfiles Plant heme peroxidase family profile. 32 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 CDD secretory_peroxidase 34 329 IPR033905 GO:0004601|GO:0042744
Cma19g00264 330 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma19g00264 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00549 Cma-Chr10:2522741 Cma19g00264 Cma-Chr19:1878536 2.43E-128 dispersed
Cma17g01003 Cma-Chr17:7333465 Cma19g00264 Cma-Chr19:1878536 2.03E-86 dispersed
Cma18g00648 Cma-Chr18:5907554 Cma19g00264 Cma-Chr19:1878536 1.61E-81 dispersed
Cma19g00262 Cma-Chr19:1873105 Cma19g00264 Cma-Chr19:1878536 7.57E-157 dispersed
Cma19g00264 Cma-Chr19:1878536 Cma19g00277 Cma-Chr19:2006785 1.85E-96 dispersed
Cma19g00263 Cma-Chr19:1876371 Cma19g00264 Cma-Chr19:1878536 8.10E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00264 K00430 - csv:101217567 537.724