Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00641 ATGACTTCATCTTCTTCCTCAGAGCATCCACCGGCTCCCCCGTCTCTGAAACCCATCCCCGGCGGCTATGGCCTCCCCTTCTTCGGACCCATCAAATCTCGCTATGATTACTTCTACTTTCAGGGTAGAGAAAAGTTCTTCCGATCTCGAATGGCCCAATACGGCTCCACCGTGTTCCGAACCAACATGCCACCGGGCCCCTTCATCTCCTCAGATTCCAGAGTCATCGTCCTCCTCGACGCCCGGAGCTTTCCGATCCTTTTCGATACTACTAAGGTTGAGAAACGGAATGTTCTCGACGGAACTTACATGCCCTCCGTCTCCTTCACCGGCGGAATTCGAACCTGCGCTTTTTTAGACCCGTCGGAAACAGAGCACTCTGTTCTCAAACGTCACTTCCTCAAATTCCTCGCCTCTCGTCACGACAAATTCATCCCTCTGTTTCGAACCTCCGTGTCGGAGATGTTTAGTAAGCTGGAAAAAGAATTGGAAAAGACTAACGCCGCTGATTTCAACTCTGTTTCCGATGCGGCGTCGTTTGACTTCATTTTCCGGTTGCTCTCCGATGGAAAACCCGGTGAGAAACTCGGCTCGAATGGACACAGTTTGGTTGATCGATGGCTTATCATGCAGCTCGCTCCATTAGCCACTCTGGGTTTGCCCAAATTCCTCAGCTGCTTTGAAGATCTCATCATCCATACCTTCCCTCTGCCGTTCGCGCTCGTCAAGAACGCTTACAGGAAGCTTTACGATGCATTTTACGAGTCGTCGGAGACATTTCTAAACGAAGCCGAAAAACAGGGGATAAACAGAGAGAAAGCATGTCACAATTTAGTGTTCTTGGCCGGATTCAACGCATACGCCGGAATGAAAGTGTTGTTACCAATTATACTAAACTGGGTCGGATCCGCCGGTAAGGAGCTTCACCGGAAACTCGCTGGAGAAATCAGAGCCGCCGTGAAGGAAAACAGAGGACTAACATTCACCGCCATAGAGAACATGAGTTTACTGAAATCCGTCGTGTACGAGGTTCTGAGAATCGACCCGCCGGTGCCGTACCAGTACGCGAAGGCGAAACAGGACATTATAATCGAGAGCCACGATTCGGCTTTCGAGATCAAGAAAGGGGAGATGATTTTTGGATACCAGCCCATCGCCACTAGAGATCCGAAGGTGTTTGAGAAGCCGGAGGAGTTTATCGGCGAGAGGTTCGTCGGAGAGGAAGGGGAGAAGCTTTTAAAGTATGTTTACTGGTCAAATGGCCGGGAGACGGAGGAGCCGACGGCGGAGAATAAGCAGTGTCCGGCGAGGGATCTGGTGGTGCTGGTGTCCAGAGTAGTTTTGGCGGAGCTTTTCCTCCGTTACGACACGTTCACCGTCGAGGGAACTCAGTCGTCGTTGGGTTGGTCCGTTAAGGTGAAATCGTTGACCAAAGCCTAA 1440 50.97 MTSSSSSEHPPAPPSLKPIPGGYGLPFFGPIKSRYDYFYFQGREKFFRSRMAQYGSTVFRTNMPPGPFISSDSRVIVLLDARSFPILFDTTKVEKRNVLDGTYMPSVSFTGGIRTCAFLDPSETEHSVLKRHFLKFLASRHDKFIPLFRTSVSEMFSKLEKELEKTNAADFNSVSDAASFDFIFRLLSDGKPGEKLGSNGHSLVDRWLIMQLAPLATLGLPKFLSCFEDLIIHTFPLPFALVKNAYRKLYDAFYESSETFLNEAEKQGINREKACHNLVFLAGFNAYAGMKVLLPIILNWVGSAGKELHRKLAGEIRAAVKENRGLTFTAIENMSLLKSVVYEVLRIDPPVPYQYAKAKQDIIIESHDSAFEIKKGEMIFGYQPIATRDPKVFEKPEEFIGERFVGEEGEKLLKYVYWSNGRETEEPTAENKQCPARDLVVLVSRVVLAELFLRYDTFTVEGTQSSLGWSVKVKSLTKA 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6819021 6820910 + CmaCh19G006410.1 Cma19g00641 315329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00641 479 PRINTS E-class P450 group IV signature 334 350 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00641 479 PRINTS E-class P450 group IV signature 371 385 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00641 479 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00641 479 PANTHER HYDROPEROXIDE LYASE 16 460 - -
Cma19g00641 479 Gene3D Cytochrome P450 12 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00641 479 PANTHER CYTOCHROME P450 26 16 460 - -
Cma19g00641 479 Pfam Cytochrome P450 306 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00641 479 SUPERFAMILY Cytochrome P450 15 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01781 Cma19g00641 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g00501 Cma-Chr12:2599868 Cma19g00641 Cma-Chr19:6819021 1.97E-177 dispersed
Cma19g00641 Cma-Chr19:6819021 Cma14g01019 Cma-Chr14:5352933 1.55E-10 dispersed
Cma19g00908 Cma-Chr19:8223293 Cma19g00641 Cma-Chr19:6819021 9.58E-128 transposed
Cma11g01781 Cma-Chr11:11918812 Cma19g00641 Cma-Chr19:6819021 0 wgd
Cma19g00641 Cma-Chr19:6819021 Cma05g00217 Cma-Chr5:915909 1.41E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00641 K01723 - csv:101211574 804.668