Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00714 ATGCCAAAAGTCAGCCGTGGATATATAATAATCAAATCAGTTGCTGAGAAAAAATTTCAAACAATGTGGCTACAGAAAGGAAACGGTGTTAATGGCGGCAAAAAGGGAGGAGCAGGCGGAGGGGGAAAGGGGTTGGTGGCTATTGCTATTAACAGGGAAAAAGGAAGCCAAAATGCTATCAGATGGGCCGCCGAGCATCTGCTCGGAAGGGGCCAAAATGTGGTATTAATCCATGTGGTTCAGAGACCTTCCAGTGCGGCTGCTTCTTTGATTGGGGAAGCCATTATTTGTAACAGTGATGGCGGTTTCTCTGCTGATACCCCTCGGAAACAGCAGCTCGAGATGCAGACGAGGGACATTTTTCTCACCTTCCATTGCTATTGTACTCGCAAGGATATTCAATGCCTTGATGTTATATTGGAAGACACCGATGTGGTAAAAGCATTAAATGAATATGTCTCGTTCAAGACATCGAGCGTGGGAGGTAGCGTGTCGAAAGGGGCACCAGATTTCTGCACTGTGTATGTCATCTCAAAGGGGAAGGTGTCGTCAGTGAGAAATGCGTCTCGCTCAGCTCCCTCTTTTTCTCCTCTACATGACCATTTACAGAAATTATCCAAGCCAATCGTACAGGGAGCAATCACTCCTCGACATAAGTTTCTTCTAAGAGATAGGGCATCGTTCAAGCCTCGCACCATTCACGATGAATTAGTCAAGTCACCTATCTCTCACGGAGGAGAGAGAATTTCTATCACGAAATGTAGCGGAGGGTTCTTTGAGACAGAATCCGACATATCCTTTATAAGCTCTGGCAGACCAAGCATGGATCGTACTTCTGTTGCATACGACTACTCTGATTCAGCTCCCTCGCGATTTTCAACCAGTTCAGAGAGTAGCTTTACATCTGTACCATTTCAACCAAAATGGACAGACCTCAATAATCTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACACCATGTTCCTGGTCATCTCAGAACTTGGATGAAGCAGAACTTGAAATGAAGAGGTTGAAGCTAGAGCTTAAACAAACTATGGAGATGTACAGTACAGCATGTAAAGAAGCACTAACAGCAAAGCAAAAGGCAATGGAACTGAATGATTGGAGACGTGAAGAACAACAAAAACTAGAAGAGGCACGACTTGCTCAAGAAGCAGCAATAGCTATTGCAGAGCAGGAGAGAGCGAAATGCAGAGCAGCAGTGGAAGCAGCTGATGCAGCTAAGAGAATTGCAGAGTTAGAATCACATAAAAGAGCAAATCTAGAGATGAAAGCACTTAAAGAAGCAGAGGAAATGCCGAGAGAATTGAAAAATATTGCACAAAGTGACATCAGATACAGGTTATATTCAATTGAGGAGGTTGAATCGGCAACGGAACGTTTTGCACCATCTCGGAAGATAGGAGAGGGAGGTTATGGACCTGTCTTTCGTTGTCGTCTTGATCACACATCGGTTGCGGTCAAGATCTTGCGTCCTGATGCATCTCAAGGGAGGAGTCAGTTTCAGCAGGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTAGGAGCATGCCCGGAATATGGCATTCTAGTGTACGAGTACATGTCCAACGGAAGTTTGGAGGATCGACTCTTCCGAAAGGGGAACACCCCTGTTATTCCTTGGCAATTGAGGTTTCGAATTGCTGCTGAGATTGCTACTGGCCTTCTGTTTCTCCACCAGACAAAGCCAGAGCCATTAGTGCACCGTGACCTCAAGCCAGCTAACATATTGCTGGACCACAGCTATGTTTGCAAGATAAGCGACGTCGGTTTGGCTAGGCTTTTACCTGCTGTGGCCGAGAATGTAACACAATGCTGCATGACTTCGGCCGCTGGAACTTTCTGCTATATAGACCCTGAGTATCAACAAACTGGAATGCTTGGGGTTAAATCTGATGTGTATTCACTAGGTATCATGTTGCTTCAACTAATTACAGCCAAGCCGCCCATGGGGTTGGCTCACCAAGTCGCTCGCTCTATTGAGAAGGGGACTTTTCAGGAGTTTTTGGATCCAGCTGTGACTGATTGGCCAGTGGAACAAGCACTTTGCTTCGCTAAATTAGCACTTCAATGTGCAGAACTTAGACGAAAAGACAGACCAGATCTTTGCAATGTTGTGCTGCCAGAACTTAACAACTTGAGAGAATTTGGTGAGAAGAAAATGGAGCACATGGTGTCATGGGCCATTAGTGGATCTTTGAGCGGTTTTAGCGATGCCTCAATGGAGCAGGATATAATGAGCGACCCGCACCTAATGATGACTTCAGAAAGTTCCAAGGGCCAGTCTAGCGCATCGTCACAGGCAGGAGGAGACTGA 2385 45.62 MPKVSRGYIIIKSVAEKKFQTMWLQKGNGVNGGKKGGAGGGGKGLVAIAINREKGSQNAIRWAAEHLLGRGQNVVLIHVVQRPSSAAASLIGEAIICNSDGGFSADTPRKQQLEMQTRDIFLTFHCYCTRKDIQCLDVILEDTDVVKALNEYVSFKTSSVGGSVSKGAPDFCTVYVISKGKVSSVRNASRSAPSFSPLHDHLQKLSKPIVQGAITPRHKFLLRDRASFKPRTIHDELVKSPISHGGERISITKCSGGFFETESDISFISSGRPSMDRTSVAYDYSDSAPSRFSTSSESSFTSVPFQPKWTDLNNLNDFSSVSDESCRTPCSWSSQNLDEAELEMKRLKLELKQTMEMYSTACKEALTAKQKAMELNDWRREEQQKLEEARLAQEAAIAIAEQERAKCRAAVEAADAAKRIAELESHKRANLEMKALKEAEEMPRELKNIAQSDIRYRLYSIEEVESATERFAPSRKIGEGGYGPVFRCRLDHTSVAVKILRPDASQGRSQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMSNGSLEDRLFRKGNTPVIPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHSYVCKISDVGLARLLPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPPMGLAHQVARSIEKGTFQEFLDPAVTDWPVEQALCFAKLALQCAELRRKDRPDLCNVVLPELNNLREFGEKKMEHMVSWAISGSLSGFSDASMEQDIMSDPHLMMTSESSKGQSSASSQAGGD 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7264273 7269426 - CmaCh19G007140.1 Cma19g00714 315402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00714 794 ProSiteProfiles Protein kinase domain profile. 471 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma19g00714 794 CDD STK_N 45 180 - -
Cma19g00714 794 Coils Coil 330 357 - -
Cma19g00714 794 SMART serkin_6 471 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma19g00714 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Cma19g00714 794 Gene3D HUPs 45 159 IPR014729 -
Cma19g00714 794 PANTHER BNAA05G18880D PROTEIN 42 773 - -
Cma19g00714 794 SUPERFAMILY Protein kinase-like (PK-like) 451 729 IPR011009 -
Cma19g00714 794 Pfam Protein kinase domain 474 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma19g00714 794 Coils Coil 375 403 - -
Cma19g00714 794 Gene3D Phosphorylase Kinase; domain 1 449 543 - -
Cma19g00714 794 PANTHER OS02G0152300 PROTEIN 42 773 - -
Cma19g00714 794 Gene3D Transferase(Phosphotransferase) domain 1 544 752 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g00935 Cma-Chr12:7273296 Cma19g00714 Cma-Chr19:7264273 0 dispersed
Cma19g00714 Cma-Chr19:7264273 Cma12g00651 Cma-Chr12:3436563 0 dispersed
Cma11g01405 Cma-Chr11:9232327 Cma19g00714 Cma-Chr19:7264273 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69338 PF00069 Pkinase 5.20E-41 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00714 - - cmax:111468498 1407.51