Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00605 ATGGAGGCTCTCTCTGTTCCTCTCTACATTATAATATCTCTCTTTCTTTTAGCTTTCTTTTCCATTTCATTTCTAAAGAGAAATGAACAGCCAAAATCCCAAGAAGCTCTTAAGCTTCCTCCTGGTTCCATGGGTCTGCCATGGTTTGGAGAAACTCTGCAGCTTTATTCTCAAGATCCCAACATATTTTTCTCAGAAAAACAGAGGAGATTTGGGGAGATTTTTAAGACCAACATTTTGGGATGTCCTTGTGTGATGTTGGCAAGCGCCGCCGCTGCCCGGTTTGTTTTGGTGACCAACGCCCATTTATTCCGGCCGACTTACCCCAAAAGCAAAGAGACTCTGATCGGCCCGGCGGCGCTTTTCTTCCATCAGGGTAACTACCATTCTAACCTCAGGAAGCTTGTTCAAAATTCTCTCTCTCTTCAACGCCTCAGAACTACTCTTGTTCCTCATATTGAAGCCGCCGCCATTTCCGCCGCCGATTCTTGGGCCGCCACCGCCCATGTCTTCTCTTTCGAGGTAGCGATTGTGGCCGTGTTTGGTAAGCTAGAAACTCACTATAGCGAGAAGCTGAAAGAAAATTACTGCATATTAGACAAAGGCTACAACTCGTTTCCGACCAGACTACCGGGAACAGCATGTTCAAAAGCATTATCAGCGAGGAAGAAGCTGAGAGAGATTCTGAGAGAGATAATTGTGGAGCGGAGAGAGAAAGAGGAGGCGGAGAGAGATTTTGTGGGTCAGCTTTTGAGCTACAGAGATGAAAATGGAGAGAGATTGAGTGAGGAACAGATCGCCGACAACGTCATCGGAGTTCTGTTTGCGGCACAGGACACGACGGCGAGTGTTCTGACATGGATTCTGAAGTATCTTCATGACAGTTTTAAGCTGTTTGAGGCTGTCAGGGCAGAGCAGATGGAAATTTATAGAAGAAATGGAGAGGGGAAGATGCCCCTGTCATGGGCTCAGATTAAGGACATGCCCTTTACTCATAGGGTTGTATTAGAGAGCTTGAGGATGGCTAGCATCATATCCTTCACCTTTAGGGAGGCAGTGGTTGACGTGGAATATAAAGGGTACCGTATACCAAAGGGATGGAAGGTCATGCCCTTGTTCAGGAATATTCATCACAACCACGACTACTTCAATGATCCTCATACTTTCGATCCCTCTAGATTTGAGGTAGCTCCACGACCCAATACGTTCATGCCATTTGGTAATGGAGTACATTCTTGCCCGGGGAACGAACTTGCCAAGCTAGAGATCCTCATCTTACTTCATCACCTCGTGACCAAATTTAGTGGTGGCATCGTCGGTGGTAATGGCGTCGATGTTGTCAAGCTTCAAAGGTTTGCCATTTGGCTGTTGAACAAAGGAGCTGCTCCACTGAAACTTGATGAGGCTACCCAGTCAAAGATTGTAAAATGTTCGGAATCAATGTGGAAACTAGCATACTATGGAACTGTTGAAATATGCGTTCTAAAAATTGCATACAACCAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATGCGGAGTTGCAATTTTTCCAGATTGGATCGGTTATTCTTGCGCTCCATGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAGAATGAACTTGGAGCAAGCGTCTTCTTTGGATGTTTTGCCATTTCATGGCTCATATTGCGGCTTATATTCTTTCCATTCTGGGTTATAAAAGCAACAAGTTATGATCTCTGTGAGTACTTGAAGCTATCAGATGTGAATTCCAGATCGATATACTATGTTTTCAACACAATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTACTCATATGCTCTATGATCAGTAGACAGCTGAAAAATAGGGGGAAAGTTGGAGAGGATATAAGATCTGATTCTGAGGATGAGGATTAG 1944 44.24 MEALSVPLYIIISLFLLAFFSISFLKRNEQPKSQEALKLPPGSMGLPWFGETLQLYSQDPNIFFSEKQRRFGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETLIGPAALFFHQGNYHSNLRKLVQNSLSLQRLRTTLVPHIEAAAISAADSWAATAHVFSFEVAIVAVFGKLETHYSEKLKENYCILDKGYNSFPTRLPGTACSKALSARKKLREILREIIVERREKEEAERDFVGQLLSYRDENGERLSEEQIADNVIGVLFAAQDTTASVLTWILKYLHDSFKLFEAVRAEQMEIYRRNGEGKMPLSWAQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYRIPKGWKVMPLFRNIHHNHDYFNDPHTFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLVTKFSGGIVGGNGVDVVKLQRFAIWLLNKGAAPLKLDEATQSKIVKCSESMWKLAYYGTVEICVLKIAYNQPWFRDSNQYFKGWPNAELQFFQIGSVILALHDASDVFMEAAKVFKYSENELGASVFFGCFAISWLILRLIFFPFWVIKATSYDLCEYLKLSDVNSRSIYYVFNTMLLMLLVFHIYWWLLICSMISRQLKNRGKVGEDIRSDSEDED 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6623302 6635276 + CmaCh19G006050.1 Cma19g00605 315293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00605 647 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Cma19g00605 647 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PANTHER CYTOCHROME P450 26 12 442 - -
Cma19g00605 647 SUPERFAMILY Cytochrome P450 37 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 SMART lag1_27 475 630 IPR006634 GO:0016021
Cma19g00605 647 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 12 442 - -
Cma19g00605 647 Pfam Cytochrome P450 40 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 Gene3D Cytochrome P450 28 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00605 647 Coils Coil 222 245 - -
Cma19g00605 647 Pfam TLC domain 520 622 IPR006634 GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01753 Cma19g00605 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g00840 Cma-Chr15:4252449 Cma19g00605 Cma-Chr19:6623302 6.67E-38 dispersed
Cma16g00505 Cma-Chr16:2597830 Cma19g00605 Cma-Chr19:6623302 2.90E-152 dispersed
Cma19g00605 Cma-Chr19:6623302 Cma04g01122 Cma-Chr4:5801740 1.07E-80 dispersed
Cma11g01753 Cma-Chr11:11674198 Cma19g00605 Cma-Chr19:6623302 2.49E-123 transposed
Cma01g01840 Cma-Chr1:12161356 Cma19g00605 Cma-Chr19:6623302 6.30E-155 wgd
Cma11g01752 Cma-Chr11:11648636 Cma19g00605 Cma-Chr19:6623302 0 wgd
Cma19g00605 Cma-Chr19:6623302 Cma05g00186 Cma-Chr5:803874 8.43E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00605 K09843 - csv:101219389 736.873