Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00758 ATGGTTATGGAGGATAACGAGAGCTGTGGAAGTAGAGCACACGACTCGTTGTCGCCGGCGCAGAGTCGGCAACAGAGACAGAAGTTTGAGGTATACAATGAGGTTCTACGGCGTTTGAAGGATTTAAACAACGAGGAGGCTAATCAGCCTGGTTTTGACGACGAACTATGGGTTCACTTCAATCGTCTTCCCACTCGATATGCTCTAGACGTAAATGTGGAGAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATTTGCGCATGATCCTGCAAATCGACCTGCAATTGAAGTCCGCCTAGTGCAGGTCCAGGCCATTTCTGATGGGAATTCCGCTGACTTTGCTGATTCATGTTCTGTAAAAGACACTGACCATAATTCTGCAAATTGCTTGAGTAAACAGAGCATACATCCACCACCTGCCTTTGGGTCATCTCCCAACCTTGAGGCCTTGGCCCTTGAAGCTAATAACGCTCAGGATCTGGAGGTTGATCATTCTGTACATGCCAGAACACAGTTTTCCCGGCCGATGCATGAAATAACTTTCTCTGCAGATGATAAGCCGAAACTTCTCAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAGGAGGCACATGCATTTTCCACTGTTGACGGTTACTCATTGGACGTTTTTGTAGTTGATGGGTGGCCCTATGAGGAAACAGAACGATTGAAGACTGCATTAGAGAAGGAAGTCTCGCAGGTTGAGAAGCGGGCTTGGCCAAATCATAAATCCTCGTCACCTGTTGAGGGACAAGATTTAACAAATAAATGTGAGCCTGATCGAGTGGAAATTCCCACAGATGGGACTGATGTATGGGAAATTAATCCTAGACATTTGAAGTTCGAGCATAAAGTTGCGTCAGGTTCATATGGGGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTGGCTATTAAAGTTCTCAAAACTGAACGTGTAAATTCAGATATGCAAAGTGAGTTTGCCCAGGAGGTATATATTATGAGAAAAGTCAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGTACGAAGCCCCCAAGCTTGTGCATTGTTACTGAGTTTATGTCTGGTGGTAGTGTATATGATTATCTACATAAACAAAAGGGAACCTTTAGGCTTCCAACTTTGCTCAAGGTAGCCATCGATGTCTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGAGATCTTAAGGCTGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGTGTTGCCAGAGTGAAAGCTCAATCAGGAGTTATGACCGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTTGGAATTGTCTTGTGGGAGCTGCTAACTGGAAAGCTGCCTTATGAATTCCTAACCCCATTACAAGCCGCAGTTGGAGTGGTTCAAAAGGGTTTACGACCTACTATTCCAAAGCACACTAATCCCAAGCTGGCTGAGTTGCTAGAAAAATGTTGGCAGCAAGATCCATCATTGAGGCCGGACTTCTGTGAAATTATCGATATATTGTTGCAGATAACTAAGGAAGTTGCTGAAGACGGTGACGAACGTCGAAAGGAGAAGAGTGGAGGGTTCCTTTCAGTGTTGAGACGAAACCTTCACTGA 1722 44.25 MVMEDNESCGSRAHDSLSPAQSRQQRQKFEVYNEVLRRLKDLNNEEANQPGFDDELWVHFNRLPTRYALDVNVERAEDVLMHKRLLQFAHDPANRPAIEVRLVQVQAISDGNSADFADSCSVKDTDHNSANCLSKQSIHPPPAFGSSPNLEALALEANNAQDLEVDHSVHARTQFSRPMHEITFSADDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETERLKTALEKEVSQVEKRAWPNHKSSSPVEGQDLTNKCEPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKTERVNSDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPTLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLAELLEKCWQQDPSLRPDFCEIIDILLQITKEVAEDGDERRKEKSGGFLSVLRRNLH 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7517998 7526987 - CmaCh19G007580.1 Cma19g00758 315446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00758 573 ProSiteProfiles Protein kinase domain profile. 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma19g00758 573 SUPERFAMILY ACT-like 179 247 IPR045865 -
Cma19g00758 573 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 555 - -
Cma19g00758 573 CDD STKc_MAP3K-like 299 542 - -
Cma19g00758 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Cma19g00758 573 PRINTS Tyrosine kinase catalytic domain signature 367 380 IPR001245 GO:0004672|GO:0006468
Cma19g00758 573 PRINTS Tyrosine kinase catalytic domain signature 404 422 IPR001245 GO:0004672|GO:0006468
Cma19g00758 573 PRINTS Tyrosine kinase catalytic domain signature 450 460 IPR001245 GO:0004672|GO:0006468
Cma19g00758 573 PRINTS Tyrosine kinase catalytic domain signature 469 491 IPR001245 GO:0004672|GO:0006468
Cma19g00758 573 PRINTS Tyrosine kinase catalytic domain signature 513 535 IPR001245 GO:0004672|GO:0006468
Cma19g00758 573 Gene3D Phosphorylase Kinase; domain 1 283 371 - -
Cma19g00758 573 SMART serkin_6 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma19g00758 573 Pfam Protein tyrosine and serine/threonine kinase 293 541 IPR001245 GO:0004672|GO:0006468
Cma19g00758 573 CDD ACT_TyrKc 179 245 - -
Cma19g00758 573 Coils Coil 231 251 - -
Cma19g00758 573 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 15 555 - -
Cma19g00758 573 Gene3D Transferase(Phosphotransferase) domain 1 372 564 - -
Cma19g00758 573 MobiDBLite consensus disorder prediction 1 26 - -
Cma19g00758 573 ProSiteProfiles ACT domain profile. 181 253 IPR002912 -
Cma19g00758 573 MobiDBLite consensus disorder prediction 12 26 - -
Cma19g00758 573 SUPERFAMILY Protein kinase-like (PK-like) 278 542 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01359 Cma19g00758 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00727 Cma-Chr2:4409860 Cma19g00758 Cma-Chr19:7517998 5.60E-48 dispersed
Cma04g02442 Cma-Chr4:16801769 Cma19g00758 Cma-Chr19:7517998 3.10E-170 dispersed
Cma06g00139 Cma-Chr6:708474 Cma19g00758 Cma-Chr19:7517998 0 dispersed
Cma15g00604 Cma-Chr15:2857022 Cma19g00758 Cma-Chr19:7517998 6.43E-167 dispersed
Cma16g01259 Cma-Chr16:9497182 Cma19g00758 Cma-Chr19:7517998 0 dispersed
Cma19g00758 Cma-Chr19:7517998 Cma12g00938 Cma-Chr12:7297489 3.13E-86 dispersed
Cma20g00331 Cma-Chr20:1618345 Cma19g00758 Cma-Chr19:7517998 1.34E-47 dispersed
Cma01g01992 Cma-Chr1:12796667 Cma19g00758 Cma-Chr19:7517998 0 wgd
Cma11g01359 Cma-Chr11:8997615 Cma19g00758 Cma-Chr19:7517998 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69339 PF07714 PK_Tyr_Ser-Thr 2.20E-74 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00758 - - csv:101213048 1078.16