Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00602 ATGGGTATGTTATCAAAGCAAAAAATCTGTAGAACAGGAACGACCCATAATGATTCGATGGGTTTTAATGGGGTTTCTCCAGCAAGCAAGTGGAAATGGACCCATTTCTTGCCTCTGTTTGTAGCGATGGTGGTCATAGCAGAGATCGCTTCTCTAAGTCGGCTCGATATCGCGAAAAATGCGGCTATGGTGGACTCTTGGGTCGACTTATTCTATGGACCTCCGCCTTTGCAAGAAGAAATCGAAGATGTTAGCACTGGAATCACAATTGATGGAGTAATGGGTAGAGTTAACTGTGAGGAGTGGCTGGAGAAGGTGGATGCGGTGGAGTACTCTAGGGACTTCAAAAGGAAACCTGTTTTGGTTTCTGGGTCCGAGAAGGATTGGAAAACTTGTGATGTGGGATGCCAGTTTGGATTGAATCCTGGTGAGCAGCCTGATGCTGCATTGGGATCACCTCAACAAGGTCATGTTGCTAGCGTCCTTCGTTCGATGGAATCGTCGCATTACTATCCAGAGAACAATATTGCTTTGGCAAGACGGAAGGGTTACACTGTGGTTATGACCACTAGTCTTTCATCAGACGTTCCTGTTGGATATTTTTCGTGGGCAGAATACGACATAATGGCACCAGTTCAACCAAAGACTGAGCCTGCCCTTGCAGCTGCCTTCATTTCGAATTGTGGCGCCCGCAACTTTCGTTTGCAAGCTCTTGAAGCACTTGAGAAATTTGATGTCAAAATTGATTCTTATGGTAGTTGCCACAGGAACCGCGATGGAAGAGTTGACAAAGTGGAAACTTTGAAGCGCTACAAGTTCAGCTTGGCTTTTGAGAATTCCAATGAGGAAGATTATGTCACAGAGAAGTTTTTTCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTTGGTACTCCAAATATCAAGGAGTTTGCTCCTTCTCCTGATTCATATTTGCATATCAAGGAAATTTCCGATGTCGAGTCGGTTGCCAAGTCGATGAAATACCTCGCAGAAAATCCCAAAATGTACAACCAATCACTAAGATGGAAGTATGATGGTCCGTCCGATTCGTTCAAGGCCCTTGTCGATATGGCAGCAGTACACTCATCGTGCCGCCTTTGCATCCACTTGGCAACCATCATCCACGAGAAAGAAGAAAACAGTCCCGAGTTCAAGAAACGACCGTGCAAGTGCTCTCATGGCTCCGAAACGGTGTATCATTTATACGTAAGGGAGAGAGGGCGGTTTGAAATGCAATCCATTTTCTTGAGGTCGGGAAATTTAACGTTGGGGGCTTTAGAATCGAGAGTACTCGAAAAGTTCAAGTCTTTGAAACATGTCCCAATTTGGAAGCAAGAACGGCCTGAAAGCTTAAGAGGAGGAGATGAACTAAAGCTATATAGGATATATCCTGTTGGGTTGACACAGAAGCAGGCTTTATATACCTTCAGATTCAAAGGTAATGATGATTTCAAAACTCACATAGAAACACACCCTTGTGCTAAGATGGAAATCATATTTGTCTGA 1530 44.38 MGMLSKQKICRTGTTHNDSMGFNGVSPASKWKWTHFLPLFVAMVVIAEIASLSRLDIAKNAAMVDSWVDLFYGPPPLQEEIEDVSTGITIDGVMGRVNCEEWLEKVDAVEYSRDFKRKPVLVSGSEKDWKTCDVGCQFGLNPGEQPDAALGSPQQGHVASVLRSMESSHYYPENNIALARRKGYTVVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTEPALAAAFISNCGARNFRLQALEALEKFDVKIDSYGSCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGTPNIKEFAPSPDSYLHIKEISDVESVAKSMKYLAENPKMYNQSLRWKYDGPSDSFKALVDMAAVHSSCRLCIHLATIIHEKEENSPEFKKRPCKCSHGSETVYHLYVRERGRFEMQSIFLRSGNLTLGALESRVLEKFKSLKHVPIWKQERPESLRGGDELKLYRIYPVGLTQKQALYTFRFKGNDDFKTHIETHPCAKMEIIFV 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6599899 6605384 + CmaCh19G006020.1 Cma19g00602 315290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00602 509 Gene3D - 166 357 IPR038577 -
Cma19g00602 509 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 219 381 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cma19g00602 509 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 104 385 - -
Cma19g00602 509 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 33 486 - -
Cma19g00602 509 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 33 486 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma16g00355 Cma-Chr16:1681365 Cma19g00602 Cma-Chr19:6599899 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00602 K00753 - csv:101205170 909.827