Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00866 ATGGCCACCTCTGCTATCCAACAATCCGCCTTTGCAGGCCAGACTGCCTTGAAGCAATCCAATGAGCTTGTCCGGAGGGTCGGCACTTTCGGTGGCAGCCGCTTCACCATGCGGCGGACAGTCAAGAGTGCTCCACAGAGCATATGGTATGGGGCAGATCGCCCGAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCTGGTGACTATGGATGGGACACAGCCGGTCTGTCAGCCGATCCCGAAACATTCGCGAAGAACCGTGAGCTCGAGGTGATCCACTCCCGATGGGCCATGCTTGGTGCATTAGGTTGTGTCTTCCCTGAAATCCTTGCAAAGAATGGTGTCAAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTAGATTACCTCGGCAACCCAAACCTCATCCATGCTCAGAGTATCCTTGCAATCTGGGCTTGCCAGGTTGTGCTGATGGGCTTTGTTGAAGGATACCGGGTTGGTGGCGGTCCCCTTGGTGAAGGACTAGACCCAATTTACCCAGGAGGTGCCTTCGACCCGCTCGGATTGGCAGATGATCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCAATGTTCTCCATGTTCGGATTTTTCGTCCAGGCTATTGTCACCGGAAAGGGTCCTGTTGAGAATCTCTTTGACCATGTTGCAGATCCTGTTGCCAACAATGCATGGGCTTACGCCACCAACTTCGTCCCCGGAAAATGA 798 52.38 MATSAIQQSAFAGQTALKQSNELVRRVGTFGGSRFTMRRTVKSAPQSIWYGADRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHVADPVANNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8059990 8061737 + CmaCh19G008660.1 Cma19g00866 315554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00866 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
Cma19g00866 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Cma19g00866 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Cma19g00866 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cma19g00866 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED 1 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma19g00866 Cma-Chr19:8059990 Cma07g00128 Cma-Chr7:661812 2.34E-150 dispersed
Cma09g00012 Cma-Chr9:81081 Cma19g00866 Cma-Chr19:8059990 8.21E-64 transposed
Cma11g01288 Cma-Chr11:8614659 Cma19g00866 Cma-Chr19:8059990 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00866 K08913 - csv:101212963 536.954