Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00538 ATGGCAACCTCAGGCCAGTCGCTCCGCTCTTCCACCGCTGCCTCTAGTGGAGGAAACTTCGACTTGCTTAATCGTATCCTAGCCGACCTCTGCACTCGCGGTCATTCAAAGGAGGGGGCTCCATTAGCATTAAAGAAACATATTGAAGAAGCAGCTCGTGATCTTACTGGGGAAGCATTTTCCCGGTTCATGGATCAATTATATGATCGTATTTCTATTCTTTTAGAAAGTAACGATGTACCTGAAAATTTGGGAGCTTTGAGGGCTATTGATGAGTTGATTGATGTGGCTCTGGGTGAAAATGCTTCAAAAGTTTCGAGGTTTTCTAATTATATTAGGAATGTATTTGAGCTGAAGCGTGATCCTGAAATTTTGGTACTTGCTAGCCGAGTTTTGGGTCATCTAGCTAGGGCAGGTGGAGCAATGACAGCAGATGAAGTTGAACGCCAGGTAAAAATTGCTTTGGACTGGTTGCGCGGGGAAAGGATCGAGTATCGTCGCTTTGCTGCTGTCTTAATTCTGAAGGAAATGGCAGAAAGTGCTTCGACAGTCTTCAATGTGCATGTACCAGAATTTGTTGATGCCATTTGGGTTGCTTTGAGGGATCCACAGCTGGCTGTTCGGGAGCGTGCTGTAGAGGCATTGCGTGCTTGCCTTCGTGTCATTGAAAAGCGAGAGACGCGTTGGCGTGTGCAATGGTACTATCGAATGTTTGAAGCCACACAAGATGGGTTGGGTAAAAATGCTCCTGTTCACAGCATACATGGTTCCTTACTTGCAGTTGGTGAACTTTTGAGGAATACCGGTGAATTTATGATGTCAAGATATAGAGAAGTTGCTGATATTGTCCTTAGGTACCTGGATCACCGAGATCGTCTTGTACGATTGAGCATAACTTCATTATTACCTCGAATTGCTCATTTTTTACGTGATAGATTTGTGACAAACTATTTAACGATATGCATGAATCATATTCTCACTGTTTTGAGAACACCAGCTGAGCGTGCCAGTGGGTTCATTGCGCTTGGAGAGATGGCTGGTGCTTTAGATGGGGAACTCAAACACTATTTGCCGACCATAACACATCACTTACGTGATGCAATTGCTCCTCGTCGTGGTAGACCCTCACTCGAGGCGTTGGCTTGTGTTGGAAGCATTGCAAAAGCCATGGGGCCTGCTATGGAATCTCATGTTCGGGGTCTCCTGGATGTTATGTTCTCAGCTGGTTTGTCCCCTACACTTGTAGAATCTCTGGAGCAAATTACTATCAGTATTCCCTCCTTGCTTCCCAGTATTCAAGAGCGGCTTTTAGAATGCATTTCAGTGGTTCTATCAAAATCACATTCTCCTCAGGGTAGGCCAAATGCTTTGGTGGGAAGGGGAAATGTGATGACAGTTCCTCAGCCAGTGTCAGATCTTTGTGGTTCATCTCTTGTGCAGCTTGCATTGCAAACACTTGCTCGTTTTAACTTTAAGGGTCACGACCTTCTTGAGTTTGCACGGGAGTCAGTCATTGTGTATCTGGATGATGAAGATGGAGCAACACGTAAAGATGCTGCCCTATGTTGTTGTAAATTAGTTGCAAATTCCTTTTCCATCATGACATGCACACAATTTGGTACTAGTAGGCCTAGTCGCGCAGGTGGGAAACGTTGCTGCCTTGTTGAGGAGCTTGTGGAAAAGCTTCTTATTGCAGCTGTTGCAGATGCTGATGTTACTGTTCGCAATTCCATCTTTGTTTCTCTACATGGGAATAGGGGTTTTGACGATTTTATAGCACAGGCTGATAGTCTGAGTGCAGTATTTGCTGCACTTAATGATGAGGATTTTGATGTTCGAGAGTATGCAATATCTGTCGCTGGGAGATTATCTGAAAAAAATCCTGCATATGTTCTTCCAGCACTTCGTCGCCATCTTATACAATTGTTAACCTATTTGGACCAGAGTGCAGATAATAAATGCCGAGAAGAAAGTGCGAAGTTGTTGGGTTGCTTGATACGCAATTGTGAACGATTAATACTTCCTTACATTGCTCCAGTCCACAAGGCACTTGTGGCAAGGCTTAGCGAGGGCACTGGGGTGAATGCTAATAATGGCATTATCACTGGAGTTCTGGTTACTGTTGGAGATCTTGCTAGAGTGGGTGGTTTTGCAATGAGACAATACCTCCCTGAACTCGTGCCGTTGATTGTTGAAGCCCTGTTGGACGGAGCTGCTGTTGCAAAACGTGAAGTGGCTGTCTCTACCCTTGGTCAAGTTGTTCAGAGCACAGGGTATGTTATAACTCCGTACAATGAGTACCCGTTGTTGCTTGGCCTGCTGTTAAAATTGCTTAATGGTGAGCTAGCTTGGTCTACTAGACGTGAAGTTTTAAAGGTTCTAGGAATAATGGGTGCTCTGGATCCTCATGTGCACAAAAGGAACCAACTAAGTTTGCCAGGGTCTCATGGAGAAGTTACACGTGCAGCAAGTGATTCTGGTCAACATATTCAATCTGTGGATGAACTTCCTATGGAGCTGTGGCCCTCGTTTGCAACATCCGAGGATTATTTTTCCACGGTGGCAATTAATTCACTCTTAAGAATACTTCGGGATCCTTCCCTTGCGAGTTATCATCTTAAGGTGGTTGGATCGCTTATGTTCATATTCAAGTCTATGGGCCTCGGTTCTGTTCCATACTTACCCAAGGTTTTGCCCGATCTGTTCCACACTGTTAGTACATGTGATGATACTTTGAAGGACTTCATAACGTGGAAACTTGGAACTCTAGTGTCTATTGTCCGCCAGCACATTCGCAAATATTTACCTGAATTGCTCTCTCTTATATCAGAATTGTGGTCATCCTTCAATTTTCCCTCTACCATTCGTCCTCCGCTTGGCTATCCGGTTCTTCACTTAGTGGAACAACTTTGTTTAGCTCTCAATGATGAGTTCAGAATGATTCTTCACATTATTCTTCCTTGTTGTATTCAAGTACTAAGTGATGCTGAGCGGTGTAATGATTATACCTATGTTCTTGATATTCTTCACACTCTTGAAGTTTTTGGGGGCACATTGGACGAACATATGCATCTTCTTCTTCCTGCACTCATTCGTTTATTCAAGGTGGATGCTCCAGTAGACATAAGACGTGCTTCAATCAGAACTTTGACAAGATTAATCCCTCGTGTGCAGGTAACTGGCCATATATCTTCTCTTGTGCATCACCTCAAGCTTGTCTTGGATGGGAAGAATGATGAGCTCCAAAAGGATGCCGTTGATGCACTTTGTTGCCTAGCCCAGGCTCTTGGGGAAGATTTCACTGTTTTTATTCCATCAATACACAAGCTCCTATTGAAACATCGCTTGCGGCATAAAGAATTTGAGGAAATTGAGGGACGTTTACGAAGACGAGAGCCACTGATCTTGGGGAGCACTACTGCTCAACGGTTGAGTCGGCGAGTTCCAGTGGAAGTCATCAGTGATCCTCTAAATGATGGTGACTTTGACCCTTATGAAGATAGGTCTGATGTGCATAAACAGTTTAGAGGTCACCAGGTTAATGATGGCCGATTGCGCACTGCTGGAGAGGCTTCCCAGCGAAGTACTAAGGAAGATTGGGCTGAATGGATGAGGCATTTCAGCATTGAGCTTCTTAAGGAATCACCTTCACCTGCATTACGGACCTGTGCAAGACTTGCGCAGCTGCAGCCTTTTGTCGGGCGTGAGTTATTTGCAGCTGGTTTTGTTAGCTGTTGGGCACAATTAAACGAGACAAGTCAGACACAATTAGTCCGGAGCTTGGAGATGGCCTTTTCCTCCCCAAATATTCCTCCTGAAATTTTGGCGACCCTTCTTAACCTGGCGGAGTTTATGGAACATGATGAGAAGCATCTTCCTATTGACATTCGTCTTCTTGGTGCTCTTGCAGAGAAGTGTCGTGCATTCGCCAAAGCTCTGCATTACAAAGAAATGGAATTTAGGGATGCGAGTACCAAGAAGATGGATACCAATCCTGTTGCTGTAGTGGAAGCACTTATTCATATAAACAATCAGTTGCACCAACATGAGGCTGCTGTCGGAATATTGACATATGCTCAACAACATCTGGGGGTTCAGCTGAAAGAGTCCTGGTATGAGAAGCTGCAACGTTGGGAAGATGCTCTTAAGGCATATACTGCCAAGGCATCCCAAGCATCAAATCCACATCTTGTATTAGACGCCATGTTAGGACGGATGAGATGCCTTGCTGCATTGGCTCGATGGGAAGAGCTTAATAACCTATGCAAGGAGTATTGGACCCCTGCCGAGCCAGCTGCTCGGCTAGAAATGGCTCCAATGGCTGCAAGTGCTGCATGGAACATGGGAGAGTGGGACCAAATGGCAGAATATGTTTCTCGGTTAGATGATGGTGATGAAACCAAACTTCGTAGCTTGGGTAACACTGCTGCTAGTGGTGATGGAAGCAGTAGTGGAACTTTCTATAGGGCTGTCTTATTAGTTCGTAAAGGAAAGTATGATGAAGCACGTGAGTATGTTGACAGAGCTAGAAAATGTTTAGCAACAGAACTTGCTGCTTTGGTACTGGAGAGTTATGAGCGTGCTTATAGCAATATGGTCAGAGTTCAGCAACTTTCAGAACTAGAGGAGGCAACGGTTATTGATTACTGCACACTTCCTGTTGGGAATTCCGTTGCTGAAGGACGACGAGCTCTTATTAGAAATATGTGGACAGAACGCATACAAGGAGCAAAACGGAATGTTGAGGTCTGGCAAGCAGTATTGGCTATTAGAGCCCTTGTGCTGCCTCCAACAGAAGATATTGAGACATGGCTAAAGTTTGCTTCTCTTTGTCGGAAAAGTGGGAGAGTCAGCCAGGCAAGATCTACTCTTGTTAAGCTCTTACAGTACGATCCTGAAACATCTGAAAATGGATGGTATTCTGGGCCACCTCAAGTAATGTTTGCATACTTGAAATACCAATGGTCACTTGGGGAGGATATTAAACGCAAGGAAGCATTTGCTAGGTTACAAGTTTTGTCTAGGGAGCTATCATCTTCACCTATTATCCAACCTGTCAAACCAAGTAGCTTATCAAGTGGTAGAAGTTCAACTGCACCACTGCTTGCTCGTGTATGCCTTGAACTTGGAACCTGGCAATGGGCCCTATCTCCTGGATTAGATGATGATTCTATACAAGAAATTCTGACCGCATTTCAGAATGCCACCCAGTGTGCGAATACTTGGGCAAAGGCATGGCATATGTGGGCGTTGTTTAATACAGCCGTGATGTCTCATTATACAATGAGAGGATTTCCTGATGTTGCGGCACAGTTCGTTGTTGCTGCAGTTACAGGATATTTTCACTCTATAGCATGTGCTGCAAATTCTAAAGGTGTTGATGACAGTTTACAGGATATCCTCCGTCTTCTCACTTTATGGTTCAACCATGGAGCTACTGCAGATGTCCAAATGGCACTACAAAAAGGGTTTACTCATGTAAATATCAACACATGGCTGGTAGTTTTACCTCAGATAATTGCAAGGATACATTCAAATAACCATGCAGTAAGAGAACTCATACAGTCACTATTGGTTCGAATTGGGCAAAGTCATCCTCAGGCCCTCATGTACCCTCTCCTTGTAGCATGTAAATCAATTAGCAATTTACGGCGAGCTGCAGCTCAAGAAGTTGTTGACAAAGTTAGACAACATAGTGGTGTTCTTGTTGATCAGGCTCAACTTGTTTCTAAAGAATTGATTCGAGTTGCCATACTTTGGCATGAAACATGGCATGAGGCTCTAGAGGAAGCCAGTCGTTTGTACTTTGGTGAACATAATATTGAGGGGATGCTCAAGGTTTTGGAGCCCTTGCATGAAATGCTTGAAGAAGGGGCTATGAAGAATAACACAACGATAAAGGAAAGGGCATTCATTGAGGTTGCATATCGCCGCGAGTTGCTTGAAGCCTATGAATGTTGCATGAAATATAAGAAAACCGGGAAAGATGCTGAACTTACTCAGGCTTGGGATCTGTATTACCATGTATTTAGAAGAATAGATAAGCAACTTCAGAGCCTTACAACTCTGGACCTTCAGTCTGTTTCACCAGAGTTACTAGAATGTCGTAATCTGGAGCTTGCTGTTCCGGGTACTTATCGTGCAGAGTCACCTGTCGTGACAATTGCATCATTTGCAACCCAGCTTGTTGTGATAACATCAAAACAGCGGCCCCGAAAGTTAACAATTCATGGAAGTGATGGCGAGGATTATGCATTCTTACTGAAGGGGCACGAAGACTTGCGGCAAGATGAGCGTGTCATGCAGCTTTTTGGTTTGGTTAATACTTTGCTGGACAATTCAAGAAAAACTGCTGAAAAAGATCTTTCCATTCAACGGTATGACGTCATTCCACTATCGCCAAATAGTGGATTGATTGGTTGGGTCCCACATTGTGACACCCTGCATCAACTTATCCGTGAGTATAGAGATGCTAGGAAGATAACCTTGAACCAAGAGCACAAATACATGCTTAGTTTTGCCCCCGATTATGATCATTTACCACTCATAGCTAAAGTGGAAGTGTTTGAGTATGCATTACACAATACCGAAGGAAATGACCTTTCAAAGGTTCTATGGTTGAAAAGTCGCACATCTGAGGTATGGTTAGAGAGGAGGACAAATTATACCCGAAGTTTGGCAGTCATGAGTATGGTTGGTTACCTTCTTGGTTTGGGTGATCGACACCCAAGTAACCTTATGCTGCACCGTTATACTGGTAAGATCTTGCACATTGATTTTGGCGATTGTTTTGAAGCTTCAATGAACAGAGAAAAGTTTCCTGAGAAGGTACCCTTCCGATTGACTAGAATGCTTGTCAAAGCTATGGAGGTTAGTGGTATAGAGGGAAACTTCCGTTCCACTTGTGAAAATGTGATGCAGGTTCTTCGATCAAACAAGGATAGTGTTATGGCTATGATGGAGGCTTTTGTTCACGACCCTCTCATAAATTGGCGTCTTTTCAACTTCAATGAAGTCCCTCAAATGTCGATGTTTTCGAGCACTCATGCTCCTCCGGTTGTGAATGCTGAAGATTCTGCTCAAAGTCGTGAACTTCTTCAACCTCAACGAGGTGCTCGTGAAAGAGAGCTTCTTCAGGCTGTTAATCAACTTGGTGATGCCAACGAGGTCTTGAATGAGCGTGCTGTTGTTGTGATGGCTCGTATGAGCAATAAACTAACTGGACGGGATTTCCCCACTTGTTCGTCTATGTCGACTGCTTCTGTTCAGCTTGCAGTAGACCACAGCACCTTAATAGCTGGGGATTCCCGTGAAGTTGATCATGGTCTCTCTGTTAAGGTTCAAGTTGAGAAGTTGATTGGCCAAGCTACATCGCACGAAAACTTATGTCAAAACTACGTCGGGCAAATGCCTTCCCTTGATCTTGAAGATTCAATACATGTG 7443 44.1 MATSGQSLRSSTAASSGGNFDLLNRILADLCTRGHSKEGAPLALKKHIEEAARDLTGEAFSRFMDQLYDRISILLESNDVPENLGALRAIDELIDVALGENASKVSRFSNYIRNVFELKRDPEILVLASRVLGHLARAGGAMTADEVERQVKIALDWLRGERIEYRRFAAVLILKEMAESASTVFNVHVPEFVDAIWVALRDPQLAVRERAVEALRACLRVIEKRETRWRVQWYYRMFEATQDGLGKNAPVHSIHGSLLAVGELLRNTGEFMMSRYREVADIVLRYLDHRDRLVRLSITSLLPRIAHFLRDRFVTNYLTICMNHILTVLRTPAERASGFIALGEMAGALDGELKHYLPTITHHLRDAIAPRRGRPSLEALACVGSIAKAMGPAMESHVRGLLDVMFSAGLSPTLVESLEQITISIPSLLPSIQERLLECISVVLSKSHSPQGRPNALVGRGNVMTVPQPVSDLCGSSLVQLALQTLARFNFKGHDLLEFARESVIVYLDDEDGATRKDAALCCCKLVANSFSIMTCTQFGTSRPSRAGGKRCCLVEELVEKLLIAAVADADVTVRNSIFVSLHGNRGFDDFIAQADSLSAVFAALNDEDFDVREYAISVAGRLSEKNPAYVLPALRRHLIQLLTYLDQSADNKCREESAKLLGCLIRNCERLILPYIAPVHKALVARLSEGTGVNANNGIITGVLVTVGDLARVGGFAMRQYLPELVPLIVEALLDGAAVAKREVAVSTLGQVVQSTGYVITPYNEYPLLLGLLLKLLNGELAWSTRREVLKVLGIMGALDPHVHKRNQLSLPGSHGEVTRAASDSGQHIQSVDELPMELWPSFATSEDYFSTVAINSLLRILRDPSLASYHLKVVGSLMFIFKSMGLGSVPYLPKVLPDLFHTVSTCDDTLKDFITWKLGTLVSIVRQHIRKYLPELLSLISELWSSFNFPSTIRPPLGYPVLHLVEQLCLALNDEFRMILHIILPCCIQVLSDAERCNDYTYVLDILHTLEVFGGTLDEHMHLLLPALIRLFKVDAPVDIRRASIRTLTRLIPRVQVTGHISSLVHHLKLVLDGKNDELQKDAVDALCCLAQALGEDFTVFIPSIHKLLLKHRLRHKEFEEIEGRLRRREPLILGSTTAQRLSRRVPVEVISDPLNDGDFDPYEDRSDVHKQFRGHQVNDGRLRTAGEASQRSTKEDWAEWMRHFSIELLKESPSPALRTCARLAQLQPFVGRELFAAGFVSCWAQLNETSQTQLVRSLEMAFSSPNIPPEILATLLNLAEFMEHDEKHLPIDIRLLGALAEKCRAFAKALHYKEMEFRDASTKKMDTNPVAVVEALIHINNQLHQHEAAVGILTYAQQHLGVQLKESWYEKLQRWEDALKAYTAKASQASNPHLVLDAMLGRMRCLAALARWEELNNLCKEYWTPAEPAARLEMAPMAASAAWNMGEWDQMAEYVSRLDDGDETKLRSLGNTAASGDGSSSGTFYRAVLLVRKGKYDEAREYVDRARKCLATELAALVLESYERAYSNMVRVQQLSELEEATVIDYCTLPVGNSVAEGRRALIRNMWTERIQGAKRNVEVWQAVLAIRALVLPPTEDIETWLKFASLCRKSGRVSQARSTLVKLLQYDPETSENGWYSGPPQVMFAYLKYQWSLGEDIKRKEAFARLQVLSRELSSSPIIQPVKPSSLSSGRSSTAPLLARVCLELGTWQWALSPGLDDDSIQEILTAFQNATQCANTWAKAWHMWALFNTAVMSHYTMRGFPDVAAQFVVAAVTGYFHSIACAANSKGVDDSLQDILRLLTLWFNHGATADVQMALQKGFTHVNINTWLVVLPQIIARIHSNNHAVRELIQSLLVRIGQSHPQALMYPLLVACKSISNLRRAAAQEVVDKVRQHSGVLVDQAQLVSKELIRVAILWHETWHEALEEASRLYFGEHNIEGMLKVLEPLHEMLEEGAMKNNTTIKERAFIEVAYRRELLEAYECCMKYKKTGKDAELTQAWDLYYHVFRRIDKQLQSLTTLDLQSVSPELLECRNLELAVPGTYRAESPVVTIASFATQLVVITSKQRPRKLTIHGSDGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLDNSRKTAEKDLSIQRYDVIPLSPNSGLIGWVPHCDTLHQLIREYRDARKITLNQEHKYMLSFAPDYDHLPLIAKVEVFEYALHNTEGNDLSKVLWLKSRTSEVWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLHRYTGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRSNKDSVMAMMEAFVHDPLINWRLFNFNEVPQMSMFSSTHAPPVVNAEDSAQSRELLQPQRGARERELLQAVNQLGDANEVLNERAVVVMARMSNKLTGRDFPTCSSMSTASVQLAVDHSTLIAGDSREVDHGLSVKVQVEKLIGQATSHENLCQNYVGQMPSLDLEDSIHV 2481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6177231 6217155 + CmaCh19G005380.1 Cma19g00538 315226

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00538 2481 Coils Coil 1368 1388 - -
Cma19g00538 2481 SMART DUF3385_3 760 928 IPR024585 -
Cma19g00538 2481 Gene3D - 2013 2140 - -
Cma19g00538 2481 Gene3D - 1915 2012 IPR036738 GO:0044877
Cma19g00538 2481 CDD PIKKc_TOR 2055 2333 - -
Cma19g00538 2481 Gene3D - 238 457 IPR011989 -
Cma19g00538 2481 SUPERFAMILY TPR-like 1372 1634 IPR011990 GO:0005515
Cma19g00538 2481 Gene3D - 1003 1125 IPR011989 -
Cma19g00538 2481 SUPERFAMILY FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 1916 2014 IPR036738 GO:0044877
Cma19g00538 2481 Pfam Domain of unknown function (DUF3385) 760 928 IPR024585 -
Cma19g00538 2481 SUPERFAMILY ARM repeat 334 1421 IPR016024 -
Cma19g00538 2481 Pfam FAT domain 1438 1805 IPR003151 GO:0005515
Cma19g00538 2481 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 5 2470 - -
Cma19g00538 2481 PANTHER SERINE/THREONINE-PROTEIN KINASE TOR 5 2470 IPR026683 GO:0004674
Cma19g00538 2481 Pfam Phosphatidylinositol 3- and 4-kinase 2084 2332 IPR000403 -
Cma19g00538 2481 ProSiteProfiles FATC domain profile. 2441 2473 IPR003152 GO:0005515
Cma19g00538 2481 Gene3D - 2184 2351 IPR036940 GO:0016301
Cma19g00538 2481 SUPERFAMILY ARM repeat 42 527 IPR016024 -
Cma19g00538 2481 SMART Rapamycin_bind_3 1912 2016 - -
Cma19g00538 2481 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 2225 2245 IPR018936 GO:0016301
Cma19g00538 2481 Gene3D - 62 232 IPR011989 -
Cma19g00538 2481 Gene3D - 541 691 IPR011989 -
Cma19g00538 2481 SUPERFAMILY Protein kinase-like (PK-like) 1998 2337 IPR011009 -
Cma19g00538 2481 Pfam FATC domain 2443 2471 IPR003152 GO:0005515
Cma19g00538 2481 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 2088 2102 IPR018936 GO:0016301
Cma19g00538 2481 ProSiteProfiles FAT domain profile. 1298 1879 IPR014009 -
Cma19g00538 2481 SMART FATC_2 2441 2473 IPR003152 GO:0005515
Cma19g00538 2481 Gene3D Tetratricopeptide repeat domain 1190 1751 IPR011990 GO:0005515
Cma19g00538 2481 Pfam FKBP12-rapamycin binding domain 1912 2015 IPR009076 GO:0044877
Cma19g00538 2481 Gene3D - 692 804 IPR011989 -
Cma19g00538 2481 Gene3D - 844 998 IPR011989 -
Cma19g00538 2481 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 2058 2375 IPR000403 -
Cma19g00538 2481 SMART pi3k_hr1_6 2085 2405 IPR000403 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00538 K07203 MTOR, FRAP, TOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1] - csv:101212051 4657.43
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma19g00538 Cma-Chr19:6177231 Cma20g00881 Cma-Chr20:4216463 6.80E-62 dispersed
Cma19g00538 Cma-Chr19:6177231 Cma11g00094 Cma-Chr11:460913 1.02E-45 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g774 . . . . . Bpe12g00734 . . Cmo19g00552 . . . . . . . Cpe15g00427 Bhi05g01001 . . . . . . Cla02g00700 Cam02g0733 Cec02g0747 Cco02g0772 Clacu02g0744 Cmu02g0739 Cre02g1052 Cone12ag1029 . . . Lsi03g00601 Csa07g00668 . Cme01g00136 . Blo13g00276 Bda15g00469 . . . . Bma08g00017 . . . . Cma19g00538 . Car19g00395 . . . . . . . . . . . . . . . . . . Chy01g00147 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006863 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 2 1 1 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma19g00538 Cma_Chr19 FPKM 17.795099 19.008801 20.898832 19.415485 20.823244 21.916321 21.070873 21.251076 17.715574 19.029045